XLOC_043784 (gene) - C. hemisphaerica

Overview
NameXLOC_043784
Unique NameXLOC_043784
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_52:5950..7863-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_043784 ID=XLOC_043784|Name=XLOC_043784|organism=Clytia hemisphaerica|type=gene|length=1914bp|location=Sequence derived from alignment at scaffold_52:5950..7863- (Clytia hemisphaerica)
GCAGGAGAAAATGACAAGACAAAAAGCAAACCGGGGTAAAAGCAAAATAA
ATAATAAGATTTTTGGTTCTATATTGAAAAAATGAAATGATAAGAATTAT
AAAACGTCTTAAATATTTTACAAGAAAGCTAATCCACAGTTCACCAAATA
TTACAATGTTGGAATCTGAGAAACAAAAGAATATTTCTTGCTAGGTTGTT
TATTGATATTTATTTTGTCTTCAGTGAAAGAGGTCTTATCTTCTTCGGTT
TCAAGTTCAAAATCATACTGTTTTGTTATCTCTGTAGAGTGGACACTGCC
AAAAAAATCTGTCAACAAGGTCTTATCTAATGGTCTCTGAAACAAATCAG
AGCGTACATGGGGGTGTGAACGTACAAGATAATAATCACTTGTTTGTTCG
AAGAACTCTTTCATGGTCTTCTTACTATCTGGTTGAACTCCCTCTAGAAA
TTGTAAAATGTAATAAGTCCATCGGTCAATGATTGGAACACCAATCTTTG
GATCATCATGGTGAGATAAAGAGTCTTCCCCAACTTGACTGCTAGCAGCT
GCTAGAATGTTTGGAGAATAACATTTAGCATGGATAGAAGCTGCTTGACA
AGTGTCCGTTAATAACAATAATTCATTGTAGCGACCCTTAAGCCACATCT
GTTCAAAAACATCAGCTAATTCAATGTTTGTAATCTCCTCTGCTTCTTGA
AATTTGAGAAAACCTTCTCCCCCATGCCCAGTAAGATAAACCAAAATATT
ACTCGTTTCATCTGAGAGTAAACGTTTTGAGCGTGGTGAATTTTCATTGA
CACGTCCAGTCAATACTCTAACAAGATTTTCTGGTGTAACTTCATAACCT
TTGTAATCAACTTCTACATTATCACCATAAACATCGATTTTCTGTTGAAC
ATTATTAAAAACTCGAGCAGGACGTGAATTTCTTGGGTTACAAGGCATTT
CATCTGCTAGCATCAATATAATATGACTGTCTGGTATACCTAACCTTTTA
ACGCTGCGATAAACCGACAGAGCATTTGCAATATGTCTATAATTGAACCA
GTATCTTGATGTACATGCTATAACTGCCCAATTATTTGTGTGGTTCTTCC
TAGCTCCAAAAACATTTCCAAATTGGGCATGGAGCACAGCAACAAAAATA
AAAGTATGAAGCCAAGATTTCATTTCTACAAACTGTTAAAAAAAAATTAA
ACTGGGTGACTCAAAAAGAATTAGGACATATATATTGATCCACGTGCAGA
CTGAATCAAGTCTTTCTTGGACCAGCTTGAAATCAGTGTTTCTCTTATAT
TAAAATAAGATTTTAAAATTCAAATTTTGAACGTTTGATATTTCACTTTG
GTCAAAAAGTTTCCAGCTACAGTATATAAAAATAATCATTTTCTTGCAGA
ATTAGCAGTTTTTAAAATAAAAATGAGATAAAATAATTTAGCACATTTTC
ATGTATTTTGAAAAGGGAATTTCAATTTTAAAAGCTTATACTTGAATGGG
ATAAACTGGTTCTTCGGTTTTAAATGTTTATTTTGCTGTTAAAGGGAAAA
TAATTAGTTTGAACGGTGACAGAAAGGATCTTCATCATCCCTTGACTTTT
AACAGCAAGTTTCAAGTATCAAATAAAGTCAATCAATGAGGCGAGGTTTT
TGCAAATCGCGCGGGCGGGATGAGTGCTCTTTTAGTGAACAAAACTTACC
TTGCAAAACCAAGTGGATATTCTATGATAAAGAAGTACGGAGGTAATCAA
ATTTGTCGAATTTGTCAAGAAATAAATCAAAACTGCCAAAGAACCAGCAA
GCCATCTTTGTACATTTTTGTTTTTGCTTTATTTTAATGTTTGATGATTT
CGACAGACGATTCGTGATTCAAATAAAAATGTTCGATCGTTCGACGAATA
TCGTTCGATTTTAT
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00070308TCONS_00070308Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00070308-proteinTCONS_00070308-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_52supercontigscaffold_52:5950..7863 -
Orthologs
The following orthologs are found for this feature:
Ortholog NameDescriptionOrganism
PIGKGPI-anchor transamidase precursor Homo Sapiens
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
40.34	37.81	18.74	16.34	9.78	8.75	10.8	11.45	7.63	6.81	8.14	6.04	5.83	6.99	6.31	6.57	8.27	8.9	4.36	4.71	7.47	6.96	27.05	24.88	6.39	7.3	4.65	4.1	12.05	12.52