TCONS_00006492-protein (polypeptide) - C. hemisphaerica

Overview


Name	TCONS_00006492-protein
Unique Name	TCONS_00006492-protein
Type	polypeptide
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	571

Sequence

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>TCONS_00006492-protein ID=TCONS_00006492-protein|Name=TCONS_00006492-protein|organism=Clytia hemisphaerica|type=polypeptide|length=571bp
MQFRNSIILTSLPPKLFDRTEMEKVDGSIMDLVLEDSLVSKESQKEYKQR
WRSIRILYATMFFDSLSFSIVLSSIWPYMKKINPDPNLSPVYAGWANVGF
QLAGILMDFVMGVWTNRRGSTEPLLGALFLFALGNLLYGYAQACGTYGIA
MVIFSRAVIGLSTGTNVVTRVVAAEATTLKERTKVMAHMSIAQGLGFSFG
PAIQLASVPLGDDGIYIESLRLHLDLYTAPAFVSVVVAILNVTAVLVWYK
EFHVDIYHDSQDDHKIDSYRQLLQKHGAPKIKIDKKAILATLFLYFVVQN
AFALHETIFTPLAMDQFAWTRSQATLWVGIIFFIAGCIAVFTFAITDVLE
KKINDRKLLLFGFILTFIGFTVYLPWGNNYPKLKQSVFKNTIGELNTNNT
VLNTTAGHQKALVDFVGCPEEYTWCHDTPQMHLSQLVLGMLCLSVGYPLV
MVLTTSIYSKIIGPKPQGLLQSWLAAVGGVARTAGPALVTYMYVLAGPRW
TFLTVDGFLIAALLVIAVCYKRLVPYHLMVLKKNKNIISTDIEKNQMLSR
LQSCSSAETYLEDANEILTVV

Run BLAST on NCBI

Gene-mRNA-Prot

This polypeptide comes from the following gene feature:


Feature Name	Unique Name	Species	Type
XLOC_003684	XLOC_003684	Clytia hemisphaerica	gene

This polypeptide derives from the following transcript feature(s):


Feature Name	Unique Name	Species	Type
TCONS_00006492	TCONS_00006492	Clytia hemisphaerica	transcript

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR011701	MFS
IPR020846	MFS_dom

Vocabulary: **Biological Process**
Term	Definition
GO:0055085	transmembrane transport

Vocabulary: **Cellular Component**
Term	Definition
GO:0016021	integral component of membrane

GO Annotation

GO Assignments

This polypeptide is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0055085	transmembrane transport
cellular_component	GO:0016021	integral component of membrane

InterPro

Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	1.20.1250.20		coord: 43..265 e-value: 2.4E-22 score: 78.7
None	No IPR available	GENE3D	1.20.1250.20		coord: 278..537 e-value: 6.9E-21 score: 73.9
IPR011701	Major facilitator superfamily	PFAM	PF07690	MFS_1	coord: 59..378 e-value: 7.1E-26 score: 90.9
IPR020846	Major facilitator superfamily domain	PROSITE	PS50850	MFS	coord: 53..524 score: 13.313
IPR020846	Major facilitator superfamily domain	CDD	cd06174	MFS	coord: 54..520 e-value: 8.63716E-15 score: 73.5021
IPR020846	Major facilitator superfamily domain	SUPERFAMILY	103473	MFS general substrate transporter	coord: 48..381 coord: 435..526

Blast

[Close]

BLAST of TCONS_00006492-protein vs. Swiss-Prot (Human)
Match: MFSD8 (Major facilitator superfamily domain-containing protein 8 OS=Homo sapiens GN=MFSD8 PE=1 SV=1)

HSP 1 Score: 333.569 bits (854), Expect = 5.106e-108
Identity = 184/494 (37.25%), Postives = 279/494 (56.48%), Query Frame = 0

Query:   42 ESQKEYKQRWRSIRILYATMFFDSLSFSIVLSSIWPYMKKINPDPNLSPVYAGWANVGFQLAGILMDFVMGVWTNRRGSTEPLLGALFLFALGNLLYGYAQACGTYGIAMVIFSRAVIGLSTGTNVVTRVVAAEATTLKERTKVMAHMSIAQGLGFSFGPAIQLASVPLGDDGIYIESLRLHLDLYTAPAFVSVVVAILNVTAVLVWYKEFHVDIYHDSQDDHKIDSYRQLLQKHG-APKIKIDKKAILATLFLYFVVQNAFALHETIFTPLAMDQFAWTRSQATLWVGIIFFIAGCIAVFTFAITDVLEKKINDRKLLLFGFILTFIGFTVYLPWGNNYPKLKQSVFKNTIGELNTNNTVLNTTAGH------QKALVDF----VGCPEEYTWCHDTPQMHLSQLVLGMLCLSVGYPLVMVLTTSIYSKIIGPKPQGLLQSWLAAVGGVARTAGPALVTYMYVLAGPRWTFLTVDGFLIAALLVIAVCYKRLV 524
            E+++ YK RWRSIRILY TMF  S+ FS+V+ SIWPY++KI+P  + S  + GW    + L  ++   + G+W+N R   EPL+ ++ +    N LY Y     ++    ++ +R ++G+  G   V R   A AT+L+ERT  MA++S+ Q LGF  GP  Q     LG+ G+  + ++L +++YT P  +S  + ILN+  +L   +E  VD   DS    K  ++ +        P+  ID+ A++A   L+FV    FAL ETI TPL MD +AWT+ QA L+ GII    G  AV  F    +L KKI +R +LL G I+ ++GF + LPWGN +PK++         E   NN++ NTT G       +  + D      GC  E  WC  TP +HL+Q +   + + +GYP+  +++ ++YSKI+GPKPQG+   WL A G  AR  GP  ++ +Y   GPRW F  V G ++  + ++ V YKRL+
Sbjct:   27 ETEEHYKSRWRSIRILYLTMFLSSVGFSVVMMSIWPYLQKIDPTADTS--FLGWVIASYSLGQMVASPIFGLWSNYRPRKEPLIVSILISVAANCLYAYLHIPASHNKYYMLVARGLLGIGAGNVAVVRSYTAGATSLQERTSSMANISMCQALGFILGPVFQTCFTFLGEKGVTWDVIKLQINMYTTPVLLSAFLGILNIILILAILREHRVD---DSGRQCKSINFEEASTDEAQVPQGNIDQVAVVAINVLFFVTLFIFALFETIITPLTMDMYAWTQEQAVLYNGIILAALGVEAVVIFLGVKLLSKKIGERAILLGGLIVVWVGFFILLPWGNQFPKIQW--------EDLHNNSIPNTTFGEIIIGLWKSPMEDDNERPTGCSIEQAWCLYTPVIHLAQFLTSAVLIGLGYPVCNLMSYTLYSKILGPKPQGVYMGWLTASGSGARILGPMFISQVYAHWGPRWAFSLVCGIIVLTITLLGVVYKRLI 507

The following BLAST results are available for this feature:

BLAST of TCONS_00006492-protein vs. Swiss-Prot (Human)

BLAST of TCONS_00006492-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
MFSD8	5.106e-108	37.25	Major facilitator superfamily domain-containing pr...	[more]

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TCONS_00006492-protein (polypeptide) - C. hemisphaerica