XLOC_042895 (gene) - C. hemisphaerica

Overview
NameXLOC_042895
Unique NameXLOC_042895
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_49:419824..428614+

Legend: transcript
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_042895 ID=XLOC_042895|Name=XLOC_042895|organism=Clytia hemisphaerica|type=gene|length=8791bp|location=Sequence derived from alignment at scaffold_49:419824..428614+ (Clytia hemisphaerica)
AAgcattttaactgtaaattcTATGTTTGTAATTTTCAACTTGTAATGAT TCTTGTTCAAATGATGACGATTGGGCTATTGTCATAATTGTTCGTGTAGA TTGAGTCATTGTAGCATGTAGTAGTTTTTCATGTAAGTCggttttttaat tcaattaaaCATATTTTTATCACTTAATTTACATATATcttcatttgtta aaatttaaaatccataTATTACTGTCAGTTTCACGCCTTGTGCGATCATC AGATATACTATCGCACAAGGCGTGAAACTGACAGTAATAtatggatttta aattttaacaaatgaaaatatatgtATCAAAGCTCTACCCAGTGTATCGA GCACTGTTTCAACATTTGTTTTCAATAATGGTATCACTTAATTTATAAGT ATACAAGTATACATACAATCTAAAGACAGGAACGACAAGACTTCTTCTCT ACTGAAAAAAATTGATTCGACCTCAGTCCAATAGCATACATATTTTTTAA GAAGAACATCCAAAATTTTTGAAGCCTTCGGGTGATCTTAAGTTTTTGAG TTTCAAGCCTAAATTGTTGTTAACATGTTCATATTTTCACCATTTTGTGC GAACTTTTGTCCGTTTTCCTAAGGAATCGGGTGTTTTAGAGTATGCAAAG AATTCGTTACTCAAACGCCAAGGAACGCCAAATATATCCTTCAATTTCAG CTACACTGGAAAATTGACTTTGTTTTTATACCCATTTAGAATTTAATGGA AAAAATTGCACTCCAAAGCCATTCCCAAAGGATTTTTTGAGCTGAGAATA Ataatatttctatccccattgggatttcgatggacatttttatccccatt gtgggaaaaagtttcaccggggctgtgagacgtCGGTGATACCGCAGTTG TACGGATTATAAGGCTGCTGTGATCTTTGAAAGAAATAAAACACCTTTGC TGAAATTTTATTCACTATTTCTCAAAACTTATTCGATTATCTCACCATAG GTAGTTTATGTTTGATGTAATGGTTCGTTCATGTCCAATCACTCATCATC CATCAATACCACCACTGATAGTCACCTGCCTATCAATAAACCTAACCTGA GTCAAAGCACCGACAATGGAAGTTCTCCACGAAAACGACCGTCGCTCATT CCGACAAAAATATACCCAAACATTCGTCGGAAAAAGAAAGTCGGGAAAAA CGAACGTGAGCGGTTCTTGCAGACTTTTGAAGACCGATCCACCTTTCATA TTAAAGAAGTTGATTTAGGATTCTTGGAACGTAAGCGAGTTGTGCTTAAA AAGAAACAGGAACTTTTGAATAAAACATTACTGGCGAAtaagaataaaaa caaagacaatGATACAGTAAAACTGGAACCGAAAATTATTTCACCAGTTG atccaaatattgacaaaattgataagaattcgaaaaatggggattttaaa aatcttgaacaTAATGGCAGACTACAATCACCTCCAAAAGAAAAATCTCC AACGTTTAGTTCGGGACCAATTCACAGTCCAAAAGAAGAACATGCGAAAA ATCTTCCAAGTCCAAAAGAAGAACACCATAAAAGTGCAGACCAGAATTTT GAAAGGACTAATATTAAAccgaatgaaacaaaaacaNAACATGTCAAAAA TCTTCCAAGTCCAAAAGAAGAACACCATAAAAGTGCAGACCAGAATTTTG AAAGGACTAATATTAAAccgaatgaaacaaaaacaacgatcaatttcaat atttataaTGCAGAAATTGATCAAGGAAAATTAAAATCTGGGAACAAACA GTTAGCTGATGCTAGCAGCCCTACTGGAGAAAGCCCCAAAGCAGAAGGAT CCATAAAACCGATTTTCAATAAATTCCAATCGATTGATATTGATACGAAT TTGGATGAAAACTTAAACAAATCGAAAAGGAAGGATGAAACATTCGAAGA AGAAGCACAAAGAAAAGGAAAGAATCTTATTCGCAACGTTCTATGTTGTC AAACATTGTTTTCAATTGTGTTTTACGTTTTAATAATCGTTTTGGTTGGT GTTTCAGCATTTTTCACTTTCGAAACATTTGAATTACATAAAAAGCATCA CCACCCAAGTATCTACAACCACGACAAACATTTGCATGATTCTAAAAGAT CTAATATCACAAACTATAACAAGACATTGACTTTGACAGATAATCTAACA AACTCTAGTTCTGAATATCAAAACTTTAGTGACAGactgaaagatttttt catacAAATATCAAACGCGACTTTACAGAAAACAAAAGATACAcaagaac aaaaagaagaacaaaagactttagaacaacaaaaacatcattCCCAACTT ATCAATAACAACAATTTGAACAGTAATCTTAACATTGAGGAACAGAATGC AAATACAATAAAGACATCTGAAAATGATAAGAGACAAAAAATCCCTGGGA TACCACAGATCCGCGTCTTGATTCCACCAACTCCTGCTTCACCAACTCCA CAAATAGCTACTACAATCACAATCAAGAAGATACAACCTACACCAGAGCT GTTGACACCAGGAACAACTCAAAAGCCAGCAATAGCTCAATTACCAACAT CAACTACAACAAAAATCAACCCCTTTTTAGAAGCTGCAAAAAGTGTTTTA TCGTCATTGAATATTGGGAATCTTTCACCTCAATCTAAATCTAATTTTAA CGCTGGTAGCATTGACCTCGGTGATAGTACTGACATCAAGAATTCACCAC AAGCTGCCGGAGTCGAGCAACAACCATCAATGGGTCCCACACAAGGATTT GAAAAACAGAATCCTAGATATGGTGACCAACCAAATGGGGGTTTTGATGA TCAGAATATGTTTANAAACAGAATCCTAGGTATGGTGACCAACCAAATGG AGGTTTTGATGATCAGAATATGTTTATGGATAATCGACAACCAGAATCAC CAGTACCAACAAATCAATGGGGATATGAGAATAACTATCAACAACCTTAC TATGATCAAAATAGATTCGAACCACCTTATGGTAGATCGTTTGGAGATTC GGCAGATCCTTATGGACGATACCAGCAACAAGCTCCTCTTTCTCACGGAG ATGCATCCAATTATGAAGGACAACGAAAAGAGGATGACCCTGATTTGAGG AGTTTTGATCCGTTCAAAGATCGAGATCAAGATGTGGAGGATCCTGGCGA TGGATTGAGAAGAAGTTCACATGGAGAAAATGAAAACGATCAAGACTTGA AAACGACCACCAccacaacaactacaacaaccacgACACTTCAACCCACA AcgccaccaccaccaccaccaccgccACCTCCACCTCCACCACAAACAAC CATTCCACCACCTCCAGAAAATCCACCTCAGCCAGAGCCACAACAAAGAA CACCTTTAGTCATAGCAGAGAATGTTGAGCAATATATGTCACCAAGTATT CTGTCTCACGATCCTCTTGAGAATATGGATCGAACCGTTAAATCAGATGC TGTTATCGGTAAAGAAAGACAAATGGACGATAGCAGTGATGACGGCAATG AAGATGAAAGTGAACCAGAAGaggaagaaaaaagtgaaaaacatcATCGA CTAAGTCATCGACATGAGAAATTATTCCCAACAAGACATACACGTGGAAA TGATTTTAAAGAGATGGACGATGATGAAATTATGCCTTTTGATAAAGATA TGAAAAAACATGCTGCCAAAGATGATGGACTTTATGATGATGGTATTGGT GACAATGACAGACCACATCATCGACATTTAGAACCTATGGATCACAAAGA ATCGGATGAATCTGACGATGACCTTAGATTGActgtttcaaaattgaaat catcTCTAACTGACGATTTGAAAGATAttcgaaaaaagttttcaaagatG TCATCAGGGACGAAAGATTTGGAGGATGTGGAAAAAATGATTAATATTCT ACACCATGATGAAGCTGCAGTTGACGACGATGTTGGAGATACTAAAGATT CTGTTAAGGATAAAAAGAAGGATGGTAAGAAGTCTGAAGCAGCTGATACT AAAGATGATGTAGCAGCTACTTTAAAACAGCAACAGAAGATAGGTGTTCA GAAACCAGATGATGCTGGCAAGAACCTCATGTCTCTGATGTTAAGCGAGC AGCAAAAGATACAAGCAGCACAACCAAGTCCTACTCCAGATCTAATGAGT GAATTTGTTGCTtttgagaaatcgaaaattGATAAAACTGCTAAAAAGAG GAAAGTTATTCcgacgaagaagaaaaagaaaacaaaaacagaagTTAAAA CTTACAAACTGAAAACATGTGTCCAAATCAAGGCGTTTAGTGCAGGAACG TTGGTACAGATTGTGGAAGGACCTGATAAGATCGATGATAAAATCAAATA CAATGTTAGAGCTTGTactagaaaaagaaagaaacgaaaattaaaaatga cttGTGAAGATATCACTTATAGAATTTCAACAGGTCGGTTAGCTGTCAAA CCAGTTGGTtgggaaaatggtaaaaagataTATGCAGTGTTTGGGTgtaa gaatgatggttataatGGTGCAATGGCTGATCGTGTGATGAAGAAACAGA TGGAAGAGAAGAGAGATCAGAATGACTTGGCAATGCTTGGTGGTGGAGAC AATGATGAGGACAATGATGACGATGAAAATGGAAACGATGAAGAAAGCGG ATCAACTGATGATGATACTCAAGaggtaaaaattcaaaaagagtTGATCA GTCTCGACCAATCAGAATCTTTGATCCGAGTTTTAAGAAATCAATACCTT AATGGCAGCCGTATTCATTGTGGGCTTTATTTGTAGAtaccttttttcaa taaaaactccGATTAAAAGATATAGCAGTTTTAGGCTTAGTTAGTTGTTA TGTTGTTGAAAATTATCCAGACTCGATCATTTCTCATTTTAGGATACCGA AGAAGACAATGACAATGGTCCAATGACAGTTGACGTAATGGCAGAagcaa acaacaaagaaaagaaagtaaaacAGAAGAACGGTGGCAACGGTGGCAAA CAGATGAAAGATTTGATGAACATGGTTAGTGATATGAAGAAAGAGATAAA GAAACAAGCTAAAACTGAGGTCAAACTGGTAAAGAAAATGAATGGATTGA AAAAGTCAGATGATGGTGATGAAAGTGCTGATTCAGATGATTTGATGAGT GAGAAAGATAATGGGAATATTAGGAAAGGATCGCGGAGGATGAATAttga tgaaaaagatgatttttatGATGGGGATGATGACAGGGAGAAGAAAAGAA ACCGTCGCAAACATAATGAAAATGGCGATTCTGATGAGGACAGTGACGAT TCCGATAAAACTGATGACAATGAAAGTCATTATAAGAGACATCATAAACA CCAAAATAAACATTCCAATGATAATGAAGATGACGATTCATCAAATGACG TTAGGAGATCCGATGTACACCATCACCATCAACATCACACTGAAAAGAAA CACCAATCAGATGAAACAGACGACTCCGATGACGATACTGATGCCGACGA AGATAACGGCAAAAGACACAACAAACGTAAACATCACCATGACAACTCCA TTGACGATTCCGATAGCGACGATGATGACGATGATAGTACTTCTATAAGA AGAAGACATTATAAAGATAGAAACGAGGATAGTGAGGATAATGAAACTCC ACGACGAAGCAGTAAAAGACGGAGATTTAAAATCCGACATGACGACGACT TTGATGATGAAACAGAAGACAATGAGCGACGTTCGAAAGCGACACGGACA CCATTACACGACAATGACGACGATGGCGAGCACGAAGAGGATTTTATGAG ACATCAACGAGAAGAGCAATCTCTTGACGATCAAGGTGATGGTGATGATG ACAATGATGGTGAGAATGCAGATATTGGTGATGTTCTTCAAGAAACAAGA AGATCTGGCCATAGATCAGGTTAGATATTTCAATACAATACCCGATTCTA TATTTATTCTTCTTTCCGAGCACCTTACTGCAATTGTCTCAAGCCTATCC AAGCATTTAAAGTAGCTCATTTTTGCCAATCAATAACTCGATATTAAGGT ATTCAGGCTTAGGTATAAAAACTAAGCTGACAGGTGGTGCTAAGGCCTCT TTCGTTCTTTTCTTCTAAATCTTAGACCGAAGTACTATTCCATACAATTC ACATAATAGGAAAATGGAAGAAACACCGGAGACAACCAATGATCAGGATG AGACAAATAATGAAGATGAAGAGCAAGAGGAGGAAGACCAAGGTGAAAAT GAGGAATCAGAAGATGGCGAAGAATCACAAAAGAGCAATCTGGAAACATC ACAGATTCATACACCAGTAAATAGCCCAATATACAAAAGAAACAGACAAC AATATGGTCCAGGAAATGGAGGTTTGCAAAGAAGGGGAGATGTGGACAGA TATCGATCACAGATGATGGATACTAGACTAACCGACGATAGCCAGCAAGA TTCTGATGACTTGATGAATGATCAAGGAATGGATTATGGGGCACCAAACC AGCAAAAGGTTATTGACAGAGGTGTCAATGATGAGCAACAAGGTAAATct ctttcaaaatctttttttggacCTAATGCACTTTCACAGCTCCAACGGGA tcctttcccactggaaaaattggtcaaaatatcgtccccggtgtagaatt atcctccaatttttccccccaactgaaaataatcaagtaAGCCAATCCTA GCTGAAAAACTTTATGCTTCTGACCTGTAAAATTCTaccgggtttgtgag aaggggtaATAAATAATATGATTTCTAGACATCTTGGTGCTTTATTTACT TTGATCATTAGCAAAATTAAAGTTCGCATTTTGTTACTTCATAAAGGTGA ATCTCAACCACCACACGAGATGGAGTTTAATGGTGTTACATACATTATGA AAGACCATAGAGAAGAACCAACGAATACTCCAAATCAAATCACTTATAAT GGTGTCAATTACATTGTTAAGGATAATGGCAGAGGTGAAAACAGGGAAGG GAATGGAGGCTTTCAAAGATTCTCAGATGCCAACGAGGAGGATGTTGATT TGCAGGAGGGAAGAGAAACGTTACCGTTGACTATGGAGGCAACACCTTCT CCTTTTGAAACAATACCCTTATTACCACCAACGACCAAGCAACCTGTAGA TTCCTCATCCAACAATGTTGCTGAAGTCATTAAAGCAATTCTACCAGAAG TGGTACGAACCGTCAAAGAAGCAAATACGCCAATcgaaacaaaacagaaa agagattttattcCAACGATAGCTACAACAACCACAGCATTGACGACAAC TCCAACAACAGCACGATCTCCTCCAAAGAAGGAAGATACTTCACAGATCG ATCTCATTCTAAGTGGCTTAAAAGCTCTAGGACTTGGCAAAGTAAccaaa aaagagaaattggTTGAGGACCCACCAAACAAAGTAGTACACGTGAAACC AGCAACACCATCGCCCACTCCACCACCAACACTACCACCGTCGCCACCAC CCAAACCAAAAACACCAGCACCAACTACAACCACAACGACACCAAAAACA GTTCATCTCCAACCTCCGATTCCACATTTAGTGAATCTACATGATCCAAG ACAAATTCGTATCTTGTGCTTTGGGGATAGTTTAACAGCAGGGTATAACA AACATGGTAAAAGCTTCTATCCTTATTGTTCACCTCTTGGTAATATACTT CGATATCATTCACAACTTAACATTTACACTGAAGCTAAAGGAATTGTTGG GGAAATGGCACATAAACAAATGACACATCGTTTACCATTGGTTCTTGGAA ACGCAACCATGCAATATGATTGGATAATCATTCTAGGAGGAACGAATGAT ATTTTACATGTGAAAAATTTTGGNTATGCAATATGATTGGATAATCATTT TAGGAGGAACGAATGATATTTTACATGTGAAAAACTTTGGAGATGATGAT GAATTTTTAAACCAATTAGAAACAATCTGGCAACCACGTATCACTAAAGA TATTGAACGTTTACACCAGATAGCGTACCAATATAACGCACATACCATGT TGCTGACAGTGCCGGAGAACTCAATAGAAGCATGGCCTGATTATCGACCA TTATTTAAAATGCGAGAAAAGATAAACGAATCTTTAAGAGATTTTGCGTA TGGAAGTAACGGTAGAACTGTACTTTGCGATTTAGCCAAGATCGTTCCAA GACATTCGTTAACTCCAGTTATGGAGAATATTTTATGGGACGATCATCTT CATATGACACCACAAGGCTACACTAAAATGGCTCAAGGAGTCTTTGAATG CTTGAAACCTTATCTCCCCAAcacaaacaaatgaaaattataGCATCCTT TATTTATCTTTTGTTGGTTGAGTTATTGATTTCagaacaaatttttttat aagaataaattattTAAGAGCCAAAAAGGATATCCGCCAAAAATACAACA AGCTCTAAAACATGTGGAAAGCATTACTAGACGTGTTAAGTTTGTTTTAC CTGAGATATTTTCTACTCATATATATGAATGATTTAAAAATGGTGACTGA TTTTGAAcaatattttcagaattaattttcttaaatgcagaagattttca aggaaaatttgggcaatattttttacaatagaatatttttgtatgtaatg taaataaatttgatatttttgtttcgatatatagtttttttataattttg taaTATCTacaaaaaactatttaaaaatttttattaatccC
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00068786TCONS_00068786Clytia hemisphaericatranscript
TCONS_00068787TCONS_00068787Clytia hemisphaericatranscript
TCONS_00068788TCONS_00068788Clytia hemisphaericatranscript
TCONS_00068789TCONS_00068789Clytia hemisphaericatranscript
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_49supercontigscaffold_49:419824..428614 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0 0 0 0 0 0.01 3.01 3.69 0.8 0.77 0.75 0.5 4.21 4.32 2.08 6.89 3.67 3.91 0.03 0.02 2.7 2.9 1.03 1.37 3.46 5.05 0.37 0.17 0 0