XLOC_043197 (gene) - C. hemisphaerica

Overview
NameXLOC_043197
Unique NameXLOC_043197
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_497:106291..110243+

Legend: transcript
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_043197 ID=XLOC_043197|Name=XLOC_043197|organism=Clytia hemisphaerica|type=gene|length=3953bp|location=Sequence derived from alignment at scaffold_497:106291..110243+ (Clytia hemisphaerica)
ttaaaaatgtattttaaaaGATTACTGAGTGATTTTCAATTGTTCTTTAG
ATCTGGATTTTCCAACAGTTTTGGCATCACAATTGACTTATGAAGGTCTT
ATTGCAGAATGTTTGGTATCAAAACAGGTGCGtgcttttgatgtttttat
tttagaggTTTGCACAATTTTGAATTGAGAACCTCATCTAATTCGTGGTT
ACGGTGAACAATCTTTTGGGAACAGGAGTACGATCTAATAGGTAAATATT
taccgatttttttttttactataaaaTAGGCAAGTCGATATTTGGTTGAA
TCAGCCCTGATTTCCCAAGATTTATTGCGCCCAGAGATGACCTTTTTAAA
ACTAAAGCATTCACGTTTTAGGTGTTGTTAAATTCGAGAAGAACGTCACA
AGCCAAGATGCACCTTTAACTTTGAGCTTGAATTCTACggataaagtaaa
aaaaaactttgtcaaAGTTTAAATTATCCTTGGATTCCCGAGGACTAAGA
GATTCTAAAACCATGTTTAGACGTTACAGTTCCGTATCGCTCCGGTGTTG
TATTTGTTACGGATAGCAAGTGTTCAAACtcatttcggaacgtttcggag
taAGAAAatggagcagttccgttccgatgaaaatagaggagcgaaaccgt
ttcgatctgttttgctttgtaaggtcttcttttttgacggtTTTAAATTT
TCGTTCACACAGTGTTttggaaccgtttcgtttcggagcgaaacggaacg
tagcgtgtgaacgtggtctTAAAATTTAGCTTCCTCGGTATAAAATAACG
AATTTGTTACTAATGCCGTCGTTCTAGATAAGGTTCCACTTTTTGGAGTA
GGATTCCACTTGTTTTTCCGGGTTATCCCCTTTGTTTCTTCCGAGACAGC
CGGCTGAAATAGTAAATCGTTTTTCTAGAGGTTGACACGGAAAACAGCTG
GTATATACGGAAATTGACTAAACTTTCCGAAGCTCATTTTTTAATTAGCA
TGAAATTTAGTCTTTTTCCGCTTGAAATTAGCAGTTGAATCTTTTCTTGC
ATCTATCAAgtttgttttaaatttattaTATAAAGTTTCCGAGAATTTTC
GATTGTTTTGTACctaattcattaaaaaaaaacactgctTGTTTTTGgcc
ttttgctttttctttcttgttatCCCTTTTCCCTTTACTCTGTAGGAAAC
AATGAAttaaaattccccaaaaaacgGTGTTACAGgtccggcggaacaac
cgtaaaagtggggaggctgaaagctcaaaatgagatgaaattcgctagga
atttgagaaaaatttgctcaaaagtggaaAGGCTTAAGTTTCCCCAGTCT
CCCCGTTTCCGCCGGGCCTGTACTATCAAGTttgattgaatttatttttg
gtGTTAATTCGAATTTCACTATGCCTCTAAGTCTTCGCATaacattttat
ttcatatactttattgaatatttttagGTTTTCGCTGAGATTCGAAGGAT
GCATATCACAGGGGTGTTTCCCCTGTTGAGTTCAAAAGCAAGACAATTGC
AGAGTGGATATGATGTATGAATTTCcatttaattttatttcatttttact
ttGCTTTAGCGTTAATCTCCATGATTTTAtaggattagaaccattgacgG
GCTAGACACGAAACTTCTGGATGGGAAAATGgtgccacttatttcccatc
ctaaACGCGTAACCTGCGTGTTTTCCCAAAAACgccaaattgaaaagaaa
aaatatcacCAGAAAAAATTATGccgcgtgaaaacaaagaaagagataga
ttcaatccgtcattctaAACGAGGCGCAattcttaaggcttcactttttc
ttgctttaggAATGTTGAAATTcatctctagccccttcggtGATTTAAAC
TCTATGACTTTAAACTCAATCATTCAGGATAAAACCCATCTTGATCACGT
TTAACTTGCCATATCTATGGAAATAGAAACAAGCATATTATTTTGAGAAG
CGCAAAGTTCACCCCACTTAACGTTATCTTGTTTGGTTATTGGTTTActg
gaaaatatcaaaaatgtttttttccttttagaaaaaagataatTTATCTT
CGGTGTCGGACTTCAAGCAATTTGTTTCGGAAGATTTGAAGGAATTGAAA
TCACAACACAAATCATTAGCACTACGTAAGAAATCCAAGTTTAATGAAAA
CTTTGTTTGTACTGGGGAACTTGTGGTATAAGCACGGCTGTTTGCAACTG
AAGCTTTTCTACCTTATTGGAATCATTTTTGCGGGAACTGATATTCGcgg
tcaaaaataaaaatcggaaaattgcatttcgtgggttttaatttttgcgg
ttttgcccttttttggaaaaattattttcatcttcctagggatttttcta
atttttcgataaaattggaaaaaaatgtatttCGCGGGTTAAGGTAGATA
AGGTAGATTGCGAAGTataaaaatatcacttttagAATAAATTAAAACAT
TATCTAAATTAGAATTCCATTCTTTCTGTCAGACATTGGCGCATGTGAGG
CCatcatgaagaagaaaacggaGGGAAGCTTTGAAGATGTATTGGCTATC
GAGCAAGGtatttttttactctttactcGCATTAGAGGCAGAATTTTGAT
GTCATTTCCTTGTGCTGCCAAGAGTTGATAAGTGCAACCCTTATAGGTTT
ATAGGTTTAAAGGTGTATTAGGCTGGACAGAAATATGCGCTGATAGATAC
AGGAAAAATGGCATCCCCTGGTAGAATGTAGTGTTAAATTCTCTCaaata
tttctctaattcgaaaaagATTCTCGATCCTTTgaagatcaaattagaga
gagtcaactgcgCTATATCTTGTCGAAATGTTGATGTTTTTGTCATCGAt
aagttattacttttttcatattctttTTTAAGCAATGTTTGAGGACACGC
AATATAAAGATTCGTTGAATTTTGTTGAAACGTGTATACAGAGACaggta
ttttgtttttattaaacctcattatttttgttattttgttgtcCTAAAAC
TtgaagttttattttgtttattaagAATTGAAAAATGCCTTGATTATGCA
GGGCACACTTTATAATGGCTCTACATGCATgtaattaaaaaatcttgata
TTTCAATATAATCATAAAAAACACTGCATGCAGCTGCATGTAAACACTAC
TTATTCCTTTGAAGAGGATCTCTCTATTGTGTTCTTTGAACTGCGCCCAA
CTCCTTCATCCCTCTTTTTCACTCGAATTTCTTGCAATGAGTACAGAACT
TGCGTTTACGTGTCATGAGTAAGCATGAGTGTATCCAACTGATGATTTAC
TAAGCCAGGATTTTCTTTACTCAAGTAAGTTATAGGCTTAATCCACTCCA
AAAACAATTATGATTTGGAGAATAACAAAAAGGCAGCAATCATTCTTCTC
TTGAATATTACAGTGATAAATTATTTAAGCAGGTAATGGGACTGGGGGCT
GCCCTTGATTGCTCAACGATTTGATGGACCTAAATTTTAAGGGGGGCTCT
TTTTTAGCCTGTGGGCTGAACCTGGACTGACGTTATGCACACGTTACGTC
TTTGAAGGCTACTCCTTTCTTGTTGCCCCTAAATAATTGTTTTCTTCTAT
TTTAGAACTGCTTGAGGATGATGAGCTTGCTTTCAGTTTGCAAAGGAGGT
ACAGTAAATTCTTGTGATATTTCGCCTAACGGTTCAACAAATTTTATCCC
AATCTCAAATCTTTGAAGTCTAAATTGACCCCTTACCCAACCTGATGGTA
ATTTTCAGGGGTTTTTTTTCCAACTACACCTCAAAACCCTACTGCTCTAA
CAGTATTACCGATGGACAATAGATTAGTGAAactaaatttctttcttttt
ctaaagGTATCGATTCAAAAACATACAAAAGTTTGCGGACACAATTTTTA
CAT
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00069319TCONS_00069319Clytia hemisphaericatranscript
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_497supercontigscaffold_497:106291..110243 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
3.98	4.65	1.56	2.08	4.09	4.68	7.51	8.59	5.37	4.08	6.3	4.91	4.79	5.54	2.02	2.9	3.14	3.03	2.38	1.25	1.76	1.55	3.3	2.62	6.14	7.9	1.67	1.17	1.66	1.43