TCONS_00004980-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00004980-protein
Unique NameTCONS_00004980-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length139

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00004980-protein ID=TCONS_00004980-protein|Name=TCONS_00004980-protein|organism=Clytia hemisphaerica|type=polypeptide|length=139bp
EEHNIKGRRGMENPKKCMKCSNHGTKKCGQCLQVYYCSRDCQMAHWKIHK
PSCKPCNKPKGASTEKRKESKNMKRAKTIYVKAGSFDSYDEFDAKTELFE
LESYGNEAGEMKEIRSRFGWRDEGDSFTIRLEGCIRDSL
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_002827XLOC_002827Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00004980TCONS_00004980Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002893Znf_MYND
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.90.1410.10coord: 6..127
e-value: 3.1E-5
score: 23.0
NoneNo IPR availableSUPERFAMILY144232HIT/MYND zinc finger-likecoord: 14..56
IPR002893Zinc finger, MYND-typePFAMPF01753zf-MYNDcoord: 17..53
e-value: 4.4E-11
score: 42.6
IPR002893Zinc finger, MYND-typePROSITEPS01360ZF_MYND_1coord: 17..53
IPR002893Zinc finger, MYND-typePROSITEPS50865ZF_MYND_2coord: 17..53
score: 11.317

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00004980-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
back to top