TCONS_00006691-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00006691-protein
Unique NameTCONS_00006691-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length359

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00006691-protein ID=TCONS_00006691-protein|Name=TCONS_00006691-protein|organism=Clytia hemisphaerica|type=polypeptide|length=359bp
KQNMALNREQSFKKILIDDKPYFVQFNQNNEGDISLQLTNGNHMLLGKLP
QRDIIQMAKGLDMTTKKLENLLAQCLASKDVQDFEYQLTESDETTSKLVL
KQVVDGGFKFQLGSVPLKRSENSSQRLVSMLDHLTSELAKYKKEVEKVRN
INNTISQEQEHMTQRLKEHMETHINMEQELYTKFSMVLNSKKAKIREFKK
TIESGGGSSAKLSNIPQKDAKRCLVESDEDMETDDEKQTIKDHNKKRKLS
STDEEADEEERTTQEEERGDEKHTAKEGENIRLDDSIGDDDDMPRRSRKR
MRATKPKTPVSSVLPRTTSLPRPKSAQKSSSATGSSQRSQRSSRNTSSEV
SLDELLDNL
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_003742XLOC_003742Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00006691TCONS_00006691Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR010585DNA_repair_prot_XRCC4
IPR009089XRCC4_N
Vocabulary: Cellular Component
TermDefinition
GO:0005634nucleus
Vocabulary: Biological Process
TermDefinition
GO:0006302double-strand break repair
GO:0006310DNA recombination
Vocabulary: Molecular Function
TermDefinition
GO:0003677DNA binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006310 DNA recombination
biological_process GO:0006302 double-strand break repair
cellular_component GO:0005634 nucleus
molecular_function GO:0003677 DNA binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 124..158
NoneNo IPR availableCOILSCoilCoilcoord: 345..359
NoneNo IPR availableGENE3D2.170.210.10coord: 10..119
e-value: 5.7E-11
score: 41.8
NoneNo IPR availableGENE3D1.20.5.370coord: 127..208
e-value: 1.6E-14
score: 53.3
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 227..359
NoneNo IPR availableSUPERFAMILY58022XRCC4, C-terminal oligomerization domaincoord: 125..204
IPR010585DNA repair protein XRCC4PFAMPF06632XRCC4coord: 22..356
e-value: 1.1E-20
score: 73.7
IPR009089DNA double-strand break repair and VJ recombination XRCC4, N-terminalSUPERFAMILY50809XRCC4, N-terminal domaincoord: 10..118

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00006691-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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