TCONS_00005998-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00005998-protein
Unique NameTCONS_00005998-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length301

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00005998-protein ID=TCONS_00005998-protein|Name=TCONS_00005998-protein|organism=Clytia hemisphaerica|type=polypeptide|length=301bp
DFENKKLYRAALQMKMTEAPAKVAKLDNENNKEDGMGDNEHQDLVEQIDS
IQGQIDGLNEQASEEILQVEQKYNNLRKPFFGKRADLIKKIPKFWVTVFV
NHPQISALLDEEDEEALHYLQSVEVEEFEDIKSGYRIRFHFSDNPYFEND
LICKEFMLSENGEQTCKSTNIRWKENMDLTTRQAETATKAGQKRQHEEPE
SFFSWFNDQSEVGTDEVGELIKDEIWPNPLQFFLGGGNDTEEGEEDDENV
VLIEDEDDDDDDDDDEEPDEGDFEGEDDDEEFDDEEGDEDEDGAEEEEGN
E
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_003425XLOC_003425Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00005998TCONS_00005998Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002164NAP_family
Vocabulary: Biological Process
TermDefinition
GO:0006334nucleosome assembly
Vocabulary: Cellular Component
TermDefinition
GO:0005634nucleus
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006334 nucleosome assembly
cellular_component GO:0005634 nucleus
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 41..61
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 185..209
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 232..301
NoneNo IPR availableSUPERFAMILY143113NAP-likecoord: 21..235
IPR002164Nucleosome assembly protein (NAP)PFAMPF00956NAPcoord: 89..235
e-value: 4.8E-32
score: 111.1

Blast
[Close]
BLAST of TCONS_00005998-protein vs. Swiss-Prot (Human)
Match: SET (Protein SET OS=Homo sapiens GN=SET PE=1 SV=3)

HSP 1 Score: 290.812 bits (743), Expect = 2.696e-98
Identity = 133/198 (67.17%), Postives = 162/198 (81.82%), Query Frame = 0 
Query:   37 GDNEHQDLVEQIDSIQGQIDGLNEQASEEILQVEQKYNNLRKPFFGKRADLIKKIPKFWVTVFVNHPQISALLDEEDEEALHYLQSVEVEEFEDIKSGYRIRFHFSDNPYFENDLICKEFMLSENGEQTCKSTNIRWKENMDLTTRQAETATKAGQKRQHEEPESFFSWFNDQSEVGTDEVGELIKDEIWPNPLQFFL 234
            G+ E Q+ +E ID +Q +ID LNEQASEEIL+VEQKYN LR+PFF KR++LI KIP FWVT FVNHPQ+SALL EEDEEALHYL  VEV EFEDIKSGYRI F+F +NPYFEN ++ KEF L+E+G+ + KST I+WK   DLT R ++T  KA +KRQHEEPESFF+WF D S+ G DE+GE+IKD+IWPNPLQ++L
Sbjct:   37 GEKEQQEAIEHIDEVQNEIDRLNEQASEEILKVEQKYNKLRQPFFQKRSELIAKIPNFWVTTFVNHPQVSALLGEEDEEALHYLTRVEVTEFEDIKSGYRIDFYFDENPYFENKVLSKEFHLNESGDPSSKSTEIKWKSGKDLTKRSSQTQNKASRKRQHEEPESFFTWFTDHSDAGADELGEVIKDDIWPNPLQYYL 234
The following BLAST results are available for this feature:
BLAST of TCONS_00005998-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
SET2.696e-9867.17Protein SET OS=Homo sapiens GN=SET PE=1 SV=3[more]
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