TCONS_00005341-protein (polypeptide) - C. hemisphaerica

Overview


Name	TCONS_00005341-protein
Unique Name	TCONS_00005341-protein
Type	polypeptide
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	415

Sequence

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>TCONS_00005341-protein ID=TCONS_00005341-protein|Name=TCONS_00005341-protein|organism=Clytia hemisphaerica|type=polypeptide|length=415bp
MLPCSSKRQILTYVLTWTIYASAYLLRKPLGVIKTDLISIYNLSPQVLGW
LDSCYLLPYAFFSIIYGNLGDKYGNRKILTCCLICMGLSMISFGYWSSPM
AFGILLFINGSAQANLWSNCVKSLSDWYEPEKRATIFGIWGTCIFAGGIM
GTTLAVQLQKAFPGEIKMVFVVPSIWVIILAVVVYIFLRSPTEVRVPVVQ
TDKESLLPVAEQTLPTQRNLNILETWRLRMVPELCWTMFGMKLVRYCLYM
WLPMYLNQNLNYSKAEAGMFSTLYEIGGVVGSASIGLFIDKVMRGNTYMG
VFVLLTLSTSALCLFQLTSQCGMVMNAIFLFLAGAGSSGPDAVISGSLAV
EIGTRENAQSAVSGLINGFGSLGAILEGPFIAMVLTYFGWSGTFYVMVLL
TFLSAISIARPAFQK

Run BLAST on NCBI

Gene-mRNA-Prot

This polypeptide comes from the following gene feature:


Feature Name	Unique Name	Species	Type
XLOC_003036	XLOC_003036	Clytia hemisphaerica	gene

This polypeptide derives from the following transcript feature(s):


Feature Name	Unique Name	Species	Type
TCONS_00005341	TCONS_00005341	Clytia hemisphaerica	transcript

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR000849	Sugar_P_transporter
IPR011701	MFS
IPR020846	MFS_dom

Vocabulary: **Molecular Function**
Term	Definition
GO:0005215	transporter activity

Vocabulary: **Cellular Component**
Term	Definition
GO:0016021	integral component of membrane

Vocabulary: **Biological Process**
Term	Definition
GO:0006810	transport
GO:0055085	transmembrane transport

GO Annotation

GO Assignments

This polypeptide is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0055085	transmembrane transport
biological_process	GO:0006810	transport
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0005215	transporter activity

InterPro

Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	1.20.1250.20		coord: 216..410 e-value: 5.0E-23 score: 80.9
None	No IPR available	GENE3D	1.20.1250.20		coord: 3..204 e-value: 3.7E-30 score: 104.2
IPR000849	Sugar phosphate transporter	PIRSF	PIRSF002808	Hexose_phosphate_transp	coord: 4..414 e-value: 4.3E-70 score: 234.6
IPR011701	Major facilitator superfamily	PFAM	PF07690	MFS_1	coord: 19..376 e-value: 4.5E-42 score: 144.1
IPR020846	Major facilitator superfamily domain	PROSITE	PS50850	MFS	coord: 1..415 score: 19.098
IPR020846	Major facilitator superfamily domain	CDD	cd06174	MFS	coord: 14..410 e-value: 7.8269E-29 score: 113.563
IPR020846	Major facilitator superfamily domain	SUPERFAMILY	103473	MFS general substrate transporter	coord: 5..408

Blast

[Close]

BLAST of TCONS_00005341-protein vs. Swiss-Prot (Human)
Match: G6PT3 (Glucose-6-phosphate exchanger SLC37A2 OS=Homo sapiens GN=SLC37A2 PE=2 SV=2)

HSP 1 Score: 129.028 bits (323), Expect = 7.213e-33
Identity = 121/470 (25.74%), Postives = 210/470 (44.68%), Query Frame = 0

Query:   11 LTYVLTWTIYASAYLLRKPLGVIKTDLISIYNLSPQV----------------------------LGWLDSCYLLPYAFFSIIYGNLGDKYGNRKILTCCLICMGL--SMISFGYWSSPMA---FGILLFINGSAQANLWSNCVKSLSDWYEPEKRATIFGIWGTCIFAGGIMGTTLAVQLQKAFPGEIKMVFVVPSIWVIILAVVVYIFL-RSPTEVRVPVVQTDKESLLPVAEQTLPTQRNLNILET------------------------WRLRMVPELCWTMFGMKLVRYCLYMWLPMYLNQNLNYSKAEAGMFSTLYEIGGVVGSASIGLFIDKVM-RGNTYMGVFVLLTLSTSALCLFQLTSQCGMVMNAIFLFLAGAGSSGPDAVISGSLAVEIGTREN------AQSAVSGLINGFGSLGAILEGPFIAMVLTYFGWSGTFYVMVLLTFLSAISIARPAFQK 415
            L  +LT+ IYA  ++ RKP+ ++K+ L    N S Q+                            LG +D+ +L+ YA    I G  G++   R  L+  ++  GL  S+   GY+ +      F ++   NG  Q   W + V  + +W+   KR  I GIW +    G I+G+ +A        G+  + F+VP I   ++ V+ ++FL   P +V     Q   E          P     +I E+                         R+  V E    +   KLV Y    WLP+Y+    ++S  EAG  STL+++GG++G    GL  D    R  T     V+L L+   + L+    Q G+  + + L + G   +GP A+I+ +++ ++GT ++      A S V+ +I+G GS+GA L GP +A +++  GW+  FY+++    L+ + + R  +++
Sbjct:   24 LILLLTFLIYACYHMSRKPISIVKSRLHQ--NCSEQIKPINDTHSLNDTMWCSWAPFDKDNYKELLGGVDNAFLIAYAIGMFISGVFGERLPLRYYLSAGMLLSGLFTSLFGLGYFWNIHELWYFVVIQVCNGLVQTTGWPSVVTCVGNWFGKGKRGFIMGIWNSHTSVGNILGSLIAGIWVN---GQWGLSFIVPGIITAVMGVITFLFLIEHPEDVDCAPPQHHGEPAENQDNPEDPGNSPCSIRESGLETVAKCSKGPCEEPAAISFFGALRIPGVVEFSLCLLFAKLVSYTFLYWLPLYIANVAHFSAKEAGDLSTLFDVGGIIGGIVAGLVSDYTNGRATT---CCVMLILAAPMMFLYNYIGQDGIASSIVMLIICGGLVNGPYALITTAVSADLGTHKSLKGNAKALSTVTAIIDGTGSIGAAL-GPLLAGLISPTGWNNVFYMLISADVLACLLLCRLVYKE 484

The following BLAST results are available for this feature:

BLAST of TCONS_00005341-protein vs. Swiss-Prot (Human)

BLAST of TCONS_00005341-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
G6PT3	7.213e-33	25.74	Glucose-6-phosphate exchanger SLC37A2 OS=Homo sapi...	[more]

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TCONS_00005341-protein (polypeptide) - C. hemisphaerica