TCONS_00005324-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00005324-protein
Unique NameTCONS_00005324-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length298

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00005324-protein ID=TCONS_00005324-protein|Name=TCONS_00005324-protein|organism=Clytia hemisphaerica|type=polypeptide|length=298bp
MEFYMICFLLFSTCLLVVVSKPAKPILIEGDIVLDPKLRKIRANAIIHEE
GEWSSHKRVKRGNTLTNKKPHEHRWRNGFIPYKLSYELSDIARESIKEAF
YEVEKYTCIQFSPWKGEDDYVEFVKGVGCYSSVGRQNGRQVVSIGEGCET
TKTVVHELLHTVGMFHEMSRYDRGLYVKILWWNIQRGAEKNFAVYDHGVI
DSMNFPYDFESAMHYYNNEFTKNGHDTIQSLENPKLRIGNYHGMSKMDVK
KVYQFYKCYKKKERPQKNECKDKYNWCKKYENHCSTQWFXKERMQGQI
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_003030XLOC_003030Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00005324TCONS_00005324Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001506Peptidase_M12A
IPR006026Peptidase_Metallo
IPR024079MetalloPept_cat_dom
IPR034035Astacin-like_dom
Vocabulary: Molecular Function
TermDefinition
GO:0004222metalloendopeptidase activity
GO:0008237metallopeptidase activity
GO:0008270zinc ion binding
Vocabulary: Biological Process
TermDefinition
GO:0006508proteolysis
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006508 proteolysis
molecular_function GO:0004222 metalloendopeptidase activity
molecular_function GO:0008237 metallopeptidase activity
molecular_function GO:0008270 zinc ion binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001506Peptidase M12APRINTSPR00480ASTACINcoord: 148..166
score: 44.3
coord: 244..257
score: 28.69
coord: 206..221
score: 48.02
coord: 167..184
score: 45.37
coord: 96..114
score: 33.51
IPR001506Peptidase M12APFAMPF01400Astacincoord: 74..259
e-value: 1.4E-58
score: 197.6
IPR006026Peptidase, metallopeptidaseSMARTSM00235col_5coord: 71..211
e-value: 8.4E-39
score: 144.9
IPR024079Metallopeptidase, catalytic domainGENE3D3.40.390.10coord: 66..260
e-value: 3.4E-50
score: 170.3
IPR034035Astacin-like metallopeptidase domainCDDcd04280ZnMc_astacin_likecoord: 77..256
e-value: 6.19213E-71
score: 218.594
NoneNo IPR availableSUPERFAMILY55486Metalloproteases ("zincins"), catalytic domaincoord: 72..258

Blast
[Close]
BLAST of TCONS_00005324-protein vs. Swiss-Prot (Human)
Match: MEP1B (Meprin A subunit beta OS=Homo sapiens GN=MEP1B PE=1 SV=3)

HSP 1 Score: 149.443 bits (376), Expect = 1.368e-40
Identity = 95/261 (36.40%), Postives = 131/261 (50.19%), Query Frame = 0 
Query:    1 MEFYMICFLLFSTCLLVVVSKPAKPILIEGDIVLDPKLRKIRANAIIHE-EGEWSSHKRVKRGNTLTNKKPHEHRWRNGFIPYKLSYELSDIARESIKEAFYEVEKYTCIQFSPWKGEDDYVEFVKGVGCYSSVG-RQNGRQVVSIGEGCETTKTVVHELLHTVGMFHEMSRYDRGLYVKILWWNIQRGAEKNFAVYDHGVIDSMNFPYDFESAMHYYNNEFTKNGHDTIQS-LENPKLRIGNYHGMSKMDVKKVYQFYKC 258
            M+ + + + LF   LLV+ S  A P   + D  +D  +  I     +   EG+     R+ R     +    ++RW +  IPY L   L   A+  I  AF      TCI F PW GE +Y+   KG GC+SSVG R+ G+Q +SIG  C+   TV HE LH +G +HE SR DR  YV+I+W  I  G E NF  Y   + DS+N PYD+ S MHY    F      TI + + + +  IG     S  D+ K+ Q Y C
Sbjct:    1 MDLWNLSWFLFLDALLVI-SGLATPENFDVDGGMDQDIFDINEGLGLDLFEGD----IRLDRAQIRNSIIGEKYRWPHT-IPYVLEDSLEMNAKGVILNAFERYRLKTCIDFKPWAGETNYISVFKGSGCWSSVGNRRVGKQELSIGANCDRIATVQHEFLHALGFWHEQSRSDRDDYVRIMWDRILSGREHNFNTYSDDISDSLNVPYDYTSVMHYSKTAFQNGTEPTIVTRISDFEDVIGQRMDFSDSDLLKLNQLYNC 255
The following BLAST results are available for this feature:
BLAST of TCONS_00005324-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
MEP1B1.368e-4036.40Meprin A subunit beta OS=Homo sapiens GN=MEP1B PE=... [more]
back to top