TCONS_00006013-protein (polypeptide) - C. hemisphaerica

Overview


Name	TCONS_00006013-protein
Unique Name	TCONS_00006013-protein
Type	polypeptide
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	384

Sequence

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>TCONS_00006013-protein ID=TCONS_00006013-protein|Name=TCONS_00006013-protein|organism=Clytia hemisphaerica|type=polypeptide|length=384bp
MIMKLFFIFLISIQLSNGLDKNGYVVYCPCMGRFGNQADQLLGSMAFTKA
LNRTLILPHWVTYPSSMPMSSKQIPFDRWFQIEPIREYQKVITMKKFMKD
LAPKVWPAAERKGFCYRPRSESEETCGMKEGNPFGPFWDHFGISFKDSVF
HEELLWSTHKYNVEEWHRKFPAGQYPVYAFPGAPGNFPSLPEHHSIQKYL
HFSKLINRISDEYIENELEGKPFLAIHLRNGLDMTRVCDEIDNDKYHSLF
SSAQCTQLEGNPKLTSAMCNPPKEDIIQKVVHHIKKMKLKALFIATDNDP
MIKDFKKAFKAIKFPVSIHRRVHKDVETECDGPLIDIALMSKADMFIGNC
VSSFTAFVRRQRFSRGKQMDFFNLKSNKPLHTEL

Run BLAST on NCBI

Gene-mRNA-Prot

This polypeptide comes from the following gene feature:


Feature Name	Unique Name	Species	Type
XLOC_003433	XLOC_003433	Clytia hemisphaerica	gene

This polypeptide derives from the following transcript feature(s):


Feature Name	Unique Name	Species	Type
TCONS_00006013	TCONS_00006013	Clytia hemisphaerica	transcript

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR019378	GDP-Fuc_O-FucTrfase

InterPro

Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR019378	GDP-fucose protein O-fucosyltransferase	PFAM	PF10250	O-FucT	coord: 24..362 e-value: 1.4E-71 score: 241.8
None	No IPR available	CDD	cd11302	O-FucT-1	coord: 20..372 e-value: 2.58385E-174 score: 491.746

Blast

[Close]

BLAST of TCONS_00006013-protein vs. Swiss-Prot (Human)
Match: OFUT1 (GDP-fucose protein O-fucosyltransferase 1 OS=Homo sapiens GN=POFUT1 PE=1 SV=1)

HSP 1 Score: 263.848 bits (673), Expect = 3.174e-85
Identity = 140/376 (37.23%), Postives = 216/376 (57.45%), Query Frame = 0

Query:   16 SNGLDKNGYVVYCPCMGRFGNQADQLLGSMAFTKALNRTLILPHWVTYPSSM-PMSSKQIPFDRWFQIEPIREYQKVITMKKFMKDLAPKVWPAAERKGFCYR---PRSESEETCGMKEGNPFGPFWDHFGISFKDSVFHEELLWSTHKYNVEEWHRKFPAGQYPVYAFPGAPGNFPSLPEHHSIQKYLHFSKLINRISDEYIENELEGKPFLAIHLRNGLDMTRVCDEIDNDKYHSLF-SSAQCTQLEGNPK--LTSAMCNPPKEDIIQKVVHHIKKMKLKALFIATDNDPMIKDFKKAFKAIKFPVSIHRRVHKDVETECDGPLIDIALMSKADMFIGNCVSSFTAFVRRQRFSRGKQMDFFNLKSNKPLHTEL 384
            +   D  GY++YCPCMGRFGNQAD  LGS+AF K LNRTL +P W+ Y     P ++  + + ++F++EP++ Y +VI+++ FM+ LAP  WP  +R  +C+     RS  ++TC MKEGNPFGPFWD F +SF  S     + +S   Y  E+W ++F   ++PV A PGAP  FP L EH  +QKY+ +S  + +  +  I   L  +P++ IHLR G D    C  + +    S F +S QC     +    LT  MC P  ++I + V   ++ +  +++++ATD++  + + ++ FK     VS+   V +          +D+ ++ +AD FIGNCVSSFTAFV+R+R  +G+   FF +     L  E 
Sbjct:   26 AGSWDPAGYLLYCPCMGRFGNQADHFLGSLAFAKLLNRTLAVPPWIEYQHHKPPFTNLHVSYQKYFKLEPLQAYHRVISLEDFMEKLAPTHWPPEKRVAYCFEVAAQRSPDKKTCPMKEGNPFGPFWDQFHVSFNKSELFTGISFSA-SYR-EQWSQRFSPKEHPVLALPGAPAQFPVLEEHRPLQKYMVWSDEMVKTGEAQIHAHLV-RPYVGIHLRIGSDWKNACAMLKDGTAGSHFMASPQCVGYSRSTAAPLTMTMCLPDLKEIQRAVKLWVRSLDAQSVYVATDSESYVPELQQLFKGKVKVVSLKPEVAQ----------VDLYILGQADHFIGNCVSSFTAFVKRERDLQGRPSSFFGMDRPPKLRDEF 388

The following BLAST results are available for this feature:

BLAST of TCONS_00006013-protein vs. Swiss-Prot (Human)

BLAST of TCONS_00006013-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
OFUT1	3.174e-85	37.23	GDP-fucose protein O-fucosyltransferase 1 OS=Homo ...	[more]

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TCONS_00006013-protein (polypeptide) - C. hemisphaerica