XLOC_044515 (gene) - C. hemisphaerica

Overview
NameXLOC_044515
Unique NameXLOC_044515
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_63:209469..218094+

Legend: transcript
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_044515 ID=XLOC_044515|Name=XLOC_044515|organism=Clytia hemisphaerica|type=gene|length=8626bp|location=Sequence derived from alignment at scaffold_63:209469..218094+ (Clytia hemisphaerica)
CAAAATACAAGATGGCGGACGACTGACTGAGATTTTGCAAGAaaattttg
taagaaaaatGTATCTTTACTCATAATCTAGTGTAGATTGAACGcgtaag
agccagttttttgtAATCGATACGTAATCGACAGGAACGTAACTTTTATC
atcgattagttatcgattaccGTCAATTATCATCGATTGACCATCGATTG
ATCAATCAGTTCCATCAAtaatgccaaaaacattttgttccaCCACTTTC
ACTTAAAGATAGGCCGCCATAGAATGAACTTTCTTTTATAGGATGAaaca
tattcatgtggctttcagccttgcactccatcgcagaggctatttgagat
attttactaaaactagcccagagaaaaatttttaacctttttattatttg
aatgcatgcctttttaatactcaattcagctcaaatataaaaagattaaa
aaattttaacttggtcattttagtcaaaaaagtcattaaaattgattagt
ctctgtgatggagtgcaaggcaaagccacatgaatatatggttcatccta
taaaagaaagttcattctatggtggcctatcttgaagtgaaggtggttga
acaaaatgtttttggcatattgttGGAACTGTCAATCCATACTAATCGAT
GGTTAATCGATGATGATCGATGGAACGTAACTTTTCGCGTCGATATTAAT
CGTCAATAGTATCGATTACGCATCAATTATTATCGCTTATTATCGATTAT
CATCAATTACCATCGATTATTTTTCCGCATCGATTTCATCGATTGACTAC
GCCtgggattgttcatcgcatatacaatttccagacggtgtcaatcgaac
gaatcgaacgccgaatccattgaacgcaattgaacgcaatcgaataattg
caattcgattgtcgaacgcaatcgaatcgcaatcgaatattacctaggat
ttgctgttcgattgcttcgattacgttcgattgtattcgattacgttcga
ttgtattcgattacgttcgatcgATTTAATTACATTAGaatttattcgct
ttggtaCGGTACTTAAGCACTCGGCCGCCTGCTAAAAAGCCCTaacggag
tgatccaatttaatttaatcaaactcatcaaacataaaCCTAATCGCacg
aaatcgaagattattCAACAATCGAATATAgttcaactatcaatcgaacc
aatctaacagttacatcaaaatgcctcgaaaatgttgatatgaaaattgc
gtaatcagagaacgtatgtctcgcttattataaaaaggccgagacaaact
ttcaataattggattgtaacatcgagttaagtctcttttgttaagtcacc
agggggtaaataaaacagacctttNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNacgcaatcgaatattaccc
aggaatcggccgttcgattgagattcgattacgttcgacaatcgaatcgc
aattattcgatcgcgttcgattacgttcgattggtgcgattgcgattttt
gttcgaagttgttcgattgacaccgtctggcaatttctacgggaaatcga
aagtaatttcattcagcttgtgatgtttgacagtttgagagcttggatgt
tgggaagctgcaagaataaagccagacgatctcaatcgaacagaatcgac
gatcgaaccagtcgaacaacaatcgaaccaatcgaaNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNa
ttgagattcaattgcgttcgacaatcgaatttcaatcggtcgattgcgtt
tgatttggtttaattggttcgatcgtcgattcccttcgattgagatcgtc
tggatataATAAATAAGAACGACTTTGAGCTAGGCCTAATatttaaaaga
aaggaaaaggtCTCCAACTCCTGATAAATTGTTGCACTATCTATGATTGG
ATGATATAAGatgctttaaaaaaatcaagaactaAGACAAGTACCGttta
agttggtctaatatagacatcccttgtctaattccgacacccttctttag
agaaaggaattaTATGAAAGCTTgattgaatcactgattgaaaaaggatt
attcctctctgaccaataagcaaagaaaaacagtttcaacctttctataa
atttcagccgATAAAAAGGCTGTCGGAATTTATAGAGGAGGGGTTtcgac
caagttacggtatcaATGGGTAGttcattttgggcaaaaatttcatCCTG
AAACCGTGAGTGGCTATGAGTGGTCTTAAATCAtccaacagccctgccta
atttccaaccccccaaataactgttatgagaaaaattctatgtttacaaa
cattccctctccaagttgaacgataaactaattgcaagaactctcaaaac
aaaacatccaaCAAGacaactttgatgtcaagatgtcaattataatgtga
taaaaaaagcaGGCCATTTTCTAGAAAGACAAGGAAGCGTGAGCTTGGAA
CCAAAAATGGAACTTTTTCTGGTGATTTTCTAACAAAAAGGCAATTTTTG
CTGCTAATTTCAACatatttgtaactttttgttgGGGCAGCGTCCGATAA
TCGGACCCTTAAAAGGCATAAAAAAAAATGGCCTGAAAAGTGCGAGCTGT
TAAAATAATTAtgaattttattctaaaaatattcGTTGTTCGTTTATCTT
GCTTAAAACGTTAACAAATGTTTTGGGTGAATTGCAGAAAAATAGTACTA
TGTCCCGTCCGCATCAGGCACTTTTTGAGGACCCATAGCTCAACTTTGGC
AAATGCAATTTCTAAGAACTTCACATTTTTGTGAACTTTACTAAATAGCC
TTCCTTGGATTGTTATATAATTACAGCCtcaatcttgagaaaaatgtTGC
GGACAGGAGACTTTGTTGCGGACaggacaaaaagtttttcactCATAGCT
AGTACATgtaaagtcaagaaaaatgataCTGCTGCAAAAAGCATGTGGTT
CCCTACAGTTCATTGGCTTGATACAGTTATAACATTAAAGTTGtctcaaa
aaaagagaaattaagACTTTTGTGCCGTTGCGGACGGGACAAATTTCTGG
ACCGTATTggtttttaccagttttaacaaAAGGCAATAAATGTCTTTAAC
GCAAGAAACCATATTAATATGTCACATCAAAACGGAAATCGGGGTCCTCT
AGTTCCCAGATCTTGACTTGTAAGCACAAATGGAGCTTTTGTTGTGGATG
GGACATTGTACTATTTTTCTGCAATTCACCCTTTTAATTTAATgggttca
atgtatcaaatctctcagtttaatTGACACTTCTGGTATCTTTATTAGAT
ATTACATCACAGCGAAaggtcttttttattttattttgtatctTCCCCAt
tggaattaggcagggctgtcaggtacctgatcaacacaaacCAAAAGTCA
AACCAAACCTTTAGTCTTGCGTTtgctctttccttcccaacaactttctc
ttttgcttatgtaggttttaaaattcAGTAATGAACTTCtttagctttat
ctgaataaatctggttgaaaaccttctgttAGGTTTCATTTGGTAAAATT
TTTATCCACATGGTTTGAACCAGTTTCCCCAatttcttgataattaaaaa
ttggaactttcccatGGGTGCGATTGGGTGTAACAgcattgcaaaatatt
tttgtgaaaatttatcTTATTCTAATGGTATAAATTAATCTAgaaaggaa
acaaatattaaatttgactcTCATTTGCTCGTATTTATAAATTTCACAAT
AAAAAGAAccttttacaaattattttctttagcGGGCGTTGAATCGATAT
TGACATATTTAAACATGTCCAATGCTGTGCATCTTATGCCTGCATATTGT
CAGCATCGTGCatattgaagatattttcagttataatccaaggtagaata
AACTTAaaatagaaagggggtattttttagtacTCCATACAATGatgggt
gttttttttttaattctatgtttaaatttttctaccCAGCTTGGTTGCTA
TGTACACGTCCTGACTGATCCAAAGGGCTTTTTTTGTGTGTAAGAAACAT
TCTGCTCGGCGGGTACAACACCAGGTGACAGCTAGTAGATATCTAAAGCC
CTATCACTATCCCAGGCTAAGAAAACTTAAATTTATTGCCTGGGAGAACA
ACTTAGATAAACACCCTTTTTTGTTTATTATCTTTGAATTGAAGTGGGCA
AAGACAACTGCTCAGCTCAATGATGTAGAAAGGTTTTTTAAAGGTATCTT
CAGTTGTAATCCAAGGTAGTAACAAACAGAACATGGAATAGGGGCATTTT
TgatcagtttttttttaattcaatgtcTAGATTTTTCTACCAAGCCCCAT
TGCTATGTGCCCATGTCCTGTTGTTAaaacttttgattgaaattgaaaac
aaaactaaattaAATAGCTCAAGACTGCGTGCAGGTATTATCGAAAAAGT
GAAAGGAAACTTTGATTGAATTAAgttgttctttttcaaaatgtccaatG
TCATTGTAGTGaagaattttggaaattattcccaaaacacaaaaaatgag
AGCGAAATTTAAATTTGACCTGGGACTGTAAGTTTTattaatattttcag
gaaagtATAAATTCAGGGCACAATGCTATTATCTGAACAATTGTGTTCCT
CCCTGAATTAGAAATGCTTACTTTAGGAAAGCAAGTCACGCAGCAATGCA
CGCAAAAAAATGTTGTCATCATATCAGTTGGTTGCTAAAATTagtatgtt
atttttttcaatttcaagctaacTAATGAGTCAAAATTTCTGACCTAAAC
CTATCAATNTAAACATGTCCAATGCTGTGCATCTTATGCCTGCATATTGT
CAGCATCGTGCatattgaagatattttcagttataatccaaggtagaata
AACTTAaaatagaaagggggtattttttagtacTCCATACAATGatgggt
gttttttttttaattctatgtttaaatttttctaccCAGCTTGGTTGCTA
TGTACACGTCCTGACTGATCCAAAGGGCTTTTTTTGTGTGTAAGAAACAT
TCTGCTCGGCGGGTACAACACCAGGTGACAGCTAGTAGATATCTAAAGCC
CTATCACTATCCCAGGCTAAGAAAACTTAAATTTATTGCCTGGGAGAACA
ACTTAGATAAACACCCTTTTTTGTTTATTATCTTTGAATTGAAGTGGGCA
AAGACAACTGCTCAGCTCAATGATGTAGAAAGGTTTTTTAAAGGTATCTT
CAGTGGTAATCCAAGGTAGTAACAAACAGAAAATGGAATAGGGGCATTTT
TGAtcagttttttttgaattcaatGTCTAGATTTTTCTACCAAGCCCCAT
TGCTATGTGCCCATGTCCTGTTGTTAaaacttttgattgaaattgaaaac
aaaactaaattaAATAGCTCAAGACTGCGGGCAGGTATTATCGAAAAAGT
GAAAGGAAACTTTGACTGAATTAAgttgttctttttcaaaatgtccaatG
TCATTGTACTGTAGTGaagaattttggaaattattcccaaaacacaaaaa
aatgagAGCGAAATTTAAATTTGACCTGGGACTGTAAGTTTTattaatat
tttcaggaaagtATAAATTCAGGGCACAATGCTATTATCTGAACAATTGT
GTTCCTCCCTGAATTAGAAATGCTTACTTTAGGAAAGCAAGTCACGCAGC
AATGCACGCAAAAAAATGTTGTCATCATATCAGTTGGTTGCTAAAATTag
tatgttatttttttcaatttcaagctaacTAATGAGTCAAAATTTCTGAC
CTAAACCTATCAATAACTTATAAAATAATGCTTTTTTCAGCTTATTATCA
TAAGAGAAATGGCTAAaggaaaagaagcaaaaaagaaaaagttaaagaag
AAAGATATCAGCTTGCCGAATAATTTTAAACATAATTACCACATGACATA
TGATAATCGAGAGGGTAATTACATTGGTGTACCTCCACAATGGAAAAAAT
TCCTTGCTAAAGAATTTGAAAGACCAAAACCTTTCATTGATCCAAGTGTT
GTTACTGAAATACAACCAGGAGCTTTAGTTTTGCAAGCTCAAACAGTCAG
CCCTGGCATGAGACAATCTGCCAGTACAGGAAAAATAAATATCGCCAGAT
CCAATTCTCTACGACAAAACTCGGTAAAGTCCAGAGCTAAAAACAATAAG
GTTGTTGAAGAATCTTCAGAAAACAATGCCCCAAATATGGCTTTGGATAG
AAATAAAGCGGCTACAAGAAGTTTACCAAAGAATGTTTATTCAGCTCAAC
GTAAGGAATATTATGAGGCCAGACGTCAACAACAACAGGGACAAAATAAT
GAACCTTCTGATAACATGGATACCAGTGATGGTCCACCGCAATCATCAAC
AGCAATGAGcgataatatttttgtttccccTGACGAATTCAGGGAAGCAT
TAAAATTGGTAGTCAATCAAGACGATCCgaaagagatttttgaaaatttt
gttaagATTGGTGAAGGTTCAACTGGTGTTGTTTGCATTGCTAAAGATAA
ACGTTCTGGTAAACATGTTGCCATTAAAAAGATGGATCTTCACAAACAAC
AAAGGCGAGAATTGCTTTTCAATGAGGTatttatttcttgacatttCCGT
TATTTACAGTTTCTGATGTTGGTTGTTTTTcttagaaaatattaaaaata
catttcaaaatttcaagttaaaaGTAGTACATTACTTCAAGTTCCATGTT
ATTGCAATAATCATACGCAAAAATAAACTAAAGTTCCATTTAGTTGGAGT
TATTACTCAAAGGTGTAactcttaaaattaaaaatcttaaaatcttaTTT
TACAGGTTGTGACGATGAAAAACTATCACCATACAAATATTATTGAACTT
TACGATGCTTACCTTGTCAATGAAGAGTTGTGGGTTGTAATGGAATATCT
GGATGGTGGTGCATTGACTGACTTAGTGACCAACACTCAGTATGAACTGT
TCTTATATCTTAATAAATTTCATTTGGTTTGTCAATACAATATTAAGCAA
TGATAATATGATGCTTTACGTTCAAAGTCCTTCCGttttaaactgatttt
tgcCTCAGCGAAGTATAATATAACGAAACTTTTCATTCTCAGATTCAGCA
AAAATCTGTTTCagtctaaatgaaaaaaaaattgctttgactttgaattc
agaaaatttgaatatcttaaaaattatatatttccCAATTATATTAAATA
CAACTATTTAAGTacaatttttttacaattaaaTCTCTATCTGAAATTTT
TAGGTTGAAAGAAGAACACATTGcatatttttgtaaatgttGCTTGAAAG
CTTTGGAGTATCTTCATTCACAAGGTGTTATCCACAGAGATATCAAGAGT
GACAGTATTTTACTATCCAGAACAGGACAGGTAGgtaaaaaaacatcttt
ctcgAATTATGCCCCCAAATGAAGCCAAACATTAGAGTTATGGCCATTAT
CTTTATTGTATACAATATTACCTTCTGCCTTTTCGGGTAGAATCGCTCAA
ATTAGTAAggtcagcattttttaatttacaCTCCTCTCGAGGAAcatgaa
aaaagtatttttggcCTCGTTTCAATGCAGTTAATGATACTCCAACtgat
tttcattcaaaatgggAAGCTTTTACAAATGATTGCAGATTATGTAAGTA
TTTTGGCAACAAAACTTTGAAGCAAGGCCcacattgatttgatttgattc
atCCCGAGAACAGTGTATTAACTCATATTTTGTCTTTTCTTATTCAGATC
AAACTATctgattttggtttttgcgCTCAAGTCAGCAATGAGATTCCTAA
ACGTCGATCCTTAGTTGGCACTCCATACTGGATGGCTCCTGAAATCATTG
CTCGTGACTCATACGGTGCTGAGGTA
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00071641TCONS_00071641Clytia hemisphaericatranscript
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_63supercontigscaffold_63:209469..218094 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
2.3	2.04	0.75	0.5	53.4	37.29	27.65	30.05	23.22	23.73	20.2	16.19	12.87	11.26	9.32	9.17	19.92	18.46	7.16	13.44	18.91	17.74	13.61	15.87	20.58	20.58	18.24	13.9	18.25	18.72