XLOC_042089 (gene) - C. hemisphaerica

Overview
NameXLOC_042089
Unique NameXLOC_042089
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_469:514543..518854+

Legend: transcript
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_042089 ID=XLOC_042089|Name=XLOC_042089|organism=Clytia hemisphaerica|type=gene|length=4312bp|location=Sequence derived from alignment at scaffold_469:514543..518854+ (Clytia hemisphaerica)
TGCCATTCACTTGTTTGACCAGTTGACTTTATTTACGTTCCAAATCttga
agaaaatttcataattttaaagaaattttcatttcgaaAATTCGATGAGT
CAGGGTGCTACTACTTTTTAAACAGCATCGTAGCAATGAAGGTTGTGGTT
TTGAGTTTTGCTTTGATTGCAGTAACCTGTGGGTTTGATGGTAAGTTTTA
CATACTGGACCATAAATCTCACGATGGGAAAAGAACTAAAGCCcttcaat
gttttgattaaGAAAGGCAAAGGGAAACTACTTCTGAAAACATTGTTGAG
TTGCCATGAATTCCCTTTACTATAAGTACACACAATGTTCAGGTTCAGCA
CAAGTGAAAGATGATTGCTTATTGGCTAAAATGGCTAAAAACAAGGGCTT
GTTGTTCACGCCCATATTTAGATGACAATGTAGGTCAGTAGCGTGGTTGG
TCGACTAAAATTCGGGCAAACAGAATATAAGAAAGAATATATCTTTTTAA
AATTACGTGATCGAAGCGAGCACAAAAATGTTAGGGTATTTTTTCTCTCT
TGTATTCCAGCACCCCTTAAAAATATCGGCCGCCGATGCCAGGCTACTGA
TGGTGACCAACTTTTCTTGCGTCATCAATTTCAGTTCATCATTCACCTCT
TCTATCCATAGTTTGTGATGATTCCACCAAAAGATGTGTTTTATGGAAGG
ACAAATGCAAATTGCCCATGTACAAATACTACATGGAGTTGAATTGCCGA
AAAACTTGCGATTTGTGCCCAAGTAAGCAAAGAACATCTGTTTTATTGCC
CTGGTTCGATTATTTACACCCTGCGAAAAGACTAAATCATTCGAATCCTT
GATCATTGATGCTATATCCCTTTTCAAACGACAAAGCTATATGACCTTAG
CCCATCTGAAATGAGCACTTTTAAACTCAGTCAAAAATGACGGCTAGTTG
GAAATCATTACACCCGGAAGGGGCTAGCTGACGGGAGGGGGTGCCACCCG
ACTTTCGACTCCTGGACCCTTACCGgaactaaaaaagagaaaataaaggg
AAATGTCTTGTGAATttttgggacaaatttgaccaattttgacccaAATT
CCaatctttccgggggtaaaaaccCTTTGtgggattgaaatttgattttc
tgatttttccgacccttagcgggactttgtaaatccaaaaaaggtaccct
taagagcagcacataccgtaccctccatttgcctaagtaccctccCGGTC
ATTACATGATGTTTAATATGAAGCTTTCTATTACTGTGCTCAACTCATTT
GGAAACGCACGGGTGCACGAGATTTGTAGATTTACGgattcgtgatattc
atgacgtaatgtttttacGGAAGCACCTGAGAAATACCGGATGGCTGCCA
CTAATTTCTAATTCATCAAACAATAAAGCTAGTGGCAAATGCCCGAATTA
TTTCGGGTGTTTCTGTATAAAacaattcaatgtttaaaacaTGAAATGAA
AGAAACCCTCAAATTAGATAAACGTTTTCAatttaaagtcattttgaaat
tctttctgTTTTACAGAATGTGAAGACAAAGTACCAGTTTGCGATGCCAG
CAAATGTTTGGAAGATTTTGATTATAGCCGGCTTAATTGTGCAAAGACCT
GCTTGTTCTGTTCTGGTAGGTAGAAAGCAACACAATTTAATATGTCCTGC
TATTGGAGGATGTGTCTTTTTGTTCCTGCAAGAAACCATACCATACAAAC
TTCTTCTTTTAAGCGGTCAAATCAACAATTTACACTAGCACTTGTAattg
tttcaaagttttcatttcTGCCCGGACTTTCTTTCCGAGCAATTAAAGAA
TCAGAACTTACTCGCTTTCTTCAGCACTGCCGTAGCATTGTGGGTTCGAA
CTCCCTGCCCTTGATGGATATAAAGGATTTTCGATAGCCTCTCTACTTGA
TTCCCAGTAATTAAAGATATGATATAGGGctagtggagaaatccagggaa
aggagtggcgccctcccttACCTTGATGTAGACAGATAAAGAAAAATGAG
CCTTCTGGACATCTCCGACTGCGGTTGCAAAATTACTTTAACGTTCATAC
ATTCGagtaattttatttgaaattgttcAAGTATACGTTCGAATAAAAAG
TTCAAGTAAGAACTCTACTTTAACATTAGTATTTAATATTAACATTTATT
CAGTGCTTTTCAGTAATCATTTCCTTTTTTGCTTCCttcattttctactt
tttcattttcagtaccAACCACAATGCCGCCCCCACCACCCACGCCCACA
TGGAAAGTCAAACCTGCAGGTAAAGTTCTCCACTCTCCTCTTTTAGCTAA
AAAGAGTTTGTgttaaggtcccgaatagtagggggTCCGAATAAAAGGGG
GGTGTCCgagattttctcaaaatctaataaaaggGGGTCAAAATTGAAAG
GAGGGGTCCAAAATTGTACTTCCAAAAACCGCAAAAAAGGTAATTACAAG
CTGAAAAAAACTATGTAAAGTAATTCAGCTTGTGATAGctgaaaaaaagg
aattttaataACCGAGTGAGGACGTTTATTCGGGGCCTTAGAGTACCTCC
TTAGATAGTTACACCGTAACGTAGAATTTTACTGATGAATATTTTAACAA
CTTTTCCATTGTTTAGGTGAATGTGGTGTGAAGCGAGCAGGAAGTCGAGT
CATCAACGGAGTAGATGCGAAGAGAGGTGAATGGCCCTGGCAAGTGTTGA
TCCGTTTCCTTGGTGACACGCACTGTGGTGGTTCCATCATTTCACCTTTC
TGGGTAGTGACAGCTGCTCATTGCGTGGACAAAAGAGAAGCTCTCATAGA
TGAATTCCAAGTCGTGTAagtgacgctctctaattcgacgttcatATATT
CGATAAGCTCCATCATTCGATAATATTTAAAGCCATCGCCAACCATAAAC
TGTTATAAACGATCCCTTTCTATTCGATACGCCTCCTTATTCGATAGAAA
ACGAGTTCCTCGTAAAAGTCAAATTAGAGAGCTTCAACTGTAGTTTCAAT
TGCTCGTTGAATTCTTACCCTATCAAGGTTTGTATTTCTCCTGGGGGGGG
GAGGGCagataatattttcaaagatgTTTTCTTAAAGACGACTAATCaag
attcaaaaaattaaagaaaatataaagtttttacTTGGATTCATTGATTT
TTGGTGTATCTTCCAGCAATGTGTAATCTTTCGGTCTTGCTAATGACTTA
TCTTAAGGATTAACTAGACCAAAGAATTTGGAGGAATATTTGAATCTCAT
AAAACTTATTGCAATCAATCCATGATTCCACTTATTGAGGTAAAATATCA
TTTTGACAAAAGTTAAAGTTTCTTGTAATATTTATTGTTGTTGCACCAAC
AACAGTGCACAATCCAACGTTTTTTAACCGTCATCACTTTCAGTGTTGGT
GAGCACGATTTCGACAAGCCCGAAGGAACCGAAACTTCCATCGGAGTCAG
CAAGATCATCAAACATCCACGATACAGCACACCGACACGATTCGATAAAG
ATATCGCTCTTCTCAAGTTGACTCGGCCCATTCCCTTCGATAATTTGGTC
GGAACTGTCTGTTTACCGGAGAAAAATCGGCCGGTGCCTGTTGGAACCAA
ATGTTTCATCAGTGGTATGTCTCGATAGTTTTGTTCAATAATTTGTCTCG
ATAGTTTTGTTATCCAAATAATTTGTCTTGATAGTTTTAAGCTCTTCTTT
TTGAAATTGGAAAGGTTTTCTaaatcaactttgaactttAGATACCTCGC
AAGACAGTCTCTTTTTCAAACGTACACATATTTCTATACTTTCCCAAATC
CTACAACTAGAAGAACCACCATTACAAACGCCTTACAATGCCAAACGATT
TGtagatacagttgacgctctctaattcaacattctactattcaatacac
tccattattcgataaaaatctAATTCcaccttgaaaatcgaataagagat
CGTCAAATATATTTGTCTTCTCCCCGCTATAAGATGTTGAACGTCATTCT
GTAGGTTGGGGAAAGATCCATGCATGGGACAACATGTATCANAGGACAAT
CGTTTCTGTACCTCTTCGTAAACTTTAGTAATAGTCCTTGTTGTCTCCTC
TCCGTCCGCCCTCTGTTCATCTCCTTCTTCGTCTTCTTTGTCCGAACTGT
CCGAACTTTTGTCCGAATcatcatcttcttcatcttcttcttcttcttca
gcgAAAATATGAGAAGGATCATGTTGTGGTTCGAAAGGTTTTTTGGCGAA
ATCAGCTGGTCG
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00067355TCONS_00067355Clytia hemisphaericatranscript
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_469supercontigscaffold_469:514543..518854 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.04	0	0	0	0.1	0	0.59	0.97	2.47	4.44	8.63	1.29	86.23	100.43	0.21	0.6	32.71	37.94	258.97	240.6	126.94	141.44	71.42	80.35	152.59	218.8	1.63	1.32	0.55	0.27