XLOC_043293 (gene) - C. hemisphaerica

Overview
NameXLOC_043293
Unique NameXLOC_043293
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_50:229283..238092-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_043293 ID=XLOC_043293|Name=XLOC_043293|organism=Clytia hemisphaerica|type=gene|length=8810bp|location=Sequence derived from alignment at scaffold_50:229283..238092- (Clytia hemisphaerica)
TTTTGTCATTATTTGCATGCGCATTTTATATTTTTACATGTCGGCCAACT
TTCTTTTCAAATCGTCAAACGTGGGTACAGAACTTCCACAAAGATTATAT
ACAACATGGACAAACCAAAGTTAGCTCGTGTAAGTCGCATGTTATCAATA
TTCACTCTTTCAAATTTCATATAACGTAATCAAATTCCTTACAACCAGTT
TTTATGCAACTAAACTCATTTCATAGGAAAATTTTAGCTGGTAGGCAACT
AAGGGATCTTTGACAAAAAACTTTCGAATTTTTTATCGACATTGGGCCGA
TAAGTGGGTGGGGGGGGGGTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNCCATTCATTGTTAATACATTTTTTAT
TTGAAAGTAATCTCTTCATGGAATAAAAAGATATAGTCAAATCTTGTAGG
GTCATTTTTCAAAATTTTTTTGCCAAATTCAATTTTCGCATTTCGCCATT
TTACCCTACGCAAATGCACGTGGCGCGCTTGTTCGCAGCTTTAAAAGTAC
AGTTTTGAACTAGCTTTGATAAAAAAACTCTTTTATCATTGGCCAGCGCG
CTGCCTTTACCTTCGAAATGTTGCGACTTCATCTCTTCATTTTAAATTTG
TGATTAACAATATCAATGGTATGAAAAAACTCAATGTTGGCACAAATAGA
CAAAAATTCAACGATGACGGGTGGGAAGGCGATGGCGGACAATATTGGAG
GAAATTGTGTTTTCAAAGATGTAAAAGTTACATTTAAAAAATTTTGGCCG
ATAAGAGCAAGGGTGGGGGTGGGGTCTGAAGCTTATTGGCCCAATGCTGA
TAAAAAATTCAAAAGTTTTGTGTCGAAGACCCCTAATACACCTTTCCTGT
TATCCATTTTGTAGTTTCTGGGATGGTGTAAACAAACCTGCTTTTGTCTG
CGTATCCTGCTGGGGTCTCAAATAACTTGTGTGTGTTGTCTGACTTACTG
ATAATTTGCTAACTTTTCGAAATCTGTGTGCGCATTATTTTGTTGCTCTC
CACCGCTTGGTCTCTGGGCAGTCTGGGAAATCCCTCATTGCAGTATACTG
CAATTGTGGTAGTTTTCATTCATGGTTAGCCTACAAAGGCTTGTAATGGC
TACATATAGTGCTGGTCAATAAAGATAAACAAACATCAACTGTAAAAAAT
CGAACGAGAAGATAGCTTTTCTTTATTAAAAGAATCTGATCTACAGCAAA
AATATTTTGTCTGTGCGTTAAAAAGGTATGATCAATCATGTACCAAAATT
GCCTGTTTTCTCCTTCTGTTTCTTGAATATACTGGAATTGCGGTACTGCT
ATTGCAGTAAAAAATTGCTATGTATATACCGCAATTGAGGGATTTCCCTG
ACTGCTGGAGGTACCTGTTTTTGCTTGCGTTTCCTTAGGTTAAGTTAGTT
TGAGCTTTTCTTAAGTTCTATCAATTAAAATCCCTCAAATTTAGGTATGT
TCTTTCTATTCATTATATTAGGGGCCATTGACAAAAGAAAATCCTTATTT
TAGCCTCAGGCTCAGCTTAAACGGTGTACTAATTCCAACTTTTGTTCTTG
CTTTTGAAACTTATGTAAACATTCCGGTATGTTTCTGATGTACTTGACTA
CCGGTTGTCAAACCGGGATAAAACAGGGGTACTGCAATAAAAAGTTATGT
AAGAAAGACCATCATCTCAACGTTCTTAACCAATAACCTTTGATAGAATC
GTTCCCCTAATTGTCTTCCTCTATCTTATGTACTTCAGAAAAACCAAAAA
CATTTCCCTTAAAAGGTTAGCCTTACAAAGCCCTAGCTATTAATATAACC
CCCTGGTTGAATCTTTGTTTTCTTATCCTGTAAATATAACGAACAGCTAT
TCTACAATATTGCTGTCACATGACTTTTTTCTACCGTGTGATGCAAATCG
CACATTTTCATTGGATTGAATTCAGTTGATTTGATTTGATTTTGATTATT
TCTTTTTCTTTTGCCATTATGTAATAAAAATTCTACAATGTTTGGGGAAC
TCAAATATCTAAAAGTTTTTCTATTTTCATGGAAAAATGAGCTTTATAGG
CAATTACTTTGCCAAAGGTTTGACTTTTCTTTGTGAATTTTCATCTTCAA
TCTTTATTTTAATCTTGGTATTTTCTAGAACTATTTGGGAGTAGAGAGCT
TTTTANAAGGTTTGACTTTTCTTTGTGAATTTTCATCTTCAATCTTTATT
TTAATCTTGGTATTTTCTAGAACTATTTGGGAGTAGAGAGCTTTTTACAT
ATCTTAAAAAGGTTTACTAATTCTTTAGATATAGTCAAAAGTTTGACATC
GGTGAAAACTTATTTCTTTGATCGAACATTGACACATGTTTTTTCCAAAT
CATCAGACACATGTGCTCTCACCTAATAATGAGTTCATTTCCCTCCCAAA
CAATTTTGTTGGCACACATTTTCCAAGGCCATATCTGAGAAGTTTGAATT
TCGGGAAAGGTGTATTGTGCAATTGGCGTTGGCCTTCCCTAACCCCTTGC
AGGCAATAGATTGAACATGGTAGTTAAGTCTAGGAATACTACTAAATAAA
GGGACATTGCTTATAATGAGGGACAGTCATTATGATAACAGGTTATGTTT
TATCTTCCACTTTAAAGGCTGTTTTTACCAAAATTTTAGTGATTTCATGA
GGGGCAGCGTCAGTGAGCCAGTTGTTAAAAAGGCATGAGAAATGATGTAA
GAAAGGGAATCCCTAGATTATTGGACACTGTCCCTAAATTCAGGAACTAA
AAAACTCTAAATATCTTATGAAAGGTGCACAAGAGGTTTCTAAATTGGCA
CTTCATTGGAATTGTGTTATTACAGCCATCTTTGTTAAGTTAGAATTCAA
AAAATTAACGCAGTCAAAGGCTCAATCAGCAAATTTGATATACTTTTGTT
TATTAAAAAAGTGCATGTGAAATGTGTAAAGTCTATTCTTGATTCTCAGA
ATTTTTATTTGTTAAAAGCACAGGAAAAAGTAGCTGTAACAAAAATAACT
CTAGCATAAACTCCCTTATTTTTCATGTGAGATATTTGGGGTAGTTTTTT
ATTATTTTCTTTTTCTTTTTTCTTTCCAGGTTATGAAGATTCTTGGAAGA
ACTGGCTCACAAGGTCAATGTACACAGGTAAAAAGTCTATCTATATTTCT
TGCCAGTCTTTTTCTTTCTCGTGGGGATCTACAGTGATACGTTTGAATAC
TCTTGGTTGTGTATAGTTCATTTTAGTAGGCCTGGGTTAATGAAATTTCA
TTAAAATTGTACAAATTTGGAACAAAGTTGACAGTTGGGCAAACCTATAA
TTTCAAAAGCCAAGGCATGAAGGCACAATGAAAGTTAACATTTTTGGTGG
TAGTTTTTAACTGGGGTCCGGTTGTCCGAATCAAGTTTTGATTATTTTGT
GAAACGTGTCATAAAGCCCAGCTAGAATCATTTACAATTCAAATTTCTAA
AGTGCTGATAACTTCTGAACTATTTATGCAATCATTTTCAAATTTTGACA
CATGCCAGGCATTGACAATGTGAATAGCACACCGCTATGCAAACGTCATA
ATTATTACTTTTAACATTTGACCGAAATTCAATCCCACAATCCTTTTCAT
CTTGATTCGTAATGCGTGCAAGTTATTACTTTTGTATCGTCAATAAGTGT
AATTGACTTGCGAAAGCAATTAATGCAAAGGATGATGGGATCAAAACTCG
GACAAACAGTAAATTTGATGTCTATTTTTAGAATCACTATGGTATGCTAT
TGAAAAAATAATTTTAAAAGTTGATGTCATCATTTATGACGTTTACTCAT
CTTTCGCATGGATATTAAAAATTCTTAATGGAAATGCAAACCGGCAATTA
CACGCTTTTTCTTTTATAAGAATAACTTCTATAAGAATATCAGGGTGAGA
TTTCGGGTTTAAAACGATAGGCCTATTGTTTAGAACAATAGAAAAATAAG
AATAATGCTTACCCTCAACCAAAGTACACTATTCTTATAAAAAAAAAGCG
TGTATGTTAAGCAACAATTTTTATCTTTATGAATCTTCAAACAAAATCTG
AATATTTTTATTGGATTGACATTTTTGTTATATTTTGGTGGAAATTTTGC
TTTTTGGATGATGTCATCAATTTCTTTTTCTTTCTGGAATTTTGTGTCAT
GATGAAGAATATCTGTACCAATTTTCATGGCCATAGCTCTTCTTCCCCTG
GGGCTATAAAAATCAAATCAGTTTGGGGTTAATAGGGTTAAGGTACTCTT
CTCTTGTTAAATATTTAAGAGCTGTGGGAAAGGTTGGAAAATCTATTAAA
TGCTGCATTGGTGTCAGTAGTACATACAGTCCTGATAAGCAGGAATCACA
TAGTGCATTGCCTACCAGTCTGGAAACTTCGAAAGTTAAAAGAAAAGTTC
GTTTTTGGATGGTATAGCCTTTTCCTTTAGTCTGACTAATGAGACTGATG
GGTGCTTAATGCAAATTGAGAAGGATGAGGAAAGTGTGCTGTGCCAGTCT
AGATCCTTACACTTATCGTCCTTCTTAATTTGCATTTCAGTGTTGAAGCA
TCTTGTGAATGAAAATGAGTGCCAAGAAGAAGCAGAAAAGTGGATGGTTG
TTATGTGACCAGTGCGATAATAATGTGTTAACAAAGTCAGAACACAAGTG
TGGTGTTGATACTGGATCGTATTTTGATGGAGAAAGACTGGTTGCTTTGG
TTAGAAGCAATGATGCTATAAATGAACCAATGCTTGAATCGCAAAATCAC
TTAGTCTTGATACATCCAACGACCATCAAGTTGTGTTCATTTCAAGTAGC
TGGTTCTATCCTCGTCACAAATGGAGTTCAGAAGACCTTTTGTATTGTAT
GGCCTTCAACCAAAGTCAGTCTGGGTGATGTGGTTATCAGTCCAGTTAAG
CTTCGTTCGATTCAATGTCAGTATAATCAGAGTGTCCTTCTAGGCAGATT
AACTTTACCACCCGTCATTGCTGATTCTGCTCAAATTACGGTACCTGGAA
TTAAGTCAGTAAATTTTGACGAACTCAGAATATCAATCATTGATATCCTG
GACAAGGCTTTGATATGTGCTGGAGATCATCTAGATGTTCTTTTTAACGG
AGTAATCTATAACATTGTAATAGACAACGTTGAAGTGGATGTTTGTCAAC
AACTTTCTTCCTTGCAAATTGACATTGAATCCAAAATTGGTTACGTGTTT
AGTAAAGAGCATACAGTTTTGGAGTTTGGTAAGGGTAGACCAGACTTGGA
AGTTGAAGTACTACCTCTTCAACCTGCAAGACCATTTGGTGGCCTCCACA
AGCAAGAACGTCATTTGAAAGACTTCATTCTTCATTCACTTGATAACAAG
CTTTATAAGGAATACGGTATTTCCTTACCTAAAGGACTCTTAGCTTATGG
TCCAAGTGGTACAGGTAAATCACTTTTAGTGAAATCTTATGTCAAACAAT
TTCCTGGTATATATACAAGGGAAATTAATGGACCTGAACTCACAAGTAAA
TTTTTTGGGGAAACAGAACAAAACCTGAGAGACATATTTACCGATTGTCA
AGAGAACGCACCGTCAATACTTGTTATTGATGAATTTGATACATTGTGCC
CTAAAAGAACTGACAACAGCAATGATTCAGAAAGGCGTATTGTTGCCACA
ATGTGTACCTTAATGGATTCGGTCGACCAATCTATGCCATTTGTTGCCAT
TGCATTAACAAACAAGCTTAATGATATCGATTCTGCATTACGGCGTGCTG
GTAGATTCGAAAAGGAAGTTGAATTTTCAGTTCCTAACACCACAGAAAGA
GCTGACATTCTTGTTAAATTGTTAAATGATACAAAGAATAACTTGACGGA
TGATGATATTTTACAGCTTGCTAGTACCACTCATGGATATGTCGGTGGTG
ATCTGAGTGCTCTTTGCAAGGAAGCTGGCTCTACTTTCATCAAGCGTAAG
AATCGTGATCAATTGTTACCTGATTTGGTGACTAAAGATGATTTTTCCGA
CGCTTTGTGTGTAGTTCGTCCAAGTGCACTCAAGGCAATGACAGTTGATG
TACCAAAGGTCTATTGGAAGGATGTCGGTGGCCAGGATGAAGTGAAGCAA
AAATTGAAAGAAGCTGTAGAATGGCCTCTCAAGCATTCTGCATCATTCAG
TCGTCTCGGTATTAAGCCACCTTCTGGTTTGTTGTTATATGGCCCACCAG
GCTGCTCCAAAACTTTGACAGCTAAAGCCCTAGCCACTGAAAGTGATATT
AATTTTATCTCGATCAAGGGACCAGAACTGTTCAATAAATACCTTGGAGA
ATCGGAACGTGCAGTGAGGGAGCTTTTCCATAAAGCGAGAATGTCAGCAC
CTACTATCGTATTCTTTGATGAAATTGATGCCCTGGGTGTTCAGAGGAAA
GGCAAAGAGAATAATGCAGGAGATAAGGTTCTTGCTCAACTCCTTACAGA
ATTAGACGGCGTGGAATCCTTGACTGGTGTGATCGTAGTCGCTGCCACAA
ACCGACCTGACATTATCGATCCAGCACTGGTCCGACCTGGTCGTATTGAT
CGAATGGTTTACGTACCTTTGCCCAATGACAAAACCCGCCGCGAAATCTT
TCAAATCCAGTTTCGGTCTATGCCTATCACTAGTGAAGTATCTATTGAGA
AACTTGTTCGTTCAACGGAAGGTTACTCTGGCGCAGAGATATGTTCAGCT
TGCCAAGAAGCAGGACTTGTGGCGCTTCGTGAAGATATAAACGCGACGAG
CATTACAGAAAAACATTTTGAAAAAGCCTTAGAACAAGTTAAACCAGGAA
CCACAAAAGAAACTGTTCAATTCTATACAGAATTTTCTTTGACGCATTAG
TTATGAACTGTAGACATGTCGTTCATAATATGACATTTAAACCATTTATG
GAATATTTTAGTTTATCATTCTACTTTTTACTTGATCTTATTTTTAGAAA
ATTGAATCGTATACATCTCAATTGATTGCACTTTTTCCATTCTCATCTAA
CAATTTAACAATTTGATTAAGCCTCTCCAGGCGGTAATTTCTTATTTGTA
TACTGATGGTGAAATAAATACATCAGATCAGATTTAAATATGAAGACAGG
CTCTTCTCTCCAGTTAATTCTCAATTGATCGTCGGAAGGGATGCTCGAAA
ATGGCAGTCGAGAAATATTTTAGGCGAAAAATCATTATTACTCTTGGGTT
CCAAATAAACGGCCCTCCCCGCTTGATAATATTTCGATAATTTTCCAACC
CTTCCCGGACCTTATAAGGACCCCTTGTTTCTTAATTTTTAAGAATATTT
TTAGCTGTCAAATAGAAGGCCCCTTATTTTGATCTAAATAGCCTGATTTT
AGCCTATATTTACCTTATTTTCTGTTTTCAGAAGTACAATTTCCAACCCC
CCCCCCCCCCGGCAATTAGGCCCCACGTTTATTTGGAACCTAACAGAATG
AGCTAAAAACCTATTTTTTAACTTAAAATTGCAAAAAATTCTTGAAACAC
GTCTCCCACTTGCCCTACGTTTTGCCCGGATTGGTATTATGCATTTTACT
CTTAAAATTTTTCAGGTACGTGTGGAATTTATCGACGATACCAACCGAAG
CATCATCCGCAACGTGAAAGGACCAGTCCGTGAAGGAGATGTTTTGACTT
TGTTGGAATCTGAGAGAGAAGCTAGGCGATTAAGGTATAAAAAATCTTCA
ATTCGCTTGTTCATGCGAAGGGGGCAAGTTAAAAAAAAATAATGACGTCA
TCGACTCAAAGTATATTTTCCCTCGCCCACCGCAAACTTGCTCTTCTTTC
TATTTTTTAATTTTTGCTTATCTCGGTTGCCTTGTTTTTCTTTTGAATTT
TTGGCTTTCAGTGCTTTTGGATTTACGATTTACGGTTTCTAATCAGCAAG
TAGGAATAACCTCAGAAAAATTTCGAAAAATGAAAAGCAGGAAAATGAAT
TTAACCTGATTTTCTTTTAGGTAACGTCAACCGTGCCGAGCAGTCATGGA
AACACGCATATTGTTAGGGAGAATAAAATAACTTAAAATTCTTCATTGAA
AATTAAAGAC
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00069466TCONS_00069466Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00069466-proteinTCONS_00069466-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_50supercontigscaffold_50:229283..238092 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
2174.36	2036.3	2826.18	3146.43	1385.85	1111.13	1182.05	1315.07	2516.87	2164.78	2649.27	3322.87	4240.33	3935	3854.95	3211.85	4691.02	3678.44	2200.81	2075.12	4021.07	3711.22	2958.7	2787.04	2323.11	2239.46	3620.49	3589.34	2455.42	2534.55