TCONS_00004804-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00004804-protein
Unique NameTCONS_00004804-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1686

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00004804-protein ID=TCONS_00004804-protein|Name=TCONS_00004804-protein|organism=Clytia hemisphaerica|type=polypeptide|length=1686bp
MLSFGALNATISEDSSSAIFHEVQKEEQEATALHLYNEALSAEKENSVEA
PAKFKEVLECELLVEAPESLQEGEILSQNPALFLKYNVLKKLANIAEKDA
EKEKAIGFFLEAALVDESDLWLWCKIGQLSMDVLNLRLARYAFEKGLVYS
PNHWKCLDQLISVLYIVGDYHACLKMICHAFERNSSYRKGFAFRDQIFME
EPHFKKEFLSLSALYLSDSEDSEDEDKESEPSYQKFIEEALVIRGRRNLQ
AKREEPNLFRVTKPLPYYSWYCFSEVLLHIYHESNKENSEYSLGFSVDMS
TLRRTPEQQANLPVPSPDVLAKKYAKSIRDTDGVKGVKRKKLVLTPQEKE
MEPQPKRRSSRVSKQSKAKELDFNLNELVYSFLPSDFRPTADSEDSQESK
ASIEVTAKTPSQQHFGTTEDLQKESIAVSNFINKNVLKKTCITIMEEFLM
ALSDVWHHKWETRLTSKFIKIYHTYRKHTQLPNIFENDNLEYAAKIGRVI
LLGLELQLDSWLNQRSCGVKLSHSSPALDQEEMKTKFQQDFSYLSLLASN
NDLLLNETKDTHHFVVRFFYLYGRSCMDGNQIPQATNAFYNCLDYLDSYG
ETFEDIVLHNCQTNNIINKENVDKMIERLNQSQTTDELQQIFDSKEYEKI
VTMLEPCLMDQKVAKSKERPTQLYLLTQSYSNTSCHEKCFGCIKLILNEA
MSNNTIVDGWKVNFNEVLKVLDSYFVCQEKKNLLSDNFVQSLCEQLAKLL
EANADCESNDDCDVTTLPWLLIYRIIKWKNMPETSTQTSDQLNEEEVIHV
DDDVSQGSEDSIDSTASSKKGGLQFLRTAHNHLARKHWCCHDDGVLLHCL
VDELSSALHMSTGKEREALSKELEQCFYCLYGNPCKKIKTKLVVDHNVEA
VSLSWKNSKVMYDFYTPNAIPQLNIKTHTISLEVQHVLKKITTVVPQKQV
EVISFETLQHFIDGSGSLPSMDHEDAIRKKESCNGMEDLFYYLGDFYFKN
KEFQKALKFYMHDVCLNPNRFQSWAAMAFTRASRLEEKLNECEQKSDGLV
KKLITSTLRCFEKAIKINSKRCLILEEYGQTAYMINSYASRKLKGLKEKL
DSSQLAYYAKLRKSMLLLTEKCFLDAFDCTTSKEGEQWLHLYMLGKTAEK
LGKPPTVFLEYYQKSMTELYQSGGKFIKKITYRSPPQYSIESVEMFYRVH
ASIMKLLKYSENLNYQLMEEHLDRVTKHAIYLDILEMDNSVVKDYYNTCR
SKDPIRLFLHELVDEICQKEENNIIQQECQVILDEILDKIAPSQSDCSKT
PDSKPETPLMETDEPILNFNAPKAGGFSVKSTAEDSPYIDIYSNNMETCA
TNMEINDEPNMEIDEEPIQIEDSNDHCYVDPALKTAKDILDMIISKVCEN
TESNDDNDSKVVEEILKGLIDQVCEEDQDDQGVNTNINRTILNRDFASNE
EKDRYLLIADRCLQGFGFCLRRFHEHYKSQYSMAYFLAHSPLLKNLQWSR
DLLLGTFGDPSKYSIPLPNHGIFSGRKKTNMFQYIWRVPVNEIDRPGSFC
HHNNQSTVLLLHVLYQLKDYPLLLHVSTFLHKTPDKERKYLRDEDRSTLA
NKAFDMVIEIMESKLGSEQVKTKKEWKRMLIDSHEAYKHSQKMCNDQKRV
ETLVLDVYRKFTKVNEALPEKEVLEEAIKFCQQLKC
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_002714XLOC_002714Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00004804TCONS_00004804Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR019734TPR_repeat
IPR011990TPR-like_helical_dom
IPR013026TPR-contain_dom
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 739..759
NoneNo IPR availableCOILSCoilCoilcoord: 1025..1052
NoneNo IPR availableGENE3D1.25.40.120coord: 967..1685
e-value: 6.2E-9
score: 34.8
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 345..368
IPR019734Tetratricopeptide repeatSMARTSM00028tpr_5coord: 987..1020
e-value: 13.0
score: 14.0
coord: 120..153
e-value: 100.0
score: 6.0
coord: 86..119
e-value: 19.0
score: 12.6
coord: 566..599
e-value: 480.0
score: 0.2
coord: 154..187
e-value: 360.0
score: 1.2
IPR019734Tetratricopeptide repeatPROSITEPS50005TPRcoord: 86..119
score: 5.782
IPR019734Tetratricopeptide repeatPROSITEPS50005TPRcoord: 120..153
score: 6.284
IPR019734Tetratricopeptide repeatPROSITEPS50005TPRcoord: 987..1020
score: 10.502
IPR011990Tetratricopeptide-like helical domainGENE3D1.25.40.10coord: 21..608
e-value: 3.4E-14
score: 52.3
IPR011990Tetratricopeptide-like helical domainSUPERFAMILY48452TPR-likecoord: 987..1024
coord: 87..187
coord: 1055..1088
IPR013026Tetratricopeptide repeat-containing domainPROSITEPS50293TPR_REGIONcoord: 86..187
score: 9.025
IPR013026Tetratricopeptide repeat-containing domainPROSITEPS50293TPR_REGIONcoord: 987..1020
score: 9.8

Blast
BLAST of TCONS_00004804-protein vs. Swiss-Prot (Human)
Match: CABIN (Calcineurin-binding protein cabin-1 OS=Homo sapiens GN=CABIN1 PE=1 SV=1)

HSP 1 Score: 597.045 bits (1538), Expect = 2.750e-180
Identity = 416/1314 (31.66%), Postives = 664/1314 (50.53%), Query Frame = 0
Query:    1 MLSFGALNATIS-EDSSSAIF--HEVQ-KEEQEATALHLYNEALSAEKENSVEAPAK-FKEVLECELLVEAPESLQEGEILSQNPALFLKYNVLKKLANIAEKDAEKEKAIGFFLEAALVDESDLWLWCKIGQLSMDVLNLRLARYAFEKGLVYSPNHWKCLDQLISVLYIVGDYHACLKMICHAFERNSSYRKGFAFRDQIFMEEPHFKKEFLSL---SALYLSDSEDSEDEDKESEPSYQKFIEEALVIRGRRNLQAKRE-EPNLFRVTKPLPYYSWYCFSEVLLHIY-HESNKENSEYSLGFSVDMS------------------------TLRRTPE-------------QQANLPVPSPDVLAKKYAKSIRDTDGVKGVKRKKLVLTPQEKEMEPQPKRRSSRVSKQSKAKELDFNLNELVYSFLPSDFRPTADSEDSQESKASIEVTAKT---------PSQQHFGTTEDLQKESIAVSNFINKNVLKKTCITIMEEFLMALSDVWHHKWETRLTSKFIKIYHTYRKH-TQLPNIFEND-NLEYAAKIGRVILLGLELQLDSWL--NQRSCGVKLSHSSPALDQEEMKTKFQQDFS---------YLSLLASNNDLLLNETKDTHHFVVRFFYLYGRSCMDGNQIPQATNAFYNCLDYLDS-------YGETFEDIV--LHNCQTNNIINKENVDKMIERLNQSQTTDELQQIFDSKEYEKIVTMLEPCLMDQKVAKSK---------ERPTQLYLLTQSYSNTSCHEKCFGCIKLILNEA---MSNN---TIVDGWKVNFNEVLKVLDSYFVCQEKKNLLSDNFVQSLCEQLAKLLEANADC------ESNDDCDVTTLPWLLIYRIIKWKNMPETSTQTSDQLNEEEVIHV---DDDVSQGSEDSIDSTASSKKGGLQFLRTAHNHLARKHWCCHDDGVLLHCLVDELSSALHMSTGKE----REALSKELEQCFYCLYGNPCKKIKTKLVVDHNVEAVSLSWKNSKVMYDFYTPNAIPQLN-IKTHTISLEVQHVLKKITTVVPQKQVEVISFETLQHFIDGSGSLPSMDHEDAIRKKESCNGMEDLFYYLGDFYFKNKEFQKALKFYMHDVCLNPNRFQSWAAMAFTRASRLEEKLNECEQKSDGLVKKLITSTLRCFEKAIKINSKRCLILEEYGQTAYMINSYASRKLKGLKEKLDSSQLAYYAKLRKSMLLLTEKCFLDAFDCTTSKEGEQWLHLYMLGKTAEKLGKPPTVFLEYYQKSMTELYQSGGKFIKKITYRSPPQYSIESVEMFYRVHASIMKLL 1207
            M+   ALNA+ + ED     F  H+ Q KE QEA A  LY++AL  +K +  E  AK + E+LE  LL EA  S  E E L ++P L LKY+  K LA +A +  + E A+ F+LEA ++D +D+ LW KIG +++ ++ + LAR+AFE+GL  +P+HW CLD LI+VLY + DY  CL  IC A E++  Y KG   +++IF E+P  +K+ L +     + + D   S  E        Q  ++EAL +R +R     RE EP+L ++ +P+P+++W C  E LL +Y H +  E    SLG  +D+S                        T+   P                 + P+ SP +L  +    + D  G    K+        E+  E   KRRS+RV      KE   +  EL+  FLPS  R   D E+  +S  + EV ++          P +  F +   ++ E   V  F+ +N+     + +M  +L A+   +  +W   L    + +YH++R+H T LPN    D + ++   +  + L  +ELQLD WL    RS  V   +    +    +  +F  DF           LS  +S  DL  +   +   FVVR ++L  R       + QA   +  C + L S        G    DIV  L N   +++++ E +DK ++ L + Q+ +E+Q+++++ +Y+ +V +L P L      ++K         ERP QL LL  S      + +CF C  + LNEA   M N+      + W     ++L  ++         ++L  +   +   +L   L    DC      E+ +    + LPW++++RII W+              EE+  H       +   +E+ +  T       L  L TAH +L R+ WCC+ DG LL   V  L   L  ST ++    +E L   LEQCFYCLY  P KK K + + +H+ + V L W+++  M++++ P  +P+ +  KT T+S ++ ++LK+I T+VP+ +   +S + +  +I+G+ +      E A       N   +L+Y L D++FKNKE  KA+KFYMHD+C+ PNRF SWA MA  RASR+++KLN  E KSDG + K  T  L CF +A++I+S    +  EYG  +Y ++S+ASR+LK  + +L    +      R SML   + CF  A  C    + E+WL  YMLGK AEK  +PPTV+L +Y+++   L++   ++ KKI Y +PP+ ++E++E+++R+HASI+KLL
Sbjct:    1 MIRIAALNASSTIEDDHEGSFKSHKTQTKEAQEAEAFALYHKALDLQKHDRFEESAKAYHELLEASLLREAVSSGDEKEGL-KHPGLILKYSTYKNLAQLAAQREDLETAMEFYLEAVMLDSTDVNLWYKIGHVALRLIRIPLARHAFEEGLRCNPDHWPCLDNLITVLYTLSDYTTCLYFICKALEKDCRYSKGLVLKEKIFEEQPCLRKDSLRMFLKCDMSIHDVSVSAAET-------QAIVDEALGLRKKRQALIVREKEPDL-KLVQPIPFFTWKCLGESLLAMYNHLTTCEPPRPSLGKRIDLSDYQDPSQPLESSMVVTPVNVIQPSTVSTNPAVAVAEPVVSYTSVATTSFPLHSPGLL--ETGAPVGDISGGDKSKKGVKRKKISEESGE-TAKRRSARVRNTKCKKEEKVDFQELLMKFLPSRLR-KLDPEEEDDSFNNYEVQSEAKLESFPSIGPQRLSFDSATFMESEKQDVHEFLLENLTNGGILELMMRYLKAMGHKFLVRWPPGLAEVVLSVYHSWRRHSTSLPNPLLRDCSNKHIKDMMLMSLSCMELQLDQWLLTKGRSSAVSPRNCPAGM----VNGRFGPDFPGTHCLGDLLQLSFASSQRDLFEDGWLE---FVVRVYWLKARFLALQGDMEQALENYDICTEMLQSSTAIQVEAGAERRDIVIRLPNLHNDSVVSLEEIDKNLKSLERCQSLEEIQRLYEAGDYKAVVHLLRPTLCTSGFDRAKHLEFMTSIPERPAQLLLLQDSLLRLKDYRQCFECSDVALNEAVQQMVNSGEAAAKEEWVATVTQLLMGIEQALSADSSGSILKVSSSTTGLVRLTNNLIQVIDCSMAVQEEAKEPHVSSVLPWIILHRII-WQ--------------EEDTFHSLCHQQQLQNPAEEGMSETPM-LPSSLMLLNTAHEYLGRRSWCCNSDGALLRFYVRVLQKELAASTSEDTHPYKEELETALEQCFYCLYSFPSKKSKARYLEEHSAQQVDLIWEDALFMFEYFKPKTLPEFDSYKTSTVSADLANLLKRIATIVPRTERPALSLDKVSAYIEGTSTEVPCLPEGADPSPPVVN---ELYYLLADYHFKNKEQSKAIKFYMHDICICPNRFDSWAGMALARASRIQDKLNSNELKSDGPIWKHATPVLNCFRRALEIDSSNLSLWIEYGTMSYALHSFASRQLKQWRGELPPELVQQMEGRRDSMLETAKHCFTSAARCEGDGDEEEWLIHYMLGKVAEKQQQPPTVYLLHYRQAGHYLHEEAARYPKKIHYHNPPELAMEALEVYFRLHASILKLL 1275          

HSP 2 Score: 172.17 bits (435), Expect = 1.001e-42
Identity = 93/205 (45.37%), Postives = 126/205 (61.46%), Query Frame = 0
Query: 1447 ASNEEKDRYLLIADRCLQGFGFCLRRFHEHYKSQYSMAYFLAHSPLLKNLQWSRDLLLGTFGDPSKYSIP------LPNHGIFSGRKKTNMFQYIWRVPVNEIDRPGSFCHHNNQSTVLLLHVLYQLKDYPLLLHVSTFLHKTPDKERKYLRDEDRSTLANKAFDMVIEIMESKL-----GSEQVKTKK---EWKRMLID-SHEA 1636
            A  EE+ ++L   ++C+  F  CL RF +HYKS Y +A+   +S   +NLQW+RD+LLG+       SIP      +P  G+F  R KTN F  IWR+PV+EIDRPGSF  H N+S VLLL VL QL+D+  LL VS+ L +TPD+ +KYLRD DR  LA +AF + ++++E  L     GSE+   K       RM  D SH+A
Sbjct: 1499 AGAEEQRQFL--TEQCIASFRLCLSRFPQHYKSLYRLAFLYTYSKTHRNLQWARDVLLGS-------SIPWQQLQHMPAQGLFCERNKTNFFNGIWRIPVDEIDRPGSFAWHMNRSIVLLLKVLAQLRDHSTLLKVSSMLQRTPDQGKKYLRDADRQVLAQRAFILTVKVLEDTLSELAEGSERPGPKVCGLPGARMTTDVSHKA 1694          
The following BLAST results are available for this feature:
BLAST of TCONS_00004804-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
CABIN2.750e-18031.66Calcineurin-binding protein cabin-1 OS=Homo sapien... [more]
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