XLOC_043827 (gene) - C. hemisphaerica

Overview
NameXLOC_043827
Unique NameXLOC_043827
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_55:123085..132862+

Legend: transcript
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_043827 ID=XLOC_043827|Name=XLOC_043827|organism=Clytia hemisphaerica|type=gene|length=9778bp|location=Sequence derived from alignment at scaffold_55:123085..132862+ (Clytia hemisphaerica)
TGTAatagctctttctttttctttgaattgttGAAACTCGTGATTTGATC AATCTAATACCGGATCTTATTAAAGGGGAGTTCAGACATGAAGAGAAAGT TCAATCACAAAATATTACTATATTGTGAACTTTTGTACGGATGTTTTTTG TGTGACAATTTTTCTCGTGTATCTTTATGTCAgctttttcatgtattttt attttttttaaggaaaaatttcagggaatattttaattttacaaAATCCC AACAAACAAATGAGTATATAATGTTACAACAGTGGCTATGTCTTGTTTTG ATCTCATGTTCCTTGCAACTGGCAACTACCAGGAGGAAAGGTAAGGTTTT ATtgtataaattgcttttttaatGATCTAAGTAATTCGTTGGTCCCTTCT TTCTTGGTTGTTTTGAACTTTCATTATCTAACTTATTTGTTGGTCTTTGT CCTCATCACCCTAATTATATAGTTGAAGATTATATCTTTCTTGGAAAGTT GGTACTTTGATACCAAGTCTTACTTTTGTTTAATTCTTTGCAATAGCATC AGTTTCAATTTCagtaattttctttgaaattcacTTTTCTCAGAGTTCAA GTCTCTCTTTATAGAATTTaggaatttaaaaatttcctaCAATTTGTTAT CGGAATGGaactttcttttccttttttttttgtttttaaagggGAAAGGT TATGGCAATaatgctgaaaatatttgaaatgtacacatctttattttgat aatgAGTTCGCCGATTTCAACCTTCTTCTGCCCCCATTTAGAATTGTTTA TTGAGGTCTTAGATTTAGAATCTTCAAAGTATatagttttctttttcaaa tctaaatgctaaactattccctttatATTTCAGTGTTTGATTACAAGATA TTAAAAGATTTCCCTGCCGAATGTACCGAAGCTACCCGAATAGATGATGG TACCCGGAGATTCGATATGCCAGAAAACTCTCCGACATCTGGCGAAATGG ATAATGAATTAGAACCGGGCTGGTATTGGTTTCTCGGCAGTTCCGGGAAC GTCCTTATGGAAGGACACCCAAAGAATGTGAAACCTGGTGATACTGCACC CAGGTTTTGCAGTACCACATATTCTGGTACCTTGATGGGTAGTCATCCTA CAGAGGAAGAAGGAATTGTGGAAATGAATGTTTGTTTCCGAGCTCGTGAT TGTTATAAAGAGGGCATCAAAACTTGTACTTGTCATAGTATCAATACTAT TTTCGTTCGAAACTGTAGGACGCATTATATCTATTTCTTGATGCCGACCA AAAGAGACGAACGCTATTGTACCAATATGATCTCTATGCCCAAGAAAAAT GGTAAGATTCTTCTTCTTCTGTCTTCTTTGAAATTGTGCTAATTAAATTG ATTTGTTTTATTGATGTATCTATGTCTTTGAATTTGAGGGGGATCGTTGT CCAGATTTCTAAAGTGATGCAACCTTAATAATTGCGCCGTCAGTAAATAC ACACgaataaaacaattttgaaaatgctACATCGTGAAATCTAGACTTTA AATCAGAGGAGATTGAAGCTTTTGATTAATAGAGGTGCTGTTTAATGCAC GCAAAATAATGTGAATTTGTCGAACAGTCTGTCTGAAGTGGTTTAGGCCA CCATTTTTTATCAACAATCGTTACAAAAGTTATGCCAAACCGTTGCTTTT GTTTATTGATGTCCACAAAATATTTTCTCGctatattttgatttcaaaca tAAGCACGTCCTGTCATTCTATAATGCAAGAATGATCAATGTGCGAGATA GTCAACGGAAGTATCTGTCATTATTTTAAACCATTAACTTTTAACGAGTG CAGCCTTTTAGTTTGTGCTTCCGGTAAATTACCATGTCTCTAGGGCTGAT AGATCACttattctgaaataaaaaacataatTCGATTAGCTTAGGTTGAC ACAGAACTTCGTCTAAAAGTCCTGTTAGTTATGGTACATTTTCTAGTTTA AGACCTTAAAATTTCACATTGTCACTATTTCGGTATTCTTCAGAGAGTTT TGACTTATTCAAGCAGTTTGtcgtttttcaaacaaaaacagttCTAAAGC CTTAGCAacattagcatgtttttaaatCGCTTACCTCGAAGCCTTATATG TTATGTATGTTGTTATATACTTCATTCTTATAATAAGAACATGTAAATTG ACAGGAATGAATAGCTAGCACTacactttttttcataagaacaattttat aagtacaatttaagaacagtggagaggctgaagttagagagttatagcaa aaagaatcactggtttctaaaatcctctaaataataaagtaaatagccaa aacttgttttttaccttagaaaaaataagaacaattcaaggctcaaagtg ccaaaaaaataagaacagccaagcctcagcaaaaatttactggttcttat aaaaaaaagtgtagtatAGCACGTCTGTTTGCTTTAGTATTGTACTAGTA TTAAACCGCACGTCTAATATCTAGGAAATTATATCTCATACTTTTGTCTG GAAACTTCTTATTAAAGCTCTACTTAAACTATTAAGTAACTATCCAAAAA CCCTCTTTCTTTTAAGTCATAATGTATTGACCGCacttaacacatttata atatGTACCTAAAAAGACTTGTGACTGGTGATAgtattttgacaaaaagt tgGTCAGCTTTGAAAAAAACACtctattttctcttttcttaaTCTCCTAA TTGGCAGATCTCTCTTGATCCTctttcaaagctttttgaaaatgagCTAT CTCCCGTCATTGCGCAACTTTCCGAATTTCGTTAGTCATCATTTAATTGT ATGGTATTAAAGTATAAAGCTCGTTTAACCTTTACTTATTCGTGATTAGG TTTTGAGCACTAGTCTGTTGTCAGATTAAATACTGTAATGCAATTCGTAT TTATAACTGATTATTGTTTTCCCACAGACTCTTGGATATCATTCTATCTT TCAAGTTGAAGCTATGTACTCAAACCTAATCAAACTTTGTCATTTATTGA ACGTCCTCGCAATTTTTGCATAATGTTTACTCGAACTCATTATtactcga aaaattatttttgaaagctCCAAAAGTGACTTGTTCCAGTTAGTAGCTTT GAGTAGTTTGGTTGTTTGAGGGGGTGGTCTATGGACAGTATAAAATGTAT ATCGGGACTTTTCTTAAATACGGTCTGATCTGGTCTAATGTCGAGCTATT ACCAGATACAGAGTTTGCTGAAAAAACTCTTACTAGCAtaatatatttta ctttttcatcaaACCATCACCCAATCCCAATCCTTTGTATTTTGCATTTT CATCAAACCATCACTCAATCCCAATCCTttgcattttacattttcatcaa aCCATCACTCAATCCCAATCCTTTGTATTTTACATTTCCATCAAACCATC ACTCAATCCCAATCCTGATTACTTTTCTAGTTGCTTGAACCATCACTCAA TCCCAATCCTGATTACTTTTCTAGTTGCTTGAACCATCACTCAATCCCAA TCCTGATTACTTTTCTAGTTGCTTGAACCATCACTCAATCCCAATCCTGA TTACTTTTCTAGTTGCTTGAACCATCACTCAATCCCAATCCTGATTACTT TTCTAGTTGCTTGAACCATCACTCAATCCCAATCCTGATTACTTTTCTAG TTGCTTGAACCATCACTCAATCCCAATCCTGATTACTTTTCTAGTTGCTT GAACCATCACTCAATCCCAATCCTGATTACTTTTCTAGTTGCTTGAACCA TCACTCAATCCCAATCCTGATTACTTTTCTAGTTGCTTGAACCATCACTC AATCCCAATCCTGATTACTTTTCTAGTTGCTTGAACCATCACTCAATCCC AATCCTGATTACTTTTCTAGTTGCTTGAACCATCACTCAATCCCAATCCT GATTACTTTTCTAGTTGCTTGAACCATCACTCAATCCCAATCCTGATTAC TTTTCTAGTTGCTTGAACCATCACTCAATCCCAATCCTGATTACTTTTCT AGTTGCTTGAACCATCACTCAATCCCAATCCTGATTACTTTTCTAGTTGC TTGAACCATCACTCAATCCCAATCCTGATTACTTTTCTAGTTGCTTGAAC CATCACTCAATCCCAATCCTGATTACTTTTCTAGTTGCTTGAACCATCAC TCAATCCCAATCCTGATTACTTTTCTAGTTGCTTGAACCATCACTCAATC CCAATCCTGATTACTTTTCTAGTTGCTTGAACCATCACTCAATCCCAATC CTGATTACTTTTCTAGTTGCTTGAACCATCACTCAATCCCAATCCTGATT ACTTTTCTAGTTGCTTGAACCATCACTCAATCCCAATCCTGATTACTTTT CTAGTTGCTTGAACCATCACTCAATCCCAATCCTGATTACTTTTCTAGTT GCTTGAACCATCACTCAATCCCAATCCTGATTACTTTTCTAGTTGCTTGA ACCATCACTCAATCCCAATCCTGATTACTTTTCTAGTTGCTTGAACCATC ACTCAATCCCAATCCTGATTACTTTTCTAGTTGCTTGAACCATCACTCAA TCCCAATCCTGATTACTTTTCTAGTTGCTTGAACCATCACTCAATCCCAA TCCTGATTACTTTTCTAGTTGCTTGAACCATCACTCAATCCCAATCCTGA TTACTTTTCTAGTTGCTTGAACCATCACTCAATCCCAATCCTGATTACTT TTCTAGTTGCTTGAACCATCACTCAATCCCAATCCTGATTACTTTTCTAG TTGCTTGAACCATCACTCAATCCCAATCCTGATTACTTTTCTAGTTGCTT GAACCATCACTCAATCCCAATCCTGATTACTTTTCTAGTTGCTTGAACCA TCACTCAATCCCAATCCTGATTACTTTTCTAGTTGCTTGAACCATCACTC AATCCCAATCCTGATTACTTTTCTAGTTGCTTGAACCATCACTCAATCCC AATCCTGATTACTTTTCTAGTTGCTTGAACCATCACTCAATCCCAATCCT GATTACTTTTCTAGTTGCTTGAACCATCACTCAATCCCAATCCTGATTAC TTTTCTAGTTGCTTGAACCATCACTCAATCCCAATCCTGATTACTTTTCT AGTTGCTTGAACCATCACTCAATCCCAATCCtttgtattttacattttca tcaaaCCATCACTCAATCCCAATCCTTTGTATTTTACACTTTCATCAAAC CATCACTCAATCccaatcctttgtatttacttgttatctatttcTTCAAC AGATCCACCTCCATCACCTAAAAACGTATCAGAAATCACAGAATGTCTTC AATACAAAGAAATGCCAAACGGCCCCAACAGCAAACGTGTGTGGGATCAA ATGGAAGACGTCTCTTGCGACAACGATCTTCAAGGATGGTATCGATTCAA CCAGCCCGAAGGCTATGAAATGGCTAGCCAATGTTTAGAAAACCAAGAAA TTACTGACAAGTCACGGTTCGGTCAGCCCTGCGGTGCTAACTTCCGTGGC TGGATGGTTGACCGACATCCAACGGTTGAGGAAGGACGTGTCCAaagaaa gatttgtttttcGTACGATAAACGATGTTACTGTGAATTCTATACCAATA TTGCTGTAAGGAACTGTGGTACCTTCTATGTTTATCGGTTGGGCTCTGTT CCAACGTGTAACGCGAAATTTTGTGGAGCACCGGCCGGTAAAAGAGCTAA AGGTAATCTTCTACACTAAACATTAAAACTATGTGAATAACTTCTTGACT TGGCCAGAAGAAACCTTTTTTAATTTGAGCTGGGtagtttttttgtaatc ttcaagAACCATTAATCAACCTTATCGTATGTTTTGATTTCTATAATTTT CACCACCTATTATTTTCTACttccttaaaatattctttgcGCCGGGATCT TTTTACAACAACgcctttcttttcattttattgtAGATTTAGACTACACG AAAAACAAAATAGCGGCAGGACCATACGATATGTGTAAGAATTACGAAGT ACAGTACGATCCTGACCGTCTGTGGACCTACACAAGCCCTACTGTCATGA AATGTGATTCTGAGTTGTATGGGAAATATCGTTTCGGTTCTAAATACACT CCTTGGCAAATGAAGGAAGGATGTAACACAACCGAAAGTAATAGCCAGAT TCACAGATGCGGATCCAAATACCATGGTTTCATGTTGGGCGAACATCCTG TACCAGATGAAGGTTACGTGGAACGtgttatttgttttgaaagcgCAGAC AACCCGTGTGAATGTAAACATTCGGCGACCGTGGGTGTACAGAATTGTGG TGGATTCTTTGTGTATTATTTCAAAGGCGTTCCGTCATGCTCATCCCGAT ATTGCATGCTGGCCAATAATTCTATGCGTAagtttttaagtatttttttt tgtaatacgGCCTTCCTTTCTTCTGTACTGCGATCATGGTCAGAATATGT TGGCATTTCTGGGTATTCTAATACTATAGCGTCTTGCTGAATTCAAAGTT CGGTCGagaatggcattttctggcttTCTTCTTTATCTAATTGGagattt caatttgggaggagTATAtcgacttacaggctatatattcatgatatgca ccattgcaatgtcttccgttccacccaatagctgattggttgaaagtgac gtattgactgcttttacgtcacttccaacccatgagctattgggtccatg acgtaatgtcagaagacattgcagtggtgcatatcatataTTCTCATCCT ACTCAGACCATTAAcaagcttttggatcctcagatcttcAGAACTTAGAC TTAAAACtcactctactttccaaccctAAGTTAAGGCACTTGCAGGGAAA AAATGCTTTTGTGTCAAATATTACGGCCATAGTTGTAGGTGTTATTTGTA GATGTTTCGCGTTTGTCTTTTATAATTGACTTACGCTAATATATACGGAC CTacctagcgagcacctcactaaaatccgggatttttcatctcgtttctt agtgagttccactttgacgattttcgaaaaaaagaagcctttcaagtgtt aattgcgtaaaaaaacgcgggtgacgtctagtataggctaggaCCTACCC AGCTAGCACTCAATGTTCTTTTAACGTTCAAGTGACGTTAATTGGACCTT ATGaacgtcaaatggacgttgttttgacgttttgtGCTGGCTCggttgtt cgaattacagagagatgaAAATTCTTTTGAGGATTTGTCAGGTTGATTAA AACCCTTGTAGCATCCACCAGCATCCTCTCTGAGATATATTTAAAGACAT ACCTGCTCTAACACTTGATCTGGTCTGTTTTTAATGCGTGATGGTaaatt ctcattttttatctttttatcatGTAGAGATCCGATTGAACCCAGGTCTT CCACCGATGTATGAAATTCCATCGCCTAACGAAAAACCAACTGCTGCTCC TGTTCTTGATGATGATGGTAAGTGATGAACCCGCCCTCTCTTTCAATCTA ATGCTTGTTTCCGAAGAGGCTCTTGATGAATACATAATCACAGCCACACT GTATACTTCCACCTCAATGAGTTAATTACTGATAGTAATTAgtcattttt atcaatttctttGGGTAAAAAGTCCtaattttactacttttaaaTTCTTT CTTTTATCGATTATCCAACAACGACCAGTTTCGTAGGGGCATCAAAATAT GCAATTCTTTACCTTGTCAAGTTTGGCAGCCCTGACCTTGCCTAGAACGG GGTTAGAAATGGGGTCTTAAAAACAACTCGGCCATTTTtccaaagttgga aaatgtAGTACTTGTTTGTTTAAAGGGAGGTTAAGCAAGAATCTATTTAT GACGTACGGGATCTTCTTTTGTCCTATaaattcttttacttttttgtatA CGTCATAACTTCCAAAGATgagattcaaaaaatttcttccggTATATTTA CAAATGTTTAGTTGTTTACAGCTCAAATTCaccaaattttttgtttaact gtttgtttaacttttttatCGGGTGATTTTTTATCCTAAATGAATCAGCC CAATCTCTGTAAGGTAAACTTCCCTTAGATCGTGCTTAGATCTTAATAGA TTTCTATGACGTGATACTGGAGAATTTCGCGGTCTAGATTCACTCCTCAA ACTACAACGTTAATCTGCGTTAATGTCAAATTTTACGGGACAGAGCTAGC CTTGAAGAGATTCGAAAACCTCACGTCATAGATTTCGTACGTCGTAGATA GCTTCTTCGCTTATTTGTTgctaatttttcgatttctccTTCAGATGATG GAAACGGTGGATTGATAGCAGCAACAGCAGCTTTGTCTATCATTATTCTC ATCATTATCATTCTACTGATTATTATCATCGTTATTTTGGTAATCAAAGT GTTACCTGGTTACCGACGCCGTAGTCGCCATGGAGACGAAACACCTAGTT ACGCATCTAGTGCGCATGACTATCCAATGCAAAGTAAATCAAAGCAACCG AAGCAAAGTCCGCCACCTTCAAACGGTGGTTTACCAAAAGAAGATCCGGA ACAGATACCACCCTATCCTTCTGTATTACCGCCTGGTAGAGAAGACGCTG ATGAGATGGACTCTCCGGCATCTTCACAGGCACGCCCGGGTGCTTCTAAT AGTGATTTGAAAGATATTCCGGATGATTTGCAACTAACGGACGATGATGA TGAGGATGAAAACGCTGATGATTGTGATACGCTTATGAAGAAAGAAGATT TCAATAGGCCTCAATCTTACGATCAATTACCATCTAAAGATTCTGCTGTC TAACATACAAAGAGAAAAGGGGAAGGATAGATAGAACTCCTTTCCGTGAA GGGATGTTTGAAAGTACCCTTTCTTCTTGGAcgttgtttttagatttttt ttataaaagagaaGAGACACCATGGTCAATAATATTGTACATATGTaggt tatgttttttttttcaaacaaaatgaaaagttttttaaatattgttaTGG CAAGGCTGGTTTGTTCACTTTTAACCAGTACCCGTTGTTTTGTATACGAT TTCCATTTCCATACTAAGATTCTTGTGCCACTTTCCTAGTGGAAACACCA GGACTTCGGatagttgaaaaataagcttcggaaaattagacaatttcgTG AGTAATCACAAGATTTTCCGATCTCATGCCGGTTATCCCGAAAAAAACTG GAAGATTTacggaaaagtgacaagaatcttagtgcggaaatgggaatcaa aaTACAAAACGATAGTAATCTTACCACCAAACGGCTGTTTCCCATCAGCG CCAGGATATTACCATGAGTTTTATTGGATGGATTGATGGATGTGATTCAC TGTTTCAGGACACTTACATGGAcgattattttgttttattgaagaatttt cacttcacttttattttaaattctaaattctaaattttagtgattctaat tcttcattttttacccctaaagtaaaatttatgtgtttttcattttggat tttaagttcaatttcaaaagattttttttgtacCATAGAATATGTTTTAT GTAGAAAAATAACcttattttgcttttttcacttattttttCTGGTTTTT AACCAATCTTATGTAAAATTATTGTTCTagtattttcaaatatattttca aatatttttctacaatttccatttttttaaagatgatTATTCTTCAAAAG ATATTATTCTTGTATCCCCATTTGTACC
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00070361TCONS_00070361Clytia hemisphaericatranscript
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_55supercontigscaffold_55:123085..132862 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
7.44 7.16 6.28 5.47 93.32 73.5 80.75 83.74 45.15 53.05 40.13 34.12 41.4 38.36 55.61 54.36 86.85 77.82 38.68 37.5 58.62 65.97 55.07 55.63 54.74 59.27 39.46 35.84 30.45 28.6