XLOC_042141 (gene) - C. hemisphaerica

Overview
NameXLOC_042141
Unique NameXLOC_042141
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_47:248914..254985-

Legend: transcript
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_042141 ID=XLOC_042141|Name=XLOC_042141|organism=Clytia hemisphaerica|type=gene|length=6072bp|location=Sequence derived from alignment at scaffold_47:248914..254985- (Clytia hemisphaerica)
AAATGTGACACAAGTGGATCGGAAGTCTTTCTGTTCGTCAGGTGATTCCC TGATCTCAAACCTACAAGGAATCACCACTCTCGGAATCAATAACATCAAA ACGATAACTCAAGGTAAGACGTTATGATATTTGTCCTCTCAGTGTTCAGA AAATTCCCTCTAAAGAATTCCCCGGTAAATCTGCCAATAAGTTATCGGAG AACTATAATTTCATTTTAGCAATTAATTGGGATTAGATTAGATTCAATGT TGGTAAGCTACCTTTAGATAATAAATATTGATAACAAGATGTCTAAGTTG TTCCAGATCGCGAAGGATTCTAGATAAAACGACATGTGAAGCTAGCTCAT ATATAGTAAACTATCGATCAAACACTAATATACGCAAATAATTGGTCCTT TATTAGATTGTTGTCCAGCAGACACAGTTGGCGAGGAATCATTCAAAGGA GTTTACAATTATAACGTCACTCTAGTCAACACAGACGTCCGCCAAACTTG TGTTTACTCAGCGTCTTCGTTAAGCGCACGACAATGCATCCAAAACTTGA AGCTTGGTCCTCAATGGGGTGAAGCAGATCTTGAACAATGCTCTGCTAAA AGTGATGTAACAAATCAACTCATTGAGCTGACAAAGGTATATATTGCCTT TTTCATATAGCAGTACTATTTTGTATCCGCGTATTTTTTTTTGGTGAAAT TATCAAACATTTTAAGATTTTATTGATGACTAGCTTAATATTTTCAGTGC CTAAGTGGATTTTCTCATGTAACATCCATTTTCGCCAATCTTTATTTTCC TGGACTTCATTTCTTTGTTACTACTTATCGATTCTGTTATAGGAATTGAC TTGTACAACGGGTAACTGTACGCTAAACGTTGTGAAAGTGACAGAGAATC TTCGTGAGATTGTCAACAACAATACAGCTATCACAACCAGACAGGATCTT GAATTCATCGCTGACATTGTTGGCAATACTGCAGACTCCAACACAACTAG CAGTGAAACTAAACTGGTAATTTACACCATTCGTCATTCATTAGCAAAAG ACAGGCTCAGCGTTTTTTTACCACTTACCACAATTAACCTTTCACGCAAA CCCCTCACTTGATCTAACGTTGTTGTAAAAAGATGACGATAGATGATAGA ATGATAGAAAATAATGATACAAACCAGAAAAGCGTCCGAAAAAAGTGTTC GCCGTAATGTATTATCATGTCTTCTAAATTTTCTTCCTACGCGCTAGAGC TCTGAAGGTTGGGAAATTTTCAATATCTTGAAGGGTTTACATTATAGAAT TTTACCAGAATGCATCAAGAATTTGTGGGGTGTGGGAAGCCTAAACTGGG AATTTGTGGGGTGTGGGAAGCCTAAACTGGGGATTTGGGATTGTCGGGTC CAACCAAAATAATCTCAGCCTTACGCAGAAGGGGATCCCGATTGATCCCG ACTGGGGATGCGGCACATAGGAGGCCGACGATCATTCTTCGCGAATGGAA GATTGAACCGCTTCTTCAGAGTTTTAGCGCGGGCGGCCATCAATCCACCA TTGGATTATCAGAAAATCGTTGATCTAAGTGTCAAGCTTCTTCCTAACGA ATGATAAGTGAATAAGGTTAAGGTTATGATTTAAAAAAATGAAAAATGAC CTTATTTTCGGTTTTGTTTTAAAAGGGTGCTGAAAACATTATGAAGACTG TTGATGTGGTAGTAGTCTCTGATAAAAGTATCATTGCAGAATCGGAAGAA AAGACTCAATCGTCCACAAAACTTGTCAAAAACTTAGAAAAGTTGACATC AGCCATCGGTAAAGTTGTGGAGGAAACTAAAGAACCATTCTCAGTGACTG GTGAAAATACAGCTCTGATTGTCAACTTTGAGCCTCCTAAAGCGCTGACA CTTATTGCAAGAGATCTTACATCCTCTGACAATCAAAATGAGATAAACAT TGCTATCATGAACAGCACCACATCGCCACCAAAAAAACGACCATCATTGG TTAGAGCTGAAATCCCTGCCGAAGCTTTTGGTAACAAGAGTCAAGCAGTG TCGTCACTTATCTTCAGAGAAAACACCTTGCTACAGGAAACCAATAACAC CAACCCAGTGATCAGCTCAGTATTAAGCATCAGTGTTGGTGATCAACCAG TATCTAATCTCACAACACCATTGATTCTTCGCTTTCAACGAACAACTCCT AATGAAACATTGGATGGAACAGATCTTTGCTCCTTTTGGGATTTCTCAGC TTGTAAGTTCATGTTTAATGGTGAAAGTAGTGAAGAAGAGAGTATCTAGT CCAATTGTCCAAAATGACTATACAACTCTCGCTAATTCGAACTTTGATTT GTTCGAAATGCAGGGAGATTCGAATAATAGAAGTTCGAATTAGAGAGAGT AATAAATTATCTTAAAACGATGAACATATTGCACCCATTTCCATGATATA GTTTTATTGGGATTTCACATTTTATTTGAGCCAAAAGGTGATTAAACCTT AGCTAAGTAAGCCCCAAACTTAGCTTAGGTATCATGATTAACACTGTGAT TAATACTAATTCGAATCATTTACTCCTCATTACCCATTTCTAGCGACCGG AGAGGCAGGTCGTTTTGGTCGTTGGAGCACGGATGGATGTCGGCTGATAG CCAATCAAACCACAGCAACTGATGTCGTTTGTGAATGTGATCACATGACC AACTTCGCCATCCTTTTTGACGTTTCACAGACGCAGAGCAACCCGTTGGA GCTGCAAATTATCACGTGGATAGGTTGTGGAATCTCCATCGCTGGGCTCT TCATTACACTGGTCACCTACCTGTATTTCTAGTAAGTAGTTTTTAATTTC GTGTGTAGGAGGACAGAAGAAGTTCTGAATTCTCGATGTAAAATTTCAGA CTATTGGTATTGGAATTTGATTAGATTTAAAGGTGATTGCACATTTATTG AAAGAAATGAAATGATTTTCAAGCGCGTTTGAATGGAAGGATCCCGAACC TCCTAGATTGATTCTCTAATTTGTAACAAATGGAATGGGAATTAAACCCA TAGTCTCAGGTGCCTAAGAAACGTACTGTACGTTTATTAATTTCAACAAA CATTATTTACCCCCTAACCTAACCTGAAAAGACCCTTCAATCAGATTTTT ATGCCTTCATTTTCAACTCTGTACGTGTATTAGGAACTCGAGAGTAACCC CTCGTTTTTCAGATTGAAATTATATTTATTTCCCTTTCCACAGTAATTTA CGAACGAAGTTAGCACCAAAGATTTTGATCAATCTCTCCATCTCTATGTT GTGTTTGCTGATCCTCTTCATCTCGGTGGTGGATCGCACCACGCCCAGGG TCGGTTGTAAAATCATTGCTGGTCTCATCCAGTACTTCATGCTCTCCACT TTCTGTTGGATGGCTGTGGAGGGAGCCAACTTGTATCGTATGTTCGTCAC CATCTTCTCCAGTGGAAGTACTGGCAAATTCTACAAAAAAGCTTCCATTT TCGGATGGGGTAAGTTTCCATACACACCAACCTTTTAGTTAGTGATTAGG AGAGGATTTGCTTCAATAAATTTTGATTCAACTTCACCGCATTCTCGTTA TCGTTTTGAGAATATTTTAACGAAAGTTAATCCTGGGAGAGCCAATATTT CAAAGCTTTTAAAAGGTTTTTCCCAAACTGCCAATCACAAGTACCTTGAC CTTTGTTCCTCTCTTCACAGAGATGATAGAACTAAAACTTCATTCATTGC AATAATGCTAATCTTTTCTCGTTATAATCGTTAGGTTTACCAGCATTGAT AGTAATCATCACAGGAGCAGTGAGTCCAGAAAACATGGGGAATGAACAAT TGTAAGTTTTGGTTATCTTCTTCAGTTTTGTTTTGGATGATTCGATGCTC ATTATCTATCGGTGATGTTGAGAACAGTAGGGGCTTACAATCATAAATGA CGATTAAGGATCAACAAGATTTACCCCCACTTATTTTGTGTTTTTATTCT CATGTCTAATTTTAGTTACAAACAGAGGCCGGCTCTCCATACTCTGGAAA AAAGTCCTTAATTGAGAGTAAAAAATAGGGGGATAGCAATATGTTAGGGT CTTAGCACGAAACTTTTGGCATTTGTATTATTCATATTCATTTTAGTTGT GTGACGGTTGGTTATCCATTTTATTTCGCCGTCCTCCTACCCGTATGTCT CATCTTGATGTTCAACTTTGCCATTATCACACTGGTCATGAGATCGTTGG TCAGAACTAAAGCAAATGCTGTTGGTCAAGGGAAAAGTATTCAACAACAA GCTAAGATTGCTTTTGCTGCCAGTGCCTTATTGGGTTTGACTTGGATCTT TGGTGTATTAGCTGTTGGTGATCTGAGAGATTTCTTCCAATATCTTTTCA CCATCTTCAATTCACTTCAAGGATTTTTCATCTTCTTCTTTTACACACTA AGAAATCCTGAAGCCAAGAAGAATTGGTTGATAACCCTCGGTTTAAGGGA TGAGAAACTATATTCATTGACGGATTCAACTGCAGCTTATAATAGGCAGC GTAGGACAGGTAAACTAATTACTTTTTTAAATACTATACACGATATTGAG GAACATCTAATCGAAAGATCTTGACACCGGACTGACTCAAAGGCTAAGTC TCCTAAGTCATTTTGAAATTCAAGTAAGGCCATAGGTTTTTGGGTTTTGG CTCCCATCTGGAATTTCTCAATATCAGCTCTTCTTCGTTTATTTAAGAAA TTAGAGATAGTTTGTCGGAATGTAAATATATAAAGGGAATGGTTCAACGT TTATTTTTGTTACCAATTAAGATCTTAAACTGTTGATTTCTCTAATCAGC TTGATTGAAAATGGAGGTATTTCTGTTTGTTTTTTTACAAATTTCAATTC TTTATTTTTGTTGTAGGTGCTGGCACATCGACGAGTACAAGTGTTTACGT TTCATCTACCTCTGCTTGATGACTGTACACAAAAATTAGAAACCAAATAT TTTTATAAATTTTCACTGCACATGAAATTTTTCTTAAAGATTTTTTCTCC ATAAGTTTTTCATAATGGGGCTTTGTAGATATTTTAGAAACAAATTTTAA AATCTATTATAACAAATTTTGTACCGAAAATTATTTCTTCATTAGAAATT ATTTATAAATATTTTTTTATGCTTTAGGTAAAATTTTAATATTTTTTCAT AAATATTTTTTCGAAATTTTTGTAACTGATAAGGCAGCAATTTGTCAAAT TGTCAAAATAATTTTTTTTGGAAAGCTGCACCTCCCTCAAAACAAAAAGC ACCTTTTATAGTTTAACATTCATGAAATTTAAAAATATCTTTGAATAAAT AAAAAGAAATTTGAAATTTCTGTTTGGGCAGACGACGATAATAATTCTTC CTTTAAATTCCACCTTTGTTTTTTTTGCTTCTTTTATTTTTCAAAAAGAG AAGTGAAAACAAGATGATATCAGACATCAGAATTTCAGCAGTTTGGATAC CTGATGTAAATTATAAGGACGAATAGAAAAAAAGTGTTTTCTTTAATCTT CAAAAGAAGCATTGAAAAAGTGAAGAAAAGTATACAAAATCCGTGTTTTC AAAATATGGAAATTTATCGCTATTTTATTTCATTTTTCTCTTCTTCATTT AGGAAGGAATGAAATTAGTCAATTTTTTGTTGAGTTGAAGAGAGGGGGAA AACAAAGCTTTCCTAACAAAAAAATTAAAGGACNAAAATTAGAAACCAAA TATTTTTATAAATTTTCACTGCACATGAAATTTTTCTTAAAGATTTTTTC TCCATAAGTTTTTCATAATGGGGCTTTGTAGATATTTTAGAAACAAATTT TAAAATCTATTATAACAAATTTTGTACCGAAAATTATTTCTTCATTAGAA ATTATTTATAAATATTTTTTTATGCTTTAGGTAAAATTTTAATATTTTTT CATAAATATTTTTTCGAAATTTTTGTAACTGATAAGGCAGCAATTTGTCA AATTGTCAAAATAATTTTTTTTGGAAAGCTGCACCTCCCTCAAAACAAAA AGCACCTTTTATAGTTTAACAT
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00067477TCONS_00067477Clytia hemisphaericatranscript
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_47supercontigscaffold_47:248914..254985 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
2.98 2.51 2.44 1.32 0.17 0.17 0.2 0.43 0.32 0.46 0.46 0.38 0.37 0.37 0.96 1.94 5.07 4.7 0.63 0.63 6.54 5.44 4.57 6.03 14.89 15.97 25.28 32.28 2.15 1.31