TCONS_00003588-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00003588-protein
Unique NameTCONS_00003588-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length570

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00003588-protein ID=TCONS_00003588-protein|Name=TCONS_00003588-protein|organism=Clytia hemisphaerica|type=polypeptide|length=570bp
MDEDSSKVGDDLDESMDNLTIEFGPTETVHQWCKMPECDEVVGSKRSKHT
LVAWSDLLYVFGGDNGKRMLNDLLRFDIKENTWGRVVTTGTPPAPRYHHS
AVVYANSMFVFGGYTGDIYSNSNLRNKNDLFEYRFNTGQWIEWQVNGKKP
VARSAHGAVVYKSSVWIFAGYDGNARLNDMWMVGLTDPVPFWTEVTQLGK
RPPTCCNFPVAVARDSMYVFSGQSGAKITNDLFLFNFPERKWTRIVTEHL
LKGTHPPPSRRYGHTMVAHDTHVYVFGGVADNNLPNDLFWYDLDTKTWDV
ITTTGDIPSGRLFHHADIIDNKMYIFGGTIDNNVRSGELYYFTFSSYPRC
TLQDDFGRFLESRQFTNLEFHLEDEIIEGHKSIVAARSPYLRDEIARAID
RQARGEQTNTCTTTVPEERPSDYVPPTRGRRPSESQRKLVIPLDVNRYAF
KVALWFIYTDQIFPYIKDEHGATTDIMKLMMDVYSLAVKLRLLRLRFLCQ
QYIEASISTKNVIVALECAEDLGLDLIKELCMRFIVREVHFNQIIMSTDF
ENLDKVLMIEVVRRKQLQQV
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_002002XLOC_002002Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00003588TCONS_00003588Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000210BTB/POZ_dom
IPR006652Kelch_1
IPR015915Kelch-typ_b-propeller
IPR011498Kelch_2
IPR011333SKP1/BTB/POZ
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000210BTB/POZ domainSMARTSM00225BTB_4coord: 366..507
e-value: 3.8E-5
score: 33.1
IPR000210BTB/POZ domainPROSITEPS50097BTBcoord: 366..462
score: 9.889
IPR006652Kelch repeat type 1SMARTSM00612kelc_smartcoord: 216..271
e-value: 16.0
score: 1.0
coord: 57..106
e-value: 0.13
score: 19.4
coord: 272..321
e-value: 0.97
score: 11.8
IPR006652Kelch repeat type 1PFAMPF01344Kelch_1coord: 260..301
e-value: 5.2E-11
score: 41.9
NoneNo IPR availableGENE3D3.30.710.10coord: 362..548
e-value: 1.5E-24
score: 86.0
NoneNo IPR availablePFAMPF13418Kelch_4coord: 46..93
e-value: 1.1E-9
score: 38.0
coord: 210..256
e-value: 1.3E-6
score: 28.2
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 406..433
NoneNo IPR availableCDDcd14821SPOP_C_likecoord: 507..564
e-value: 1.30585E-6
score: 45.2348
NoneNo IPR availableSUPERFAMILY117281Kelch motifcoord: 119..345
IPR015915Kelch-type beta propellerGENE3D2.120.10.80coord: 15..191
e-value: 2.0E-36
score: 125.2
coord: 192..361
e-value: 6.2E-36
score: 123.6
IPR011498Kelch repeat type 2PFAMPF07646Kelch_2coord: 95..141
e-value: 4.9E-6
score: 26.2
IPR011333SKP1/BTB/POZ domainSUPERFAMILY54695POZ domaincoord: 430..463
coord: 346..396
coord: 507..536

Blast
[Close]
BLAST of TCONS_00003588-protein vs. Swiss-Prot (Human)
Match: LZTR1 (Leucine-zipper-like transcriptional regulator 1 OS=Homo sapiens GN=LZTR1 PE=1 SV=2)

HSP 1 Score: 652.129 bits (1681), Expect = 0.000e+0
Identity = 329/625 (52.64%), Postives = 416/625 (66.56%), Query Frame = 0 
Query:    6 SKVGDDLD------ESMDNLTIEFGPTETVHQWCKMPECDEVVGSKRSKHTLVAWSDLLYVFGGDNGKRMLNDLLRFDIKENTWGRVVTTGTPPAPRYHHSAVVYANSMFVFGGYTGDIYSNSNLRNKNDLFEYRFNTGQWIEWQVNGKKPVARSAHGAVVYKSSVWIFAGYDGNARLNDMWMVGLTD-PVPFWTEVTQLGKRPPTCCNFPVAVARDSMYVFSGQSGAKITNDLFLFNFPERKWTRIVTEHLLKGTHPPPSRRYGHTMVAHDTHVYVFGGVADNNLPNDLFWYDLDTKTWDVITTTGD-----------------IPS-------------------------------------GRLFHHADIIDNKMYIFGGTIDNNVRSGELYYFTFSSYPRCTLQDDFGRFLESRQFTNLEFHL--EDEIIEGHKSIVAARSPYLRDEIARAIDRQARGEQTNTCTTTVPEERPSDYVPPTRGRRPSESQRKLVIPLDVNRYAFKVALWFIYTDQI-FPYIKDEHGATTDIMKLMMDVYSLAVKLRLLRLRFLCQQYIEASISTKNVIVALECAEDLGLDLIKELCMRFIVREVHFNQIIMSTDFENLDKVLMIEVVRRKQ 566
            SKV   +D      +S++ LT+ FGP ETVH+W ++P CDE VG++RSKHT+VA+ D +YVFGGDNGK MLNDLLRFD+K+ +W R  TTGTPPAPRYHHSAVVY +SMFVFGGYTGDIYSNSNL+NKNDLFEY+F TGQW EW++ G+ PVARSAHGA VY   +WIFAGYDGNARLNDMW +GL D  +  W EV Q G+ PP+CCNFPVAV RD M+VFSGQSGAKITN+LF F F ++ WTRI TEHLL+G+ PPP RRYGHTMVA D H+YVFGG ADN LPN+L  YD+D +TW+V+  + D                 +P+                                     GRLFH A +I + MYIFGGT+DNN+RSGE+Y F FS YP+CTL +D+GR  ESRQF ++EF L  ++E ++GH +IV ARS +LR +I +A +R A+  +       VP E P        G RP       V   +     F+V + F+YTD+I +P      G   D++ L+MDVY LA+  +L RL  LC+QYIEAS+  +NV+V  E A  L L  +KE C+ F+V+E HFNQ+IM  +FE L   L++E+VRRKQ
Sbjct:   22 SKVAPSVDFDHSCSDSVEYLTLNFGPFETVHRWRRLPPCDEFVGARRSKHTVVAYKDAIYVFGGDNGKTMLNDLLRFDVKDCSWCRAFTTGTPPAPRYHHSAVVYGSSMFVFGGYTGDIYSNSNLKNKNDLFEYKFATGQWTEWKIEGRLPVARSAHGATVYSDKLWIFAGYDGNARLNDMWTIGLQDRELTCWEEVAQSGEIPPSCCNFPVAVCRDKMFVFSGQSGAKITNNLFQFEFKDKTWTRIPTEHLLRGSPPPPQRRYGHTMVAFDRHLYVFGGAADNTLPNELHCYDVDFQTWEVVQPSSDSEVGGAEVPERACASEEVPTLTYEERVGFKKSRDVFGLDFGTTSAKQPTQPASELPSGRLFHAAAVISDAMYIFGGTVDNNIRSGEMYRFQFSCYPKCTLHEDYGRLWESRQFCDVEFVLGEKEECVQGHVAIVTARSRWLRRKITQARERLAQKLEQE--AAPVPREAPG---VAAGGARPPLLH---VAIREAEARPFEVLMQFLYTDKIKYP----RKGHVEDVL-LIMDVYKLALSFQLCRLEQLCRQYIEASVDLQNVLVVCESAARLQLSQLKEHCLNFVVKESHFNQVIMMKEFERLSSPLIVEIVRRKQ 633
The following BLAST results are available for this feature:
BLAST of TCONS_00003588-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
LZTR10.000e+052.64Leucine-zipper-like transcriptional regulator 1 OS... [more]
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