XLOC_042408 (gene) - C. hemisphaerica

Overview
NameXLOC_042408
Unique NameXLOC_042408
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_477:263127..271723-

Legend: transcript
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_042408 ID=XLOC_042408|Name=XLOC_042408|organism=Clytia hemisphaerica|type=gene|length=8597bp|location=Sequence derived from alignment at scaffold_477:263127..271723- (Clytia hemisphaerica)
GGAGGAGTGACTCACCCAGCCCAGCCAACGCAACAGCCAACTCTACAGCA CCTTCACCTGTTCACTCAAGTCAAAGCTCAAATAAATGGCTTTAAAACCA GTGAAAACCAATGATAAATTTTTGTTAAAAGAAAGGTATTTTTGCTCTCT CTTCTGATTACTATTACAATTTTTATCTTTTACAGTTTGTTGATAGAGAA ATATGGCAATGGATTTAAGCAGAAAAGGAGCGAGCGGTGAAAGGAAAATG TTGGGTATTCCGATTGTTTCATTAGCAGTTATAGCTGCTGTATTCATGTG TGTTGTTTATTATGCTTCTGGATATGCTTCTGAAAACACTAAATTAATAG AAAAATATGGAATTGCTAGGACAAAAATTTTGAGCCTTTCCAGAATGGTT GAGAAAATGAGCTCAAATCAAAAGATATGTCAAAGCAACCTTGGTCAAAA TGAGCAATCAAATAAAGAGCTTACTCTGCAAGTTAGCCGTTGCAAATCGG CAAAAGAAGAAGAAGAAACAAAGAGTAAACAATGTCAAAGCCAGATAACT ACCTTCCAGCGATTCTATTCTGCAGTGAAGGTTAGTTTTTATCTTTGTAT ATATCCAGACGATCTCANTAGGAGGAGTGACTCACCCAGCCCAGCCAACG CAACAGCCAACTCTACAGCACCTTCACCTGTTCACTCAAGTCAAAGCTCA AATAAATGGCTTTAAAACCAGTGAAAACCAATGATAAATTTTTGTTAAAA GAAAGGTATTTTTGCTCTCTCTTCTGATTACTATTACAATTTTTATCTTT TACAGTTTGTTGATAGAGAAATATGGCAATGGATTTAAGCAGAAAAGGAG CGAGCGGTGAAAGGAAAATGTTGGGTATTCCGATTGTTTCATTAGCAGTT ATAGCTGCTGTATTCATGTGTGTTGTTTATTATGCTTCTGGATATGCTTC TGAAAACACTAAATTAATAGAAAAATATGGAATTGCTAGGACAAAAATTT TGAGCCTTTCCAGAATGGTTGAGAAAATGAGCTCAAATCAAAAGATATGT CAAAGCAACCTTGGTCAAAATGAGCAATCAAATAAAGAGCTTACTCTGCA AGTTAGCCGTTGCAAATCGGCAAAAGAAGAAGAAGAAACAAAGAGTAAAC AATGTCAAAGCCAGATAACTACCTTCCAGCGATTCTATTCTGCAGTGAAG GTTAGTTTTTATCTTTGTATATATCCAGACGATCTCAATCGAACCAGTCG AACCAAATCGAACGCAATCGACCGATTGAAATTCTATTGTCAAACGCGTT CGAATCTCAATCGAAAATTACCACAATTTTCAGATTCGATTGCTGATATT CGATTGCATTCGATTGCTGATATTCGATTGCATTCGATTGATGTTCGATT GCATTCGATTGATGTTCGATTGCATTCTATTAGGATCCGACCCTTAGAGA GACTAATCTTTGTTAAAAAGCTGACCCTTTTCGAAATCCTCTCGTTGATT CGATTCTTTTGAGCTATATATATGAGAGTTAATTAAGGAATAATGGGAAG CGGTGCGCGTCACGCAAAATATATTTGGGACATGCCTTGTTTCACCCGAA CAATTGAATGCAGTCGAATGACAATCAAACCAGTCGAATAACAATCGAAC CAAGTGAATATTACTCAGAATTTTGACAATCGAATTTCAATCGGTCGATT GCGTTCGATTTGGTTCGACTGGTTCCATCGTCGATTCCGTTCGATTCCGT TCGATTGAGATCGTCTGGATATAATATTGTGAATTTTAAGAGCGAACTAT ATTCAAAATAGACACTTTGAAAATATCATGATGGCCATCCAAAGAAGGAT CTTGAATCAATTAAGGGGACTACCGTCAACTGCTCTAACTTTGAACTATC TGACAAAACATGGGACAGCATGATGCAATTCGGCCACCATCAGTCACGGG GTGTGCATTTGCAACGGTTTCAACGATTTTTTCCAACATTGTGCACATAA GCTAGAACGTGTAAGGCAAAATGCGCTAAAATTAACAAATCTCAACTTTA AAATGAAAATTGGCATAAAACGAAGACGAATGGCATTTTCATTTTCTCTT TAGAAGATTCTTTAGCCTTTTTAGAAAGTGTTTGTCTGCGGGTTAAAACT TTGATCTGTGCATTTTTTTATAATCAAGTGTAACATTTTTCCACTCTGTG TAGATGCAACGGGTTGCAGTGATCGAGTGTATTTGCACAGGGTTTTTTCG TCACTTTGGTTTTCGACCCGTTGCATTTGCCGCATGTCGAACCCTGTGCA AATGCAAGGATTTCCGTGACTGACCATTTCACAGAACCTCCAAAGTCATT TGATTTGAGTTAATGAACGGCGTTTTAAAAAATACACGATTTCTCTTTCG CACCGAGTAAATTTTAGCAAGACAGTAATTATTTTAATCTTGGGGAGGAC TGATTTTGGCCAATTCGTTAAAACATTTAAGATTTTAAAAAATAGGTGAA AATGAAAATGTCCAAGGAGGGCATTATGTCACTCTCCTTTGACTCCTGGG ATAATATCAAGAAGGTCGTTTCTTTTTCATTTATTTGCATAAGTCTAAAA GAGTTAACTTCACAAATAGAATCACTGATCATTACTTCACAGTCATGGAG GAACTTTTTTTTTCAGAATCTCTGTGAATGACATGATAAGGGGGTTGCTG ACATAAGAGCAATTTACAGTATAGTTTTTGAACAAAATAAGAAGTATTTT CCCTGAAAATCACTCACATTGGCACTGTGGTATAATAGTGGTCTTGACTT AGGTCACTGCACAGGCGACTGATTCGATTCCCACTTGCAGTAGATCACTT GGCAAGTGAATGAACTTTTGAACTTTTGCCCGGGTCAACCCGTACCATGT GAGGGGAATTGGGTAGTCAGTCCTAGGTGCTGACGGGACGCTCATAGAAA GCAGCTATAGTGGCGAAAATAGGCTTCAAAGCCTCCTGCAACTCAACCAT ATAGAAATAGAAATTGTGGCCGAGTTAGAAGGAGGCTGTGAAAAAGACCT GATTTTTTTGGACCTACCCCGGTGGGGTGGAAGTCCTATAATTTAACCTT TGTCTGTTCGTTCGTCCGTTCGTTATTAGCTTTCCTAGTGATTGGCTCGT TAGTTTTTTCTGATTTTTTGCACAAAGATGTGTAACGATAAACCCTCGAA TATTACTAAGCCTGATTTTCGAAAAAAATTGTTGGGCAAATTTGGGTCAA AAAACGGCTAAAAAACAGATCATTAACTTTTTCTGATTTTTTGCACAAAG ATGTGTAGCGATAAACCCTCGAATATTACTAAGCCTGATTTTCGAAAACA ATTGTTGGGCAAATTTGGGTCAAAAAACGGCTAAAAAACAGAACATTAAC TTTTTCTGATTTTTTGCATGAAAGTAGGGTACCATCATGGTAAAAGATCG CTCAAGCAGATTTTTTCAAAAAAGTTTTGTTGGCTCAAAAAACGCATGTT TATCTATAAGAATCACTATTAATAGGCATTCATCAATGTTCTTAGCCAAA TTACTCAATTTTTTGATGAGATAGATATTTTTTTTGCTCACAAAGTCTTA AAATATGAAAGAATATTTCAAGAGCATGAAATTTTTGNAACGTTTTTTTT ATAAGAAACAAACGACTAATTTTAATAGATCGTCACTATTTGTGTTCTGA ATGATTGTTTAATGGTCACGCTCACGTAGATATCAATTACATAAAAATTA AGAAACGTTGTATTTCTTTTCAATATAATCAACTGATGAATGCGTAAGCA AGAAACTTTAAGTATTGAAAAGAAATACAACGTTTCTTAATTTTTATGTA TCAAGCTCTACTTATGTATCGAGCACTCCTAATTGATACCTACTTCTTGT GTTTCTCTGCACAATTAAGAGTGCTCGATACATAAGTAGATATGTGTTAA ATGCATAACCTGTTAGGTCCATAAAAGTATCACTTGTTAATCCTGGATTA GTTTATTAAATCGATTTCAATCAGTTACGAATTTCAATTTGTTTGACTAT GGGATGACCTATTGAATGCAATCTGAATAATTAATGACCTCCTTCTGCCA GGAATTATTCATTCCGACAAAAAGTTTTTCTCTGTAACACAGTATCATTA TTTTTTTGTTTTTTTAGGAAAAACTAAATCATGGAGAAAATGGGGAAGTA ACAGCCACAGTTGACACAAAATCAGATTTGGATAACACTATAGATGGTAT CGTTAAATTAAACGGTAAAATGTCTTGCATGATATCTATTATATTAACTG ATTGAAATTGATTTTTTATGATTCTCGGGGGTAGGTTATATACCAGGATT GTCAGATGACGGGTATGGCCAAAAAAGTTAGAAAATCGATCCTTACTTAG AGAGACTGAATTTGAAAATGTTGTCTATCTTTGACTTTTTTGTCACCCTT AGAGAGACATTTCCCCGAAATTCCAGCCAATGTTTTTAAATTTTAGTCCA AATTCAAGAATTTATTCAATTGAGTCAATTTTTTATTTTCGTAAATTTGG AACCCTCAATTTGCTTTTTTATGGTTTTTTGCCTCGAGGGACTTTTGAGG GTGTGAAAAAGGGACCCTTGGCTCACACATACCTCCATCCCAATCAGTAA ATATTTTTCAGAAAATAGTACTTTACTTATAAATATTGTTTTAATGTTTC TAAAGTCTTATTGCATATTTAACTTAAAGTATTCATAATTATAGCCAAAA TCTCTAAACTTGAGGAAGATCAATCAAAATGTTCTGAAGTTGAGAAGGAG TTTGAGGAATTGAAACGATCTACTGAAACAACAAATTCTCAGATCAAAGC ACTTGCGACAGAAAAGTAAGCTGATGTTTTTATTTTTAGTAAATTTTGGT GAAAAGAAACGTGCATTGTGAAGAATTGTTGAAAACAAGCATCTTTACTA CTTTAATTGTAGAAATTTTAGCGAGACTAATTTTAGCGTATATTAGCGAG CCAGAAAAATCTTGATTTTTTTTGTATTTATTTTAGCGAATCATGATTTC AAAAAATTTCGCGTGGATAAACTTTAGCGAATACTCGTATTACATTATTG ACCAAATTAGTTTTCTAGCATTTCTTTGCACTGAAACCCTTCCTATTGAT AAAAATGTATCAAAGCAATATAACCAGAAATTTCGCATGGATAAATTTTA GCGATCTGTCGTTTCGGTGTGTTTTAGCGAGATTTATTTTAGCGAAAATA TGGAAAACTCGCTAAAACGCTAAAATTAGTCTCGCTAAAATTTCTACGAT TAAAGTATTCAACTAAGTTGCTGAAAGGGAAAATTGCATAGTAAAGTATC TATTTTAAAATTGATTCCAAATTAACTATTTATTTATAATTACCTACATT TATCATAGGGAAGCACTAAATGACGAATTGAAAAATGTTCGAAAATTGTT GGAAGAAGCTAATGCAAAAATTTCAAATTTCGACGACCGTGAGTTCTTCT AAATCATTTTTTAATTTTTTATTCAGATTAAACTGTCTTCAAGCCATGAA ACTACATGGAATGAACGATCAGGATTTAATATTGATTGTCTAGTTTAAGA CCATGTTCAGATGTAACGGAATCGTATATGGTTTCCGTATTTCCGGTATG GTTTCCGTTACGGATCGAGAGTGTTCATATTGGTTTCAGAACGTTTCGGA GCAAGAAAACGGAGCAATTCCATTCCGATGAAAAAAGTGGAGCAAAACCG TTTTTTATCCGTTTTGCTTTGTTTCTTCATTGACGTTTCCGATTTTGACG TTCACATTGTTTCGAAACTGTTTTGTTCTAGAACTATATGGAACCGTAAC GCCTGAATATGATCTTAGAAGGCTTACTTTGTAATGATTTATTCGTGAGC TCAACGTTTGCTTGAAGTGGCTCCTCTCAAGTGGAATATAGCGTTCCCAA TGTCTTCCATTATTATATTCTTCCATGCAATANGACTCCTCTCAAGTGGA ATATAGCGTTCCCAATGTCTTCCATTATTATTTTCTTCCATGCAATTTAA AGTATAGAATGATAATATATTATTATTCTCTATTTTCAGATCAACATAAA AGAAGTTTTCAAAGGAAGAAAATTCCTGAACAGGATAGAAATGTAAAAGA GGAGATTCTCAATGAAAAGAAAGNATTCCTGAACAGGATAGAAATGTAAA AGAGGAGATTCTTAATGAAAAGAAAGAACAACCTAAGCCTGTCAACCATG AATCTGGGGTTGTAGATAGCTTAAACAAAGCCTCGTCTGTTTCTGGTAAT AATAGTGCTAGTAGTGTAGTTCACAAAGCTATCAACGTCACTTCGAGTGA TGCAAGAAATACAACACCCACAGAAGCTGATAGCGAACAAACCACAACCA ATACATCAACCTCTTTTACCAAGACTAATACCTCAACCGCGTCGCCAGAG TTATCAACAACCACCAAGAAGGCTCTGGTCACAGAAGAAGACGACGATTT GGAAGGTGGATTCAATGATACAGCAGGTGAGAAAAATTCGAAAACAACAA TTGCCCCGAGTAAACAAACCATAAAAAGCACACTTAATCTTAATCGTACT CTAAGCACGTCTTTTAACAACTCCGATAATAAAATGACCGTGAAAGCCAA TGCAAGTGTAAGCAGTAGTATTCGTGGGGAAACTGTTGGAAATTCAACTG AAAAGANCGATAATAAAATGACCGTGAAAGCCAATGCAAGTGTAAGCAGT AGTATTCGTGGGGAAACTGTTGGAAATTCGACTGAAAAGAAAACCCATAG TGTTATTGATGCCAATGTACGACCTGATATCTTGAGTAGGGAAAGCGAAA ATAAAGAAAATAACGAAAAAGTTATTGAGAAGAAAGGCGATGATAACTTT ATTGATTTCAACGAACGACCTGATATCACAAATAAAGAAAAGGAGAAGAA AAATTCTTTGAACGTAGAAAAAATTACAGACGTGGATTTGGATGAACTTG ACCAAGCTTGATGGAATTCAAACTCCAATGAACTCCTCTTATAATATTTT CCTCAGTCTTTAACATTATCAACCAATATATATTCATACTAATTTTGGGA GGATTTGCTTTGGAGTAGAATTGTTTTGTAACGGTTTTTGTTTAAAACTT TTTCTCGGTCGAAATTTGCAAATTTTAGAGTAGTATTTTTTCTTTTAAAA TCCACGTCTTGCTAAGCATGAATTATAGAATTAAATCTTCACTTTAAAAA TTTTTTGAAGTCTAAAGGTCACACCTATTAGGTATATTTCGTTTTTTTTG TATTTATTGATATATTATTTATTTGTTGGTGCATATACTTCNATTTTGTG TTTTGTATTTATAGATATATTATTTATTTGTTGGTGCATATAAGGCTTTT TGTTGTATTCATTTCCATAGCTGTTTTTTATGAGTTATTGTATAATGGCT GTATAATAGATAGTTTTTGGTTTTTTAGTTTTTGTAATTCTTGTATTTAG TTCATAGCTGCACTAGATTTTTTTTCTCAGAAGATTTTTGGTTGGCCTAA AAGGCCAAATGTCCACATTTTTTTATTCGTCTACCTATCACACCATTCAC ACTATCACACTTCTTTAAAGTCCGCACTTTTTTCTTTACGTCCCTACTTA TTTTAAAAACAGTTATATTTTTACAAGATCTAACTTCCCCTTAACCTCTC CCTGAAGTCATTGCTCTGTAAGATAACCCGAGAGATAGTTTGTTGTACCC AACACCGGTCTATTGAGAATCATCTAAACAACTCTCTTTATATTTTAGAT GAACAAAGCAATAAAGAAGATTTTGATGCAGAACCGAAAAATAATCCGGA GTTCGTACCTGCAAACATGAAGTAATTACGACTGACATTAAATACACTTT TTCTTTGAATGGTTAGATAGAATGTTTTGTGTGAATTGTCCTTGTCATAC ATACACGTTTTTTTTCATAGGAACATCCAACATTTTTGAAGCCTTAGGAT GTTGTTAAATCTTTTAGTTTCAAGCCTGAAATGTTCTTAAACATGTTCTT ATTTTGACCGTTTTTTGAGCATTTTAGTCAATTTTCCTAAGAAAAAGGAT GTTTTTGAGTGCGCAAAGCCTTAAAAATGTTCTTAACTTGTTCTTTACAT TTTGGCCATCGAAGCCTTATGTTCTTATATAGGTTGTTCTTATATAAAAA AACGTGTACACATACTTGTGCTAGTTTCGTGATAAGAGAACCGTGACGGA TATTTCGCATCTATAAAATGACCGATGAAATTCGGACTATTTGGAATGAT GGGTGTGAAAACTCTTGTAATTTCTATGTAGGTTGTTTTGCGTTTCTTTT CTTACCGTAAAGTCAGTTTCTAGTAGTTTTATGTCCATTTCTATCAGTAA ACAAATAATTTTATCGAATTTGTTTTTGAATGTTGATGATTTCAGCCGCT TTCTCAGATACATTCTTTTTATATTTTTTTAATNTTGATGATTTCAGCCG CTTTTTCAGATACATTCTTTTTATATTTTTTTAATGTACAATTTTTTAAA GATCTTTCAATATTTAATTAAATGAAGAAATATATTTGATAAAGAGG
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00067901TCONS_00067901Clytia hemisphaericatranscript
TCONS_00067900TCONS_00067900Clytia hemisphaericatranscript
TCONS_00067899TCONS_00067899Clytia hemisphaericatranscript
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_477supercontigscaffold_477:263127..271723 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
151.45 159.75 50.78 38.79 66.77 50.95 95.49 98.94 53.82 48.42 31.53 31.21 25.34 21.77 18.64 19.61 45.51 42.78 18.17 28.25 33.64 32.04 63.19 60.52 45.39 51.84 25.61 16.68 30.64 34.1