XLOC_042662 (gene) - C. hemisphaerica

Overview
NameXLOC_042662
Unique NameXLOC_042662
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_483:451745..460768+

Legend: transcript
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_042662 ID=XLOC_042662|Name=XLOC_042662|organism=Clytia hemisphaerica|type=gene|length=9024bp|location=Sequence derived from alignment at scaffold_483:451745..460768+ (Clytia hemisphaerica)
ataaaatgttaCCGATCAAAATGTTATACACCATAATGGTAACCTTTCTA GCCATTTCATTGGTCAGTACAGATGACAGCATTATTCCGACAGAATGTAT GATAGGGAATTACAAGAATCTTGAAGGAGACCATCACGAACACCGAGCTT TTAGTTATCGGGATGTTTCCGACCAAACAGATTTTTTAGATGGCGTTCAC GAACATGCTAAAAACTTTTCGGTCGGTTTTGACAACTGGTTTCGCTTTCG TTTATCAGACGCTGACCGTATGATGGAATTGGTTGATTTGAAAGTAAATG TTTACAATGATTCAGATTTGGTAAGAACACATTTATTCTAATAATGTTCT GATTTGGTAGCTTCTCAGTTTTAATACAGAGTTGCATCATCACTTTTTCA TGGGAGCATTTATCGTCCGTCCAGTCTCATATTATAGAAATTGTTCATTT TAACAGCACTTCATTTCTATTTTGTAGATGAAACTAGGCGGACTATATAT ATAAAACAGTAGTGTAGACAGGGGTGAAGGATTATTTGCTTAGGAGGGCA GATTTAAGCTACAAAGTAATTATGCTTTTATACCACGAATAGGTAAGgcg agaccaaattaatttgttgttctacgggcaaatcgttagcaaaatatggg tcggtcggtcggtaaaataagaataaatttttcatttacacgtttttttt cataagaacaaactatataacaacataaggcttcgaggcccaaacattta agaacattctaagaacattctaaggctttggagacattttcttaagaaat cacatcaaaatgctcaaaaaatgctgaaaataagaacattttaagaacat ttttaggcttcaaatccaaaaaattaagaacatccgaaggcttcgaataT TTttaacgttcttataaaaaaaaacgtgtatcagggttggtaaagtaccg agaaaatgttttccaaaaaatatctggatcaaaaattcactttttttatc ttcgatgaagatcataataaaatcttagtgtaNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNaaatcttagtgta tggaatgcttgattttctaaatttttcaatttcttgaattaattttcagc tttattaaatttgattcttacaaataactagtgtgtaaaatatattgtag tggaaatggtggaaattcaatattattatttttttgattttagcaaaaat agggtcggtcgggcccgtagaacaacaaattaaattggtctcgcctaatt aCTTTGTCGTAAAAAATCTACTGTTCTAAGCAATTAAGTATAAGTCCgaa agggctagaatcgaatctttaacctttctcaggcaagaaaaagtgaagcc ttacaAAATATGCGCCttatttttgatgagaaattgaatctagcgatttc tttgtttttgagtaatatttttttcgaaatttaggtgtaaattttagttt caatctgtcatttgtgtaagaTCCAGGCGGACCGcgctaggccgcgcaac tttggtaggcttcaaatcctaccaagcaGTTTCGATTCTAACCTTTCGGG CTTACACTTTATTGGTTCTGAGCTTTCTCTTTTATGGAATATTGCGATCA CTTCCTGTCTACTTTTTGAAATCAAGATTCAGAGATGAAAGTCATTGTAC AACAACCTTCCTTTTGATTATATTCAGAACACATTTTCACCGTGTGGCAC CATCAGAAAATCGGGTTATTTTTGGACTTGGTTgaaggaagaagaaaaag acAAGCCTTGGCTCTGGTTACGTACTTACACACAAGAAACTTCAAATATT TATGTGTTGACTGAATCACACCCTAAAGATAAATACAGTGAGTCTTTTTT TCTAAGCATATTCTTAAATACGCCTTAAAATTACGTTATTTTCCTTTTGG AAAGTTCTGacaaaaattgtcgaaaaaatCTGACAAGAATTAGACATACA CTCAAATATGAcctattttatttgatttttctgtCACTCTTAGTCATTTA CCCTGAGTAttagaggttaagttttcagaagaatatattaacctctgaag accaataatagaaattctattgcgCATGTGttaatctaatcactgtagaa aaatcaaaagtgaagagcaaatattaccatattaatgtctagctcgactg tatcagtatgcagtttgcTATTTACGAATTCCTCAGAAACCTCAAAGTGT AATTgtaatgagtttctttcaaaagaaatcttttacatgatccccaaatg tataacggtaattactaaacttttaattatggaaatgtcactttaattga atcgaaataataaacagactttatgttataaTTCACTAtcactgactttt ttttaaagcattgatgacatttttaagttgtgttttcaacgacgggaata aaaagatcttggatggtcgtcatggttacttttctctgcgttgattgcgc gctgaatagaatctggattggtcggcacagcgtcaatatatgatatgata tgatatgatatcggcctgtgcttttcacggtattaGTCATTCAAGGCGAA AAAGAAATGATTTTTGGGAGGTTCCCTATCGTTAATAACCATAATCTATT GTTTCTGTTTCATTAAGCCAGACTTTTTTCGACAATCAACGATGAAgaac taataataataatttccaGGGAAAGTACATCCAAAAGGTCTGCACGATAT TCTTAAAGACACTTTCCTGAATCATAACGCATCTTCtcaaatgggctatt ccagaaatggCCAGTACCaccaatgttttttttgttttgttttttgtagg ATAGTATTTGTAatgataaaaatatctaaaaatcgTGCAACGTAATTTTG CTAATATTGAGgataaagtaaaaatctttcctaAACTAAAAAAGATTCGC AGGAGTAAGAAGAAGACATCACCTAACTCCTTGAGGAGGTGTGTCGTCCA GGGTGATCTGGGAAATAAAGTGTAAAAATACCAGGTTGtactaaaaatga aagaaaaaatccaggggggtcacctttccaaaaaaagacctcctcaacat agggggtacaattcttttctggaatagcccaatgtcaattatttttttcc agGTTCAATTTTAACAACTGCTATTGGATGCTCATATAATACGGTAACTG GTCCTTTGCTATCTAAATGCAAAACTAACTACGTGACCGGTAAAGAGGTT TGTGATTGGACAAGAAAATGCTCAATCAAAAGCGCTGTTACCATTGCTGT GCGAAACTGTGGTGATTTCTATGTTTATAGATCATTACCGATtccagaaa taaaaaaagattatgAAAAGTCCGGCATCTATTGTGGAACAACTGCAAAT CTAACAACGGGTAAGTTTTTTGACACAATAAACCTCAGGCTCAATTTGAC CAAATCTTAAAATTGAATTGAGAGCATTCCAATCCTCAAATTTCAGAATA TAATAAGAAGATGCTAATATGTTTTAAGCAATGGCCAAAGTGCATCTTGT ATACCAGGATAATCATAACAACGGACGAAAATTATAACAGGCTAgtcaaa atacgaaatttgattggttaaaactcACTAGCCTACTACAATTTTCGTCC GCCGTCATGTGATTTTTACTTTACTCAACCTCATTAGTAGCACATGATCT TCGATATTTCGGCTTATTTAAAAACCATTATCTAGACATAAgtaaaagca aaaataaatgaTCAGAAGGCGGTCTCAGAGCTCACAAATCACGAAAACTG CATTATCCCCGGTCATCCATTTTTTAACTGTCTTTTTTGTGTTCTTTCCA GTAACGGAAGAAAAGTCAGAATGTAAAAACTACAGAACTCTGCAAGAAGA TGGGCGTGAATGGGGCGCTGTAAGTGATAAAATCAGCACAAACGTATGCA AAGATGACGAGACGTTCCTTGGTGCGCCATTATGGATTCGATTTAATTCT AATATTAGTGAAACCATGCAGATTGCAGAAAATTGTCCAAATACAGTCGA AAATGCTGAATCATTGTTGACAAATTCTTACTGTGGGGCGTTATATAGAG GGTGGATCAAGGGTGACCACCCTTCAGTTGAAGAAGGTTAGtgtaatttt aaattatttttctctttctaaCTTCTTATTCTCAATTATGTAATTCTTAA CTCTCATATCGTCAGAATTTGTTGGAATGGATTTGTGACaacggaagaaa ttttggcggaaatttaattttattcgtcatccgccaaatttaaattgatc catttattcccccaaatgtgtgctatttcaggctttaaaacaggtttttc cttTTAATGGCTTTTTTTGGACAGAAATGTCCTTcatccgtcaaattaaa ttccctctgaaaaaacctttttcagccatccgccaaattaagttcatGCC AAAATTTtcggatgagctggagtttttacaacgtCGGCCATGATTTTTGA TGTGTATTTCACCGAACGCAAAAACAGAATAAGTTGAGATATATTctatc tgaaaagaaaattcaccaaccgaattgaaatatatcaaatttctatcaga aaaaaaaatttaccccctcctaaagtcccgaggtcccgaagtcccgaatt gacatatatcaaaattttactagaaaaaaacttttacaccaacctaaagt cccgaggtcccgaagtcccgaattgacatatatcaaaattttactagaaa aaaacttttacaccaacctaaagtcccgaggtcccgaagtcccgaaatgt caaacttatgaaaaagaaattacacCAAACCTAAAGTCTCTAGGTCCCga aagtcccgaattgaaatatatcaaaattctactagaaaaaaatttttaca ccaacctaaagtcccgaggtcccgaagtcccgaattgaaatatatcaaaa ttttactagaaaaaaacttttacaccaacctaaagtcccgaggtcccgaa gtcccgaaatgtcaaacttatgaaaaaaaattacaccaaccaaaagtccc gTATTATAATATATCAAAATCTACCAGAAAAACTAATTTACACCAACCTA AAGCCTCGAAGTCCCGAATGGAAATTTACCAAAGTATAGTCTGAAAAAAA GTTACCCCAATCAAAAGTCCCAAGGTCTCGAAGTCCCGATGGAAATATGA AAACTCAAGTAGAAAGAGGACCGGGGGAAATGACTGATNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAGGGGAGAGTTTAG TGAATTTCACATAAAGAAAGAttggaaatctatcaaaagaGGTGGGGGTG AAAGAGGGGCGGAGACAATGAATGATAAATTGAATACAgcgagacagggg tgagatTAATGAAATGGACATGGATAAAATTTTCACATAAGGAAGGAAAA CGGGTGGGGTGGAACTAAAGTTGAAAAAGGACCGGAGAAAAAGAATGATA GATTAGACATGGTGAGACGGGGGATCGGATTGTTGAATTAGGCAAGGGTG GGATGAAACTCAAGCAAAAAGAGGGGCTTGGATAAATGATCGATGAAACA CAAGATAAAGGGTGAGATGACCCGTAAAGAGAGGTCCAGAGATGTACATG AAGACAGGGGTGAGATACTGTAGATGCAAAGGGAGGGTGAGAAAGGGGTG AGATGGATTTAAAGGGAGGTGGCAGTAATAGTATGAAAAGAGTAGGGGTA AAAATCAATTAAGACGAGACGTAGGTGGAAACTTTTTCTCTCAGAAAttt gatgtatttcaattcgggactttgggacctcgggacttttggttggtgta atttttttttgatagaattttgacatacttcaattcgggacttcgggacc tcgggacttttggttggtgtaatttttttttctcagaaatttgatttatt gaaattcgggacttcgggacctcgggactttaggttggtttaaattcttt tttgatagaattttgacatacttcaattcgggacttcgggacttttgctt ggtgtaattttttttctcagaaatttgatatatttcaattcgggacttcg ggacctcgggacttttgattagtgtaatattttttttcagaaagttgatg tatttcaattcgggacttcgggacctcgggacttaggtatggtgtgattt ttttaaaatagattttcgatatttagcaattcgggacttcgggacctcgg gactttgggttggtgtaatatttttttcagaaagttgatgtagttcattt cgggacttcgggacttcgggacctagctatggtgtgatttttttaataga ttttcgatatattgcaattcgggacttcgggacctcgggacttttggttg gtgtaatttttttctctcagaaATTTGANNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNttcgggacttcgggacct cgggacttttggttggtgtaattttttttctcagaaatttgatttattga aattcgggacttcgggacctcgggacttgagtatggtgtaattttttttt aatagattttcgatattttgcaattcgggatttcgggacctcgggacttt gggttggtgtattttttttttcaaaaagttgatgtatttcatttcgggac ttcgggactttaGGTATGGTGTGAATTTTCTTAATAGATTTTCGATATAT AATTGCAATTCGggaattcgggacttcgggacttaggtatggtgtgattt aaaaaaaatagattttcgatattttgctattggggacttcgggacttcgg gacttcgggacttgagtatggtgtaatatttttttgatagaattcgataT ATTCagtatttcaatgaatgtaactttGTAATTTTAAACATTGTAGAAAC AAAGGATGAATTGATGCTGTTCTGCAAAATTCAGCATTTCtctatcttgt aaaaactccagcttgtcccaaaattttttcctttaagATTGATAAGATTG AACTAAACTCTGCCGTATTTTTATAACTTCAGGACGCACAATGCGAACAC TTTGTTTTTCGGAAGCTACAAGTTGTAAATGTGAATTATCGAGTCAATTG GAAATTAAAAATTGTGGAGATTTTTACGTGTACCGAAGAAAAACACGTGA TTTCCCACACTGCTTTGCGAGAGCTTGTACAACACTAGATCAACGCAGTA AGTACAGTTAACGAGTATCCAACCAATCAACGGCGTTCAATCATTGACTG GATCCTAACTATtattaaaatcatcaaagtattttgataatatttctaAC TTAGCAACAATACACCTTACATTTTGATAAACAAAGATACAAGCTTTGAA TCAAATTTATTCGTGTTTTAGGTCCAATCAAGCGAGCAACGACAACGACA ACGACGACAATTCAACCGACAACTTCCTCAAACAACACATACAACTCATC ATCATCAGTGTTGGACACTGTTGGAGTTTCATCCTCTTCGATGGACGATC TAATGATGTCATCTATGATGTCATCGATATCTGCTTCTTTGGAAACTGGT AAGTTACGAGCTAAGTTACAGCAATTGATGCCAATTAATATGGCACATTC CCTTGAAATTGACCCTCTCCAGGTCCCTAaagtagtgcagtggtagagaa cccggctacggttcgcaaggttgcgGGTTCAACCCCaagctgggtcatac caaagattctcaaaatactaCTAAGGTCCATAAAGCGAACAAATATACTT CTCTTGGTTCTATTATTGTTGAAAAACCTATCGTTTGAAGACCTAATTCT GAACTTAGGTAGCTGTGTTAATAGACATTttcttaaattattttaaatgc AACGACTGTCTCGTTTTTACCAAGGTTACTAAATCCCTTGATCAGGATAC AAGTTTTAAATAGAGTAAACTTCTCTGGGAATCagttaccatagcaatat tttgaaaacgaggtaagcggtGCTTGTGATGCAATTTATCTAAAGGTGCA CTTTATCCATTTTATATCATAtccatttcattcatttttttagTCAACCC ATCATCTTCAATTTATGGCGGCGAATATACATCAATTAGACCATCTACAA GTATCCAAGACATTCTCCAATCCTCAGCTATCCAACAACCACCATCACCA CCAACAACGACATTGAAACCACCGAAAAAGAAAGAACTGAATCTCTGCCA AAAATATGAAACCATTGTAGACGATAGTCGTAAAGTTACCAATTACTTTC AGTTGACCAAACAAAACCATGGTTGTGATTTGAAATATTACACAGCTGTT CGCTTCATGTCAACCACTGGTCAGAATCTTCAACTCAAAGAAACATGCGC CAGAGCTGATCAATTCTTTAAAAGATGTACATTCTCAAATGCTAATGTAT GGTTATCAAGACCTCACCCAGTAAAGGGGAACTCAGCCGTTGGAGTCTAT ACAATCTGTTTAAAACGTGAATCTAATGATGGTATCTCTATCTTTGATCT TAACTATTGTAAATGCAATCAACAGGAGTTCATATTAGTCCAGAGATGTG TGGATGACGAGGAGAATCACTTTTTTGTCTATCAATTACAACCATTGTTG AGGAACACAGATCCGAGTACCTTGAGAGATAAGCAATGCAAGATGAGATA TTGTATGGAGGAGATTGACCAAGG
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00068350TCONS_00068350Clytia hemisphaericatranscript
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_483supercontigscaffold_483:451745..460768 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.16 0.39 0.23 0.22 0.3 0.62 0.49 0.46 0.38 0.52 0.24 0.32 16.21 20.61 2.81 2.19 0.78 0.28 0.94 3.01 0.02 0.06 0.28 0.19 1.13 0.84 0.09 0 0.07 0.07