TCONS_00005327-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00005327-protein
Unique NameTCONS_00005327-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length184

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00005327-protein ID=TCONS_00005327-protein|Name=TCONS_00005327-protein|organism=Clytia hemisphaerica|type=polypeptide|length=184bp
MSSPSPGKRRMDTDVVKLIESNHDVTILGGLNEFVVKFFGPKDTPYEGGI
WKIRVDLPDKYPFKSPSIGFLNKIFHPNIDEASGSVCLDVINQAWTALYD
LNNVFESFLPQLLSYPNPVDPLNGDAAALYLHKPEDYKTKIKDYVKKYAS
PEVLGEKDEDNMSTSSESSLSDFSDDGDAAGMEL
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_003031XLOC_003031Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00005327TCONS_00005327Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR016135UBQ-conjugating_enzyme/RWD
IPR000608UBQ-conjugat_E2
IPR023313UBQ-conjugating_AS
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableSMARTSM00212ubc_7coord: 5..150
e-value: 1.3E-51
score: 187.4
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 155..184
IPR016135Ubiquitin-conjugating enzyme/RWD-likeGENE3D3.10.110.10coord: 16..179
e-value: 1.2E-42
score: 145.6
IPR016135Ubiquitin-conjugating enzyme/RWD-likeSUPERFAMILY54495UBC-likecoord: 5..149
IPR000608Ubiquitin-conjugating enzyme E2PFAMPF00179UQ_concoord: 30..144
e-value: 4.1E-37
score: 126.8
IPR000608Ubiquitin-conjugating enzyme E2PROSITEPS50127UBIQUITIN_CONJUGAT_2coord: 31..139
score: 32.808
IPR000608Ubiquitin-conjugating enzyme E2CDDcd00195UBCccoord: 9..145
e-value: 2.67154E-46
score: 149.66
IPR023313Ubiquitin-conjugating enzyme, active sitePROSITEPS00183UBIQUITIN_CONJUGAT_1coord: 75..91

Blast
[Close]
BLAST of TCONS_00005327-protein vs. Swiss-Prot (Human)
Match: UBE2H (Ubiquitin-conjugating enzyme E2 H OS=Homo sapiens GN=UBE2H PE=1 SV=1)

HSP 1 Score: 295.819 bits (756), Expect = 7.368e-104
Identity = 132/159 (83.02%), Postives = 151/159 (94.97%), Query Frame = 0 
Query:    1 MSSPSPGKRRMDTDVVKLIESNHDVTILGGLNEFVVKFFGPKDTPYEGGIWKIRVDLPDKYPFKSPSIGFLNKIFHPNIDEASGSVCLDVINQAWTALYDLNNVFESFLPQLLSYPNPVDPLNGDAAALYLHKPEDYKTKIKDYVKKYASPEVLGEKDE 159
            MSSPSPGKRRMDTDVVKLIES H+VTILGGLNEFVVKF+GP+ TPYEGG+WK+RVDLPDKYPFKSPSIGF+NKIFHPNIDEASG+VCLDVINQ WTALYDL N+FESFLPQLL+YPNP+DPLNGDAAA+YLH+PE+YK KIK+Y++KYA+ E L E++E
Sbjct:    1 MSSPSPGKRRMDTDVVKLIESKHEVTILGGLNEFVVKFYGPQGTPYEGGVWKVRVDLPDKYPFKSPSIGFMNKIFHPNIDEASGTVCLDVINQTWTALYDLTNIFESFLPQLLAYPNPIDPLNGDAAAMYLHRPEEYKQKIKEYIQKYATEEALKEQEE 159
The following BLAST results are available for this feature:
BLAST of TCONS_00005327-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
UBE2H7.368e-10483.02Ubiquitin-conjugating enzyme E2 H OS=Homo sapiens ... [more]
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