XLOC_042742 (gene) - C. hemisphaerica

Overview
NameXLOC_042742
Unique NameXLOC_042742
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_485:310675..321295-

Legend: transcript
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_042742 ID=XLOC_042742|Name=XLOC_042742|organism=Clytia hemisphaerica|type=gene|length=10621bp|location=Sequence derived from alignment at scaffold_485:310675..321295- (Clytia hemisphaerica)
TCTAATCACTTCAAACTGGGTAATTGCTTTACATCCTGGCCTAAAATATA GATATATCCTACAAAATTACTACGCTGAATGTTCTATCAAAATCCCGATT GGGATAGAAAATCGGTTGTTCCTAGGCTGAGAAAATAATTGGGATAGATT AGGAGTGTAATTTTTTCTATTGATTTTCAAACGGGAATGAAACAAGGTCA TTTTCCCATTGGGACTGAAATTGAAGGGTGTTGTCTCAACGAGGACGAAA TTTTTGCCACAATTTTCAGGATGGCTAGAGTCTGTGACACAGGATTATTT TATCAGTTTGAATTCGTGAAGGTTAACAGAAAAATGATATGTGCTTTATA CACATTGATCGGGTGGGTTTCTTTCTAGATTATGGTATAGTAGGGGGGAT TTTGTTCGATTTTTTGGAATCGCTTGACTGTTTTGTTAGAAGCACTTGTT ATACATTTTTGGAAAGCTAAGGGGTAGGGGAATCGAAATTACNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNGATTTTCGGACAAATATGACGGTCTCAGGCAAAAATCATAGGG TTAAAAATTAATGAAAATTTTAGCTTGAGGAAACAGAGACCTGTTGTATA TTTTTGGAAAGCTCTCAAAAAATTAAGATTAGAGATATATTGCAAGTATA GGTGATTTCAGTACCTAACTCCAGATATTGAGCTATAAAAGCGCAAAAAC TGGACAAAATAGCTATGTTTCTGGCTGAAAAACACGGTTTTCAAGGGTTA ATATCTCGAGTTAGGTACAGAAATCACCTATACTTGCAATATATCTCTAA TCTTAATTTTTTGAGAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCGAGCTAAAATTTTCA TTAATTTTTAACCCTATGATTTTTGCCTGAGACCGTCATATTTGTCCGAA AATCACACCAAAGTGTCCGAAAAAAAATCGGAAACATAGTAATTTCGATT CCCCTACCCCTTAGCTTTCCGAAAAGGTATAACAAGTGCTTCTAACAAAA CAGTCGAGCGATTTTACAAAATGCCCTCTACTAGTACATCATATTTAGAA TTTTACCTACATTCTCAATATTAACTTTATTTTTTTGTCAAAACTTATGA TGATCTGACAGATGATGCCTCCGAAAATATTTCATTCTACTAGGCGTTTC AGAAAAGTTTGAAGTTAATCTTCGAGAAAACTTAAGATTTTTATAAATCC AAACTTTTCACAATTTGAAGGACTTGAACTTTGCGCTATCATACTTTAAA TTTGTTTCACGTATTCGAAACTGGTTATAAAGAAAATTCGAAAAAATTAT CTATCGAATTAAAGTCATTTTTGAGAAAAAGTATAGATAAATTTTATTTA ATGTCCATTAGGTATTGACGCTAGCTAGTAAATTTTAGTGACATTGAATT TCTTCACAACTTTGGAGCACATGAAGTAAATTTAAAGTATGATAGCCCAA AATTTAAGTTAGCTTTTCTTCTTTCTGATGATGAAAAGTTAAGATATATA ATATTCTAGGATTTCTATTTAACAAGAATCGCAAAATTGCGACTAAATAT TTCCTTAAAAATGAAGGTCATTATTGACATATATAAAAAAGCACACATAA TAAAGTATACATATATATTTGTCCAGAAAGAACTGGCATGTTGTTTGCTT TGTTTTGGTGTTTAAAAATACCTATGTACTTATCAGTCCTAAAAAAAATA CAAATTTGAATATAATAAGGGCAATAAGTCTGGTTAGATGTTACTTTATT CACAGGATTTAAGGATTACTGAAAAAATACTACTGCAGATGAACTAAACT CAAAAACTAAAACTTTACAATAAATTTACATTACGACAAAGTAAAAATCT ATCTTTAATAGCAACAAAGAAAAAAATGTTGCTCAAAGTTTTAAAGCATT TAAATAGCTTTAAACAAAAGACCTTTTTTAAAAGAGGCAGCCATATTGAA TAATTATGTACTCCAGCATAAAAACAATGATACAGCCATGCATAATTTAG GTCTACTTAGTTCAGTAGGTATAGAGAAATCAAGATTTGAAAACAGACAC TGCAATGGTTTACAAGACTAGAGAAAGATGTCAACCATCCACACGGTTCA TGAAAAAAATAAAGTATTTGTCAAAAAAAGGTTCTCTTTTTTTTGGTAAT CAATGTACACTTTTTAACAGTGTCGGCTGCGCACGCGTATGAACAATTTT CTATTGTTTTGATTTTGGCAACCACGAGAAACTTCACTCTCCCACGTAAA AAATCATAGGTAAACAGCCAGTTCTCATAAGAAAACCCAGCAGAGAAATG GTAGGTAAAGAACTCCTTTTCACCATAACTTCTTTTCCTCTTGGTGAATT TTTGTGAAATTTTCAGGAGAGATACATAAAATTGTCATTAATATCATGTT CAAACATCTAAAACATTCTCTTTAAAGGAAGGAAAAAAATGGCAATGTTT ACATTTCTCTAACCTTCCACAGTACTAAAGTGAGCATTTTTACCTCCCGC CTCTACGGTGGAGATGGCGAGACTGTTAAACGGTGTCTTCCAACAAACAA CAATCAATATACCCTAACAGGATCCCACAGTGTAAACATTATCAACCAAC AAAACCCACACCACCAAAATTGTAAAAATAAGTCAATATAATTTCTATCA ACAATTCTCGTAAAATGATTTTTTTCAAACATTCTGACTGTCTGATACCA ATCATGGCTGGAGTCATCATGTGTAGAGTGACTGTGTATAACAACAAAAG TTTATTGAAAATCATCCCACGGTAATGGTGAAGCTAAAGATTTATCAACC AAACAAAACTGACGCGCCAAGTCAAATCTGTCGATTAAAAATTTCCTTTA AAATTACAATCGAAACTTATCTCATAAAATGCTTTTTTCAACATTCTGGA GAAGTTCAAAGTCAGAGGTATCATATGTAGAGCCAAGCAATACATGAAAA GTCATTTGCTATCCCATTTGCCATGAGATATACGAGTCAAGAAATCAAAC AAAAAACAACAAATCATGTCTCTTCACTTCCACTTTCATGTCACATCGTG TTTTATATGGGGTAACCAGAAAGTCAATCCACAAGAACAGCCATCTTCCT TTATTATGGAGTGTTCCAAAACTATTGGTAGGTTGTTTGGAAGTAAAGAA ACCCACACAGTTTGATTTATTTTAAAGATTTAACTTGAAAACAAACTGTT TCAACCTGCTACATAAGGGAGCGTCTCCAAATATTGTTTCATTTTTAAAC GAAAATGAAACGAAAGCTTCGTTTATGTGCTTCGTTTATGTTTCGTTTAG CTTTCGTTTCGACCTCGTTTCGACTTCGTTTCGAATATATTCAGATAATG ATGTCTGATTAACTTTAATTACTTAAGAAAAGAAGATAATTGAACTGAAA AAAAGATAATATATTGAAACGAATGGTGAAACGAAATAAATTTTTTCTCT GGATTTCATGTCATCCAAAACTTTTTAGAATTTTTTAGCAATAGTCTCAT TTTGTTACTACAACAATAGATAGTTCTTACTTCCTCAAATGTGTAATATT TTTTTCGATGTTTAAAGGGATTCAGTTTCTGAAGTTTCTTGCTTTCAAGC TTGACAAGTTTTCTAATATCTTTTACCCTCGATTTAAGAATTCTTTTAAA CCTGTTTCTGATAAAAAATAAAAATTATGGTATAAGGCTGCGAAGGTACT TTCCGACATAACAACCCGAAACACTTTGCAAATTACTTCAATATAATTCA TATGGGAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTAATTAC AACTGAGTTGGTAATTAATTACAAATTGAGTCGGTAACACCTTTAAGACC TGTTAAAATTGTTGCACTAATTATATCCCTGTTAGCTGATAGCCCCAAAC AGTAAGAAAAACATATTTCTGAAAAAGTCTACATCATAAAATACGAAAGC AGACTTCAATCTGGATTGATCTTCAACCAAAACATTCTGTCGAAAATAAA GTTCAGTCATTAAGATATATTCCTAAAAAAGCGTGCATATGTGAAATTAA ACATGAACTCCCTCCCTATCCTATCCGTTTCACAAATTTTTAAGTGAGAA GTTTGTCTAAACGAAATGAAAGGAATAGAAAAAACTCAGAGATAATTTTA GATAATTATCTCTAAATTAGAACTAATTATGCATTTCGTTTGAGCTTCGT TTGAACTTCGTTTGAACTTCGTTTTAAATCGTTTCATGAAACAATTTGAA ACGAAAAAATTGAAACAACATTTGGAGACGCTCCCTAACAATTGCCAGTC GGGTCTGCTACTAACATGTAATAGTTTTATTATAACCGGGCTTGAGAATC CGTAAGGAATTTGTAACATATATTATATGTATAGTTTATCAGTAGACTTG AATCATGATACATTACTGATACTTCACTGGATGCATTTTTCCCTGTGAAA TTTAAAACGGGCGTCAGTCAGGGCGTACGGAAGGCGTTTTGACACGGGAA ATTATTATTATTACGGAGGAGAAAGCCTGTTTTAACAAGTACTTCCCTTT TGGAAAACGGGAAATATTTAATAATTCTTGATTGCGACTTTCAATTAATG GAGCGTATCGAATAGACACCCCTGTCTCAGTAACCCATTGGGTCTTAAAA GTTCACCGGGCTGACTTTGAAATGAGAAATATCCACCGGGGTTGAGATTT CCATTGTTCTTCACTCGATTTTTACATCGGGTTATCGACCGGGGACAATC TGACCAGTCCACTGATACAGGGGTGTGTATAGTAAAACGTTGTATGGGTG AATGTAGAGAGTCTATCACCATATTAGTAAAGCTCAAATTGCAGATGTAG AACGATAAACTCGGTATACACAGTAGAACGTTGAATTAGAGAGCGTCAAC TGTAATACGAATCAAGGTTGATATTTGATTGATGATTATTTTAGGTATTA ACAGCCAGTCATTGTACTGAAGGCCAATCACCAGACAGGATTACCGTCAA ACCTTAGAGTTCACAACAAAAACTATGATGAAACCTCTAAACAACGAATC CAAGTCAAATGAATCATCATGCATCCAAGATACAGTAGATATAACCTGAA TGCAGATATCGCTCTTTTGGAATTGAAAACACCTGCTCAATTGAACAGTC GCGTACGTCTTGCGTGCGTACCTCAAGTTGGCGTTTATCCACCAACCGGA AAACAATGCTACCTTGCAGGTTAGTAAAACGACGTTGACAGTCTTGAAAG GGATTAATCATTTAAGATAAGAACCTCCATGTCTCAAAAACTAAACGCAT GCTTCAAAAGTCTTTCCTGGGACTCCTTTGGCCAGAAGAAAGTCGTTCAG AATAAGAAATTCCCCTCTCATACATGCGCAATACCTCAAGCTTTTACTCT ATCAACAAGTGTTTTCCATCGTTCGTTCGGAGAATAGGTTACATTTTTGT AATTTCTTTGTTGTGCAAGTTCTTTTATGACGGAACAGGAGCGGAAATTT GAGAAATAAGAAATTTACCATTGAATAATTTTAAAGGTTGGGGAACGACA ACCCACCCAGGGATTTCACCAGCCATTCTCCAACAAACGCGACTACCAGT TGTTCCAAGCCAAAAATGTCTAAACAGTCAAGAACATGTCTGTGTTGGAA ACGGATTCGATCCACGTCCGGATGGTTCCCAACAACCAAATGCTTGCCGT GGAGATTCTGGTGGTCCGTTAGTCTGCCAAGGTAAGTGATGTTTGATGCA GGCCTGATATGGTACTGACTTCTTTTTACGGGTGAGTTTTTTTTCGTTTT TGAGAAATATTGGAGAAATTTTGTCTTGATCCGTTGGGGTTCGGATCAGT TAGGCTCAAAGTTAGAGTTACACCTTTACTAAGGGCTAATCTGAAATTAA GAAAATGAAGATATTCCCAAAGAATAGTTTTTCAACTTTGAGGACCTTAT TTACGGCGAAGAAAAAAAATTTGGAAAAAGCTTTTACTTTAGATAGTGTA TATAGTGTAGATCTTTTATCGAACTACATTTGACGCTCTCTAATTCGATC TTTTTTTTTGTCTCAAGAAATTGGAAAAAGTGGCTTTTGACCAATTTCCA TCCTAATTTTCCGTACAGACAATTCAAAAAAGATTTGCAATAAAAAGGTT AAATTTTTTGTAAAAAAGGAAGTATAAAGGCCCCATTACACCTAAGAATA AGGGGGAAGAATATATCTCTGCAGCTGTTACGATTCGTAAATTCTTGTTC TAGATACACGTAAANCATTTTATTAAAGGAATGGTTCGGTAAAAAATTCA TTTTTTTATATTATCTGTCCTATCGGATTCTCCTTTTAAAAAGACACACA TAGATATAAACTTTTAAACTAATTGATTATTCGTTTCCTTTAAAACGCCA CTCACTTTTGTATGCCTTTTAAACAAGACCTTTTGCTTACGTCACAGAGG CTGTTAAAAGCTGTAGCTGTGTTTACTGAAGTGAATTAAGGCCCCATTAC ACCTAAGAATATAAAGGAAGAATAATGTGAAATTTACTGCACACCTGACA CTTGTGAGCAATTTTATTAAATTCTCCTGTGTAANNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNATTTTTG AATATTTTTACGTGTATCTAGAACAAGAATTTACGAATCGTAACAGCTGC AGAGATATATTCTTCCCCCTTATTCTTAGGTGTAATGGGGCCTTTATAAA TATTTTTCTGGGAAGAAAAGTGGTTATTTCTGCTAGAAACTGAAGTAAAG AGGGGTTAATTATGATAAATTTGTACTATAATATTTTTGAATACTTTGGT AAATGTATTCTGACTCGAAAAGCGATATATTCAAGCTAAGAAGAATATGA TATCAATGGAAATAAAGCAGATTCTGAGTGAGAGAGAGAGAATGGAGTAA GCAAGAGAGATATGGACCCCTCATTAACAAGCTGAAGATATTTAATCCCT GTCTCTATGAGCCTGAACGAGAATTATTGAGTACAAGCGAGAGTGACACT TCTTCATCCGAAGACAAAGGTGACTATGAAACTTGTTCTAAAGGTAGAAG TGGGAGTTTAGATTGGTGCGAGTCTGAGTGCTGCCAAATCGAGACAAGAG AAATTGATTGTTTCAATGAAAAATTTGATCAGGGAGATTTTCAGTGTATT ATTGATAGGCAACAATTCCCAAAAATGTGCCTTGATGAGGACATTTTGAG GAGAATGTGCTGACTGGCCTTCACGAGACAAAAGGAGATCATTTGGAAGA GATACCGTCGAATAGATCCCTAAGATACGCCGCAGCGTACAGGCAGTGTT CATGGTGGGTTTTCAAAAGATTGAGAAAAAACAATCGCTGAGTTCTCCTA TCATGACATCATGTGTGCTTTCAAAGACGCGAAGTACGTCGTGCAGTGAC CCTGAAGGATAAAGGAAGGTGAAAAAAAACTAGGGCGAATCATTTTTTTG ATTGATGGGTCTGTCAATTCATTCGTTAGTGCAGTGCATTAATAAGTTCA TTTTCCAGTTTGCATTGGATTACACGTTGTTTTTTTTATTAGAACCCAGT TTGTAAGAACATTTAGGCTGAAATTTGGCAAAAATTTAAGAACATTATAA GAACATGTCCAGCCTGAGAATCGAATAGTTTGGCGAAATTCGCTTAAAAA TCTTTAGATTTCTTAAGGAATTTTGTGCAATTATTACCGTAATTATTCCT CTCATCTAAAAATAATAGCAAATTTACTCGATTTTTAACCCAATATCGAC ATTCAAAGGTTTTATTAGATTTTAAGCAAATCGATTTCAAGAACGTCAAT AAGAACATTTCAGGCTGAAAATTGATGAGAAAATAGGCACATCCAGCCTC AGCTAAAATTAAGACGTTCTAATAAAAAAAAAACGTGTAACATCCCAAGT TTCCGTATCATCGATTCCGTTTGGGTTTACTATCTATTGAATTGACACTA AAAGCTTTGTACTAATTGATGATGTTGGATGGGTCCTTCAGGGACCTGAC ACGTTTAGCCTTTTATTGTGCCCTCCTTTCATTCGACTTTCTTTTAGTTG GTTGTTTGTCTTTAATCGAACAAGTTTGGGATAGCGTCTTCCTTCAGTAG TCTATGCGATGAAAGTCCTAGGATGAGTTTGTGCTAAAAAAAAACAACTT TTGGTGTTTTTTTTTTCGCTTTGTATTTTGCAACCACCTTCTCTTGAGTG TTTCGTCCTTAGGTAGCTTGTATAAAGATACTTTCACTCTTTGGCACGTG AGTTGTTAGTACAGTTCACTGCTCCAAGGCATGGTGACACCCCCTTCTCA CACGATGGGATTTTTCAACCAGTGGGGATGGAAAAATAACTGACTTAAAC TCGATGAGGATTGATATTTCCATAGTTTTTATGGCTGGGGATTTTAATTC TTTTGTTTTCAAGTCAGAAAATTCAGTGGGAATTGGAAAAATACCATAAC ATTGTGCCGCAGGATTGATATGGTTTATTTGATTATCTCAAAGAATTCTT TATGATTATCTTCAGTGTGGACAAAAATTGAGAGATGATTTTCCACTGGG GACGATATTCTGGCCAATTTTACCAGTGGGAAGGGGTCCCAATGGGTCTG TGAGAAGGGGGTGTATGGTGGGAAGAAAAGTAAATACATACATCAACTTC ACTTGGAAAACAGTCCAAACTAACTATAAAATTGAGATAAAACTAACTCA ATCTCGTATGAAAAATGTACACTTTTGCGTTTCTCTTTTTTCTCAATTTT CTCTGAACAGCCTCCGTGACGTCACATACACAAAATTGCTTTTTAAAAAG GGGCTTTCTGTAAACAAAAGAATTTAACTCCATTAAATAAAAATCATTCT TCTAGTCAAATCAAGTATCCCTGATTCATTAAAACCAATAAAATTAAAAA ATGAGGAGTCAAATTTTTACCGAACCATTCCTTTAACGTCTTTTTAAGGT TCTTTTTCTTTTTAAGCCCTTAACCATTGATTGTTTGGACGCTTCAGTTA AATGTTTGCTTTATTTTCCACCAGGTTCTGATGGTCGATGGGTGTTGGAT GGAGTTGCAAGTTATGTGTACACTTATTGTAAATATTACACAGCGTATAC ACCCTTCAACAAATATTTACCGTGGGTTAGACAATACGTCAGTGGTGTTT AGAAGAACGATATGGAAATCATTAAAAGAACTTATAATGTAAAGATACGT GCAAATCGGAATAAAATTTACTTATCAATCCAGTATAGATTCTTAGTGGG GAAAACATCCTCCACCTTGCTCGATAGCCATGGTGGATAAACAATCTCTC GAAAACGTAACCGAACTTTAAATCTCGTGATCCAAACTCCCAATGTTTAC TAAAAAACCTTTGACAAAAAC
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00068536TCONS_00068536Clytia hemisphaericatranscript
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_485supercontigscaffold_485:310675..321295 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0 0 0 0 0.15 0.06 0.44 0.14 0.55 0.18 0.06 0.72 6.7 4.66 5.27 17.15 15.16 18.32 71.13 60.79 56.76 54.49 26.45 31.44 17.45 15.8 0 0 0.06 0.06