XLOC_042351 (gene) - C. hemisphaerica

Overview
NameXLOC_042351
Unique NameXLOC_042351
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_476:300671..304994+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_042351 ID=XLOC_042351|Name=XLOC_042351|organism=Clytia hemisphaerica|type=gene|length=4324bp|location=Sequence derived from alignment at scaffold_476:300671..304994+ (Clytia hemisphaerica)
TTTAGATGATCTACGTTATTCGAAATCCAAGAGATGTAATCATATCTTAT
CTCAACCATTTGCGAATATTACATGGGTATGAAGGAGATTTGCAAACACT
GCTTGATTTATTCTTAAAAGATTTAGGACCGCATTGGGGTCCTTATTTCA
AACATGTTTTAAGTTATTGGAACAAGAAATCAGAGCTACCAAATTTGTTG
ATTACAAGGTATGAAGAGATGCAAGCAGATTTACCAAAAGTTATTAAAAG
AATTGCCAGCTTCCTAGAAGTTACAATATCAGATGAAGATGTACTGAGAT
TGTGTGACCatgtatcttttgaaaaaatgaaagctAATCCTATGGTTAAC
AAGGACGAATATTTTGAGGTAAGTTGATTTCGTTAATGCTTATTTTAGGA
ATCATATCGNGCATGGGAGATTTGCAAACACTGCTTGATTTATTCTTAAA
AGATTTAGGACCGCATTGGGGTCCTTATTTCAAACATGTTTTAAGTTATT
GGAACAAGAAATCAGAGCTACCAAATTTGTTGATTACAAGGTATGAAGAG
ATGCAAGCAGATTTACCAAAAGTTATTAAAAGAATTGCCAGCTTCCTAGA
AGTTACAATATCAGATGAAGATGTACTGAAATTGTGTGACCatgtatctt
ttgaaaaaatgaaggctAATCCTATGGTTAACAAGGACGAATCTTTTGAG
GTAGGTTAATTTTGTTGATTCTTGTTTTAGGAGTCATAccgggcttttcc
agaaaaaaactctaCAACCCCTGTTTAGGAGTTCCAGCCTTTTGTGACCT
CTCATTAGAATTCCAACTGGAAATACTGTAACCCCCCTTAAATTTCCAGT
CAAACCTCTCTGGGATTCCGGATTTTTACAGAATTTGAAGCACTACCTCA
ATGGAATTCTGCTTattttttgacggatttttgtAGACCCCTATTTGGAA
TTCTACCTCATTTCAAACCCTACCTCCTGTAACAGAACTGGACCTTCGCA
GCAGGGAGTGTGTagtttttttctagaaaagcccaCTTGGTCTAAACGCA
AATTATGTTCTCAAAAAAGCCGATCTTTTTCCCGTTCGGATACAAACGAC
CCCTGACCGCATAATCACGGTTGAAAAGGTTTAATTTCGAAACTAATCTC
GCATANGGATACAAACGACCCCTGACCGCATAATCACGGTCGGAAAGGTT
TAATTTCGGAGCTATTTTCGCATAGTGTTGTAGTCATTCCACAAATCTTC
CATATACTTTTAGGAAAGGAAAAAAGCGATGAACAATGGTTATGCTGGCA
AATTTATTAACAAAGGTAAAAGTGGAACGTGGAAAGAATATCTAACCGAT
GAAATGGTTCAACGATTTGAACAGTGGGAAGAGAAATGGTTGAAAGATAC
TGATCTTAAATTTGTTTATGAAGTTTGAAGTGTATTCagtcaaattcttt
tttattacaACGTTTGTGTAGGGAGACCAAAATCCTTTATTTTTGAATCC
GTCAATCTCGTACCCCAGAGCCATTcaccattttttttattttactgaaa
aACGTGGATATAGTTTAGCACTGCGCTGTATCAATTTTAGGGCGGTGGGC
GTTTTTTGAAAGACTTGGGCAGGTTATTTTCGGTGCCCAAGAAGGGCTGT
GGGCGTGAAATAGTCGaaataaaagtgaaagtgaaaaaagtCAAGACCAt
ttttttcgagtgatttgacCCTCGCGATAAACTTTAATATATTATTATTA
GCAGGTTGATTTGCGCGAAATTGTTACGAAAGtgttaaaaaattgtcaaa
aaactttttttttaaatttaaacttCTTTTAGTGTTTTTGTAACCTCTAG
GGGTCcagaaaaaatattaacagcTTTCCAACTTCATGAACCTTTTAACT
ttcagaaaaattcaattttttcacttaCAGCCAGTTTTTTCACAGTCTAT
GCGAAGAGTCAGTGAATGCATTTTTGCACTTGAGTAGCAAAAATCTGCAA
TTTCAACctcaatatttttcattgtGGCAACAAACTTTGCCACTGTGGCA
AAAATTTTACCACATGCCCCTGAACCTTTTTTTGAGGGGACCTCTCatac
aaaatttgagctcaaaatttcaaagtgatattcattatttattattttga
gcagtggcaaaatttgatgacgtcaccgatggtggtgacgtcatcattga
tgacaaaattttgatagcAGGTGCCAATACATATTATAAacacactgtga
aaattttatgaaaaattattaaatctaatcaaaagttatcaaaaaatttc
cttcaggGAAAATACTTGCGAAGGGTTAAGCAAATTTTGTGACACACTCT
CTTTATTAACACGAGACTCTTTCCCAAAGgtattttaaggaaaaagtttt
ttccagTTCTCACTTTTATgaataatttcattttagtgaaaagtaaaatt
gcataaaaagattagaaaaacTTTTGATCATGTCTACCAATGGAGAGGAA
AGATGGCAAGCAATCAAATATCAGccacaaaatcagaaaaatttccatCA
ATGGATACACCAAAAGTTacgaaaattgaaacaaactcACCAAAAAAGTT
TCGACGTAATGAATAAGTACTTTCCAGTGGAGAAGactatgacagaaagt
atggaAAAGATGACAGATGATGATATCAAAGTCGCAGCAAAAGAATGTGG
TTTCCATCCATCAATTACTGAACTTCTGGTAGCAATTCAAACGGATCCAA
TCATACACATGCTTTTTCATCACATGTATAAAGAACAAACAGTTCATCTA
CCACCCGGAAAACTGTGCATCCAGTCCTGGCAAGAGGCATTAATTGTGAT
CAACGAATGTATAAATGAAGCTCCTGAATTTGATAATGAAAATCCAATCA
CTGCACCACTGTATTGTATTTTCAGTAGCCCAATAGCAACACCAGTTGGA
AATACCtgttttttgcatgaaaaagtGAATGCTTTGATGaaggaaatttt
gattgaatgGGGTAAGTACTTAACAAGCAAATCTTCTTGTTACGTATTAA
CTGATGCACCTAAAGGTTGGTTCAGCATTAAAGCCCTAGAAGCCATGCCG
AATTTCAATGAAACATATGTCTGCGATCCATCAAAGCCTTTTTGGGGTTT
CACTTCTTGGGACGATTTTTTTGTTCGCAAGTTTAAAGATGGAGCAAGAT
CAGtggatgatgaagaagatgatTGCATAATTGTTAATCCATGCGAAGCA
ACCCCTTACAAAGTTAAATGGAACGTCAAAAAGTATGATCAATTTTGGAT
AAAGGAACAAAATTATTCTATGGAGTTCGTCTTGAACAAGAACCCATTGG
CAGCTGCTTTTAATGGGGGAACAATTTATCAGGGCTTATTATGCGCTACC
AATTATCATAGATTTCATAGCCCTGTTAATGGCATTATCCACCATCTCGA
TTTGGTTGAAGGAAGTTATTTTTCACAACCGTACATAGAAGGTGGATATC
CAATCTTGAGAGACGTACTACCATACTTAGCGCATGTCGCAACAAGAGGA
ATCTTTTATATCAAAGCCGACAATCCAAATATTGGTTTGATTGCGTTTAT
AGCAGTTGGAATGACTGAAGTATCAACAGTTGAAATGACAGTAAAAGTTG
GAGATCGCGTGAAAAAGGGTCACGAAATCGGAATGTTTCATTATGGAGGA
TCGAACTTCCTGTTAGTTTTTAGAGGGGAAGTTAACATCAAATTCGATGA
CCAATTATTGCAAGGCTTAAATTCTGGTAACATCAAATTGAATAAACGAA
TTGGCCATGTTCTTGCACCTGAAATAAAATAACAAGAAGGCGCCTTATGa
tgaaaaactttataaaatccTAGAAATATTCTTATCTTCATATTCATTTA
TCATTTATTGTTAATCTAATTTATTAAtttaatctttttaatttaattct
tttcaggtgaagagccaaatgtaaattttggaaatgccagaaatatatca
ttattattattattgttatctCAGGAGTAAATATTAGAGGAAATATGACG
TCAAAATTAGTGAAACAACTCAATCCGAAAGTGAACCTCGGTTGTTCGTA
AAATGATATAATTTCAAAAGTATGGTCAATAATTTAACATATCTTACTTT
ATATTGATATAGAATTTGTAATTCATGAATATAAAagaattgtttttaaa
ttttctcagcAATACTAGTAGTTTCATGTTATTCACGATCATCAGTTGAT
TTGAAATGACTATAAAGGCCGGTCGGTCTccacaggttttttccaaacat
ACCACTATAGAAATTGATTAAAGG
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00067815TCONS_00067815Clytia hemisphaericatranscript
TCONS_00067816TCONS_00067816Clytia hemisphaericatranscript
TCONS_00067817TCONS_00067817Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00067815-proteinTCONS_00067815-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_476supercontigscaffold_476:300671..304994 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
181.57	170.72	124.15	124.42	5.94	5.3	18.27	14.62	5.68	13.34	9.6	3.25	0.03	0.1	0.01	0.01	24.33	34.33	0	0	66.85	58.26	90.63	79.2	3.71	1.7	4.62	5.85	32.34	42.07