TCONS_00004272-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00004272-protein
Unique NameTCONS_00004272-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length945

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00004272-protein ID=TCONS_00004272-protein|Name=TCONS_00004272-protein|organism=Clytia hemisphaerica|type=polypeptide|length=945bp
VSEKVATNIKMIVLAVIISQLIAGVFASTNLHVSGGASAHDQPSCGAINA
PCVSVQYALDKSINGDTILLDINYEFVFKQNLQINKNVLITSYTSATNLP
TNQYATIIFLNPQFSSDGLINLACNFTAMNINFTVRCTNKVPSPVALFGI
NRLYGTIRINNCLIHLNLDFWNYLSIYQIYGLEGFNWKFNFENTKFTAAH
SIYTITSKMSGRSRRQSSDTNNVDELTFYNCSFNSIEIQEAFNVLSLNKS
QAFDSYLSFNCGTEKGVVDCTFIRSDLEVYADNLYVTNCTFDGSYKSSAV
YTSTSAQLSYMGKNLTIWNCSFMRATQGAVNTWKIAGLVTVLNTTFKDNK
LNHFGSIENTLRSAALTINSCDYKIINCTFQNNVDMFIRAESNDLYISLL
DESSCSGVLSSYQLVANTTIYGDANYVNSQSRIAVWDSMHSTNFMIHCPP
NHVTTYTTLFENLQIFTCYRCDGTSYNALSLAEISFKNTWSDGIVEKSTC
YSPCPYQASCVGKIVSRGNYWGVTNLTGFVTFFPCPSAYCCSSLPYCNSY
DTCAHNRAGRLCGACVKENVVSAIGENRCVNKEHCSGTLFWIGYTLSSIL
IYLFAVYYKEVFIFIKTKLDKQRARKTSRALVSVIEDEDSHPYQVLPAGP
ADENDQPVTANNVDEKGFIKIAFFFYQTASVIRISASAKITYKMPAIMDI
LTSFFNLKLDVQSSDTFDTCPLNTDNVIAINLLKTSVLFTSFGIVLVFIL
ILSVSKKFSCCKRRESSPEKQEVTLLVKLKGAFIQLLLLGYASIATICLQ
AINCIEITGQLYLYVQATIPCYQSWQKVFFMVIGVWVVPFPFVIYIGCRL
FQANQIDTNRLLSIFIFPPLVFWYLLKHLIDRISTSTPESELVQGERNYI
LSILNGPFRYRDDQFRIIWEPVLIIRRFLLIVCCTFIISPTEKLY
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_002373XLOC_002373Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00004272TCONS_00004272Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR012334Pectin_lyas_fold
IPR011050Pectin_lyase_fold/virulence
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR012334Pectin lyase foldGENE3D2.160.20.10coord: 16..532
e-value: 1.1E-6
score: 27.4
IPR011050Pectin lyase fold/virulence factorSUPERFAMILY51126Pectin lyase-likecoord: 263..522
IPR011050Pectin lyase fold/virulence factorSUPERFAMILY51126Pectin lyase-likecoord: 18..240

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00004272-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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