TCONS_00005939-protein (polypeptide) - C. hemisphaerica

Overview


Name	TCONS_00005939-protein
Unique Name	TCONS_00005939-protein
Type	polypeptide
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	1144

Sequence

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>TCONS_00005939-protein ID=TCONS_00005939-protein|Name=TCONS_00005939-protein|organism=Clytia hemisphaerica|type=polypeptide|length=1144bp
MGSIVAKKKKKETSSGAQDSAGQSRGAQPPGSVSQNNNNHPPKQEVSECK
EEPVQQGIDESKEQPIKIIKTVKAPEAKAEEVKLSFEEVVALKPTSPDEM
WNIVKQSSDANKINLQPATSRKGWKTIRLFVSSTFKDFHQEREVLVKEVF
PDLRLWCEARKLRLVECDLRWGVPKDSTSEETIKICLSELDRCCEDNTAP
FFLNLAGDRAGWIPKFEDFSLNLASQYGWVYGLSVTEMEIVHGAMRKLNP
NALFLIRDIDGKENIPDDLKNDFEEAEFKTKLEKLKETISKTFPETNVKN
YSVKCQFNSDGSIKLSGLTGEESEFSHIVYSFFQSKIEELYPLDESPMDP
LQIQRDAHEMFLDSRSSCVLGRDKILQQIEDYVMKGHTTEAPLLVVGIAG
AGKSALMAKSAHRATELVTDGAITMPGNVKKCRVFFHFVGATPRSTDLAS
FLQRLVKEINPSQKEGLSDLDSLISLSYNLLENESTEPVIVFVDAINQMD
EDKQQYLNRWLPEKLSPNVRVVLSTIESTTSHQTIRAFKSSPVETICGPL
DKDSRQAIVENILRAYNKRLHDDQMKVLLDKDGSSNPLWLTLACEELRVY
GKFETLTDKIHELPDDLISLEETVFARFEKETGGELMKACVCMLEVSRHG
LLETELLALLGEKKNVEIPEYQEIDEEALLGKTQTKTETTENIEETKQNL
TKLVQETYVKDESKNEGSGKGGKKAETKVKFKRPKGKQINFLPARDWALI
YRNLKPLLRPCGDLGEGRLDFYHRSLSKAARRRYFSGEEKIKKHAYNFWH
GVLADYFEGVDDMDRKAEELPYHLENLLDNNRLIRCLMDWEVFNRLYSEE
FSIDLLHAWRQCGGFGVASAVYKEQLAILRTSDMPLIEYVEIVENVYTFL
IQAGQYQEAIELMEQRLNDELSDLGERPDEMADVYQNMARCKSEIDKAQQ
YITREQIIDNRQIVEYCRKCLNYRQQLPESQDNKYRCACVRILMAHHLSN
IADLTGEMNAQNEAFKTIDEAIDVFTELNDMGHLAECKMTKGIIDYDKPF
DFREPLLRESLSICMKAYGEHHLLTTRILLNTGIMYEMHGDYQKAFQNFK
DLKRVCLAVFGHGHPKTVRAIKTISDPRYQRMLQAEERQAAGVA

Run BLAST on NCBI

Gene-mRNA-Prot

This polypeptide comes from the following gene feature:


Feature Name	Unique Name	Species	Type
XLOC_003378	XLOC_003378	Clytia hemisphaerica	gene

This polypeptide derives from the following transcript feature(s):


Feature Name	Unique Name	Species	Type
TCONS_00005939	TCONS_00005939	Clytia hemisphaerica	transcript

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR025139	DUF4062
IPR011990	TPR-like_helical_dom
IPR011991	WHTH_DNA-bd_dom
IPR027417	P-loop_NTPase

Vocabulary: **Molecular Function**
Term	Definition
GO:0005515	protein binding

GO Annotation

GO Assignments

This polypeptide is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0005515	protein binding

InterPro

Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 686..706
None	No IPR available	GENE3D	3.40.50.300		coord: 366..543 e-value: 1.8E-10 score: 40.3
None	No IPR available	PFAM	PF05729	NACHT	coord: 393..565 e-value: 2.4E-9 score: 37.2
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..62
IPR025139	Domain of unknown function DUF4062	PFAM	PF13271	DUF4062	coord: 128..224 e-value: 1.8E-9 score: 37.7
IPR011990	Tetratricopeptide-like helical domain	GENE3D	1.25.40.10		coord: 773..1040 e-value: 2.0E-4 score: 20.5
IPR011990	Tetratricopeptide-like helical domain	SUPERFAMILY	48452	TPR-like	coord: 1069..1105 coord: 900..924 coord: 995..1029
IPR011991	Winged helix-turn-helix DNA-binding domain	GENE3D	1.10.10.10		coord: 1052..1142 e-value: 4.4E-10 score: 39.2
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 354..611

Blast

[Close]

BLAST of TCONS_00005939-protein vs. Swiss-Prot (Human)
Match: TEP1 (Telomerase protein component 1 OS=Homo sapiens GN=TEP1 PE=1 SV=2)

HSP 1 Score: 200.29 bits (508), Expect = 8.377e-52
Identity = 169/591 (28.60%), Postives = 288/591 (48.73%), Query Frame = 0

Query:  119 TSRKGWKTIRLFVSSTFKDFHQEREVLVKEVFPDLRLWCEARKLRLVECDLRWGVPKDSTSE-ETIKICLSELDRCCEDNTAPFFLNLAGDRAGWIPKFEDFSLNLASQYGWV----YGLSVTEMEIVHGAMR--KLNPNALFLI--RDIDGKENIPDDLKNDF--EEAEFKTKLEKLKETISKTFPETNVKNYSVKCQFN--SDGSIKLSGLTGEESEFSHIVYSFFQSKIEELYPLDESPMD-PLQIQRD--AHEMFLDSRSSCVLGRDKILQQIEDYVMKGHTTEAPLLVVGIAGAGKSALMAKSAHRATELVTDGAITMPGNVKKCR-VFFHFVGATPRSTDLASFLQRLVKEINPSQKEGLSDLDSLISLSYNLLEN------ESTEP---VIVFVDAINQMDEDKQQYLNRWLPEKLSPNVRVVLSTIESTTSHQTIRAFKSSPVETICGPLDKDSRQAIVENILRAYNKRLH----DDQMKVLLDKDGSSNPLWLTLACEELRVYGKFETLTDKIHELPDDLISLEETVFARFEKETGGELMKACVCMLEVSRHGLLETELLALLGEKKNVEIPEYQEIDEEAL 679
             S++GW++IRLF+SSTF+D H ER++L++ V P L+      ++ L   DLRWGV ++ T     +++CL E++       A  F+ + G R G+IP    ++L     + W      G SVTEME++    R  +L P+A  LI  RD     ++PD  K+DF  E  E   ++ +LK  +S+   +  +      C++   + G   + GL     EF  +V     + I++LY    + ++ P+ I  D      F   +      R ++LQ     +M  H   +  LV G +G GK+A +A        LV+  A+  P   K    VFFHF GA P      + L+RL   +    KE  +   +  SL + L +       ES  P    ++ +D  +++ +   Q ++ W+P+KL   V +VLS        +T+   + + V  + GPL+  +R  +V   L  Y KRL     ++QM++LL K  S  PL+L L  + LR++  +E +++++  LP  +  L + + +  EKE G +++   +  LEV+R GL   +L  +L   +   +P+  +  EEA+
Sbjct:  891 VSQQGWRSIRLFISSTFRDMHGERDLLLRSVLPALQARAAPHRISLHGIDLRWGVTEEETRRNRQLEVCLGEVE------NAQLFVGILGSRYGYIPP--SYNLPDHPHFHWAQQYPSGRSVTEMEVMQFLNRNQRLQPSAQALIYFRDSSFLSSVPDAWKSDFVSESEEAARRISELKSYLSR---QKGITCRRYPCEWGGVAAGRPYVGGL----EEFGQLVLQDVWNMIQKLYLQPGALLEQPVSIPDDDLVQATFQQLQKPPSPARPRLLQDTVQRLMLPHGRLS--LVTGQSGQGKTAFLA-------SLVS--ALQAPDGAKVASLVFFHFSGARPDQGLALTLLRRLCTYLRGQLKEPGALPSTYRSLVWELQQRLLPKSAESLHPGQTQVLIIDGADRLVDQNGQLISDWIPKKLPRCVHLVLSVSSDAGLGETLEQSQGAHVLAL-GPLEASARARLVREELALYGKRLEESPFNNQMRLLLVKRESGRPLYLRLVTDHLRLFTLYEQVSERLRTLPATVPLLLQHILSTLEKEHGPDVLPQALTALEVTRSGLTVDQLHGVLSVWRT--LPKGTKSWEEAV 1452

The following BLAST results are available for this feature:

BLAST of TCONS_00005939-protein vs. Swiss-Prot (Human)

BLAST of TCONS_00005939-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
TEP1	8.377e-52	28.60	Telomerase protein component 1 OS=Homo sapiens GN=...	[more]

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TCONS_00005939-protein (polypeptide) - C. hemisphaerica