XLOC_042339 (gene) - C. hemisphaerica

Overview
NameXLOC_042339
Unique NameXLOC_042339
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_476:7303..14354+

Legend: transcript
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_042339 ID=XLOC_042339|Name=XLOC_042339|organism=Clytia hemisphaerica|type=gene|length=7052bp|location=Sequence derived from alignment at scaffold_476:7303..14354+ (Clytia hemisphaerica)
ATAAAAAGTCTACCACTGGTAGCCAGACAGCAGCTCAGCAAATATCTTAC CAACGAAGCTTTTCCAAGGACAAGACAACTGACAaccaaaatgatgaaat taattttcttgaCGATTGCCTTCATCGCAACAGTTTCAggtatgtctttt tttactttaagCCTGAAGAGGCTAGAGAGTAATTTTCTTAGGGGATGGGA AATAAAGCAAGTcttctacacgctttttttttataagaatatcttctata agaatatcagggtgaaaattggccaaatcctaaaaataccctctagggtg agtttcacagaatttgatcattgtatttggttaacagaaaaagctgcttc ctttgttagagataaattgaagctttgaggaagaaatgtaatttaaccca aatgttcactcaaaagttcaaaactctcaaattgatcaatTCTcatgtac cttaaaggaagaaattttggcggaaagaaaatttggcggatttggcggat ttaactgaaatccgctaaattaaattcccgccaaaatttcttcctttaag gtatgcaaaaaagtcaagtctaaaaaagtaagaatacgttaagaatattt caccctcaattttggcacatTCTTAAGAATAAAggacactattcttataa aaaagcgtgcattTTCCATCCAAAACGAGTGACGAAATTGGTTTTCAACA AGCGCTATGTATTAAGTAAGATAAAACGAGAAATGCAccacgtaaaaaaa aacaaaaaaaaaaaaacgctaGATTCAATAATCCAAATGCGACAGAGATC TTAAGGCTTTCCTTTTTTCTTGCGTTGAAAAGGTTACAGATTCCTATCTA GCNAAAAAAACGATAGATTCAATAATCCAAATGCGACAGAGATCTTAAGG CTTTCCTTTTTTCTTGCGTTGAAAAGGTTACAGATTCCTATCTAGCCTTA CAGGCTTTAAGCTCAATGGAACAAAGTATatacttattttttataaaaac atgtcAATATTTTCTCAACCTCTAGGTAGTTGTATAAAAGGCCATAAAAG CTTTGCAGACTTTTTAGATTCTCAATCAGGTTGTGGATTGAATTTTTCTT GAAATGCTTGCACTTTTTAATTAAAGGCATAGCAAAGCTGTATACAATAA AGTAATTCCTAAAGTCTAAAGCTTCTAACTCAAGTTttcaatttgttctt aggtttttgtgaaattttctatCCCTTCTTCTATAATGTCTTTTATAAGC TACTTTTATATCCTAAGAACTCTTCAATGACAAATTTAACTTCAAGTTTT CAATTCATTCTtaggttttaatgaaatttcatcTTTTGCTCCATAACGTC Taaactctcgggtacctaataagcgtctcccgcccccgctaattaatttt tcgaaaattttccacccaggacattctaaTTCTAACCCCTctgcttattg attttttgggaaaatgattttgaaagttccctcttttgtcctaattctga tgtattagctctagtttagacggccgactttctgccccgcctattctaat tgttagagtaggcagaaagagggcacaaagttggttgttaaaatctttgc ttggaaaggtttgaaagaAGACTTTGATCGGANNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTCTAGAGGGCTATGCA tcgactttagacagcccactttatgccctctttaattcacaattagaata ggcagggcaaaaagtgggccgtctaaactagagcttagcctccttttcaa aaagtttccacccaggacatttttattccaaccccctcaTTAACATTTGA GTAATTTTCCACCTGCTTATTCCAAAGCCCCCGGTTATcaggcacccgag agtaagtCCATTcttaataatttcaattttttaattactAAGTTTAAAAA GGTTCGGATTCCTATTTTTAATGTCACAAGTATAAAACTCatctttttta ataaattcatttttctaGCAACATGTTCTGATGCATCAAGGAATTGTCGA TTCTTCCCAACTTCCATGTGCTCAAATGCAATCATGAAAATGAGATGCAA AGCCAAATGTGGTCTGTGTGGTACAGGAGGTAATAATGAaacaattttgt tgttttgcacctccctaaaatcaaattacatTTTCATAAAAACCACTATC ATTTGGCTAAGGCTCAAAATTAACTATTGTTTTGTGATTTTGAGGCTTAA AAATGGTATTTGAGACAGCTTCTGAAATTTGAGGCTAAGGTTGTCTGAGG TTGTTCCTTTGGGATGAAATTGAATCTCAtgttcttaaaggttttatttt taagtaagagtgatatcgtttgcttactcatcaattttaatttacaaact ttttcacattgaatttacacggatgtggagcaatagacagaaagaggaaa agaaaaacatttcatttgCTTATAGTCAGCacaatagacagacactgtcc tgatacgAAACATGTTTCTGATAttaaacgggaacacttatgtaaaaata aaacctttaaaaaagctATCTTATCTGGGAGGTGATAAAATGTCTCTGGT TTAGCGCATTCAATTGGCAGAANGGTTTAGTGTTGATTTTAAGTGACCCA AATATAGCGCATTCAATTGGCAGAATATAAAGTTTAAGTAATTGAAAATG CTACTTGGGGGAAAATTcctctactttaatgggattaagttttgcggatt tgggtgtcaagtTCCAATGGAGATTAGGAAAATccttatccgcgaaatat tgTTCCCCAATGATCAAAAATATGATGGGGCAGTAAAAAGCACTAGATAG TAAAAATATTGTCTCCTCgtagtgccatccgcgaaattaagttcccacga aatcttaacATTTCACGGATAAgctaaaccgcgaaatttaatccccgcga aagtttaccCAATTAAAGTTTTTGAGAGTACTTGATTCTCACTTCTCTTC CTGTCACATTTTGTTCAGCTTTCTCTGTATGGTATGGGTCCAATTTTGGG ACTCTGATTTTTGTCCGCATTTAAGGTCGTTTTCAAATCGAGTGCCACCT CAGAAAAAGACTGGTTGAAAGAATGGCTTTTATTCTTTTTGGGTCAAAAA TtaagctagaatgctaagcagtACAAAGCCATGAACCAGAGTTTCTTAAA GCCGGTAGTCCGCTGTTGGCAGACGCGGACGCGGGCCTTTATTCGATTAT CTGTGCAAACTTTGCATTCAAACGACCTAAACTAAAAGGAAAAAGCTGCT ACGTGTCAACCTGCCAAATGACTCAATATATACAAAATATAGTGTTCAAT GCATATTTTTCTACTTGAAATAGCTTGTTCAGATGCTTCGAAATTCTGTC CAATGTTCCAAGGGAAATGTGACAATCCTTTGGTCAAATCCAAATGTCAA AACATGTGCAATGCTTGTGATGGTGGATCAACTGATAATGGAGGTACTAT TACaggtttttataagcatagattaAATCTTTATAGGCTTCATCACATTT TTTATGAGCATTGTAATTACAATCTACAATAatggtcataatatattggc acttttggctaatttacaatttttcgaaaattgaagttcgagcgagaatg tcaatttttaggccttcaacttgatttcNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNAACTCTACcattcgaacctactttagagcactta caaatcgattgtggtttcaaaacaccccggtgaatttcccttttgtgcca agtattttgtccatcATTGTAGGCTTAAATATGGGAAAAATTTAAGCAGC TGCTAAGcatggaaaaaatcaaaatataacagCTGCTTTCTTTTCCATAC CGTTAACATATGATAAGCATTATTTCGAGCCTGCCAAAACAAggcatttt tctcattttcgcTGATTTGACAGATTTTaggaattttcataaaattttgc ttaggatataagcattcTTAAAAAAGCATTCTTCAGTCTTGTCAATCCCG AGGGGCCTGAGTATGTCTCGGACTGGATtttcgtatgcttataaaaaagt gtatatgcttagcaaaaaactttttgagcCTCAAAACTATTATGTAAGAC TTGTGTCAAGGGGGTAGATCACACACCACACATTATGTTTTATTCTCTAC AGTACTGtgattttaagctttaaaaatttcaagttaactttttctaaaaa aatccaagataactaactcgaaaacttgtgaacaaaaaataaattccgag ttagctaactcgaaaatccttttttgaaaataaaaatcgagttagagtcg agtgacgtcataatttgcacttttatgacgtcataatttagctgattcga aaattcctaactcaaaaattgctaactcgaagttttctaactcgaagagT TCGGGCCTCCTCATAGACCCAGTGGGGTTTTTTCggacagtgggggtaaa aataacggactgaaactcaatggggattgatgttctcatattttttatgg ctggggatttaaattccattgttttcaagtcaaataATTTAGTGggaatg ggaaaaatagcataatatttgacaatgaggattggtttatttggttATTT TCAGTGTGGACAAAAATCGGAGTATAAATTTCCaccagggacgatatttt ggccaatttttccagtgggaaggggtcacaatgggtctgtgagaaggggg tgtcaaaatggataaaaaatcCAACATTAAGAGAGATAAAGCTTCCCGAA GATctttagaaaaaatgaaaacagaaattgcaaataatgaattttttcgT TATAGGTGCATGCGCAGACGAAGATCCAATTTGTTCAGAATTGATGAACG AATGTTCAAATGATGACATTCAAAAGACGTGTAAGAAGACTTGTGGAGTC TGCTAACTCAACAATATATGAAATATATATAttcaaaattacattttaat aaaaaagatttacagATAATACAATGGTGTAATATGGTTtcctttaaagg ga
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00067793TCONS_00067793Clytia hemisphaericatranscript
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_476supercontigscaffold_476:7303..14354 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.4 0.58 0.22 0.22 0 0 0.25 0.24 0.17 0.21 0 0.2 3.03 2.87 0.28 0.36 0.15 0.08 113.67 71.76 0.67 0.14 174.19 122.41 87.57 102.65 0.14 0.29 0.11 0