TCONS_00006735-protein (polypeptide) - C. hemisphaerica

Overview


Name	TCONS_00006735-protein
Unique Name	TCONS_00006735-protein
Type	polypeptide
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	433

Sequence

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>TCONS_00006735-protein ID=TCONS_00006735-protein|Name=TCONS_00006735-protein|organism=Clytia hemisphaerica|type=polypeptide|length=433bp
VLIKMLLLRKTLTNTKKIATNQCQYNQHLKTWLLKRQIHYDVVIVGGGVM
GSSSAFFLKHKAPSLNVAVVEGDPKYSKSSSSLSVGGVREQFSTPENIRL
SQWSSHFMKNIDQYLSIDGEEPCISFFKSSYLFLATESGVDILKSNAEIQ
KNCGVDIKSVGSDEIHKYFEWVNTDGIAAANIYSGEKEGSFDGWCLLQAF
KKKAEQIGVHYIKGDCQKIDVGTTVKGITVDCDGQAMNIECDSLVNAAGP
WAGELMSKINLHLPVVPRKRYVFAFDCPKGPGRAAPLTVDPTGVYFKPDG
QTGTRYLCGCSPEEDEEPDISNLDVDYDYFESFLWPILAERYRGMEELKV
CHSWAGYYDYNTLDQNCVIGPHPHIQNLYFINGFSGHGIQQSPAAGNAIS
ELILEGKYVDIDLTRFQYERILNDRPLPEINVV

Run BLAST on NCBI

Gene-mRNA-Prot

This polypeptide comes from the following gene feature:


Feature Name	Unique Name	Species	Type
XLOC_003774	XLOC_003774	Clytia hemisphaerica	gene

This polypeptide derives from the following transcript feature(s):


Feature Name	Unique Name	Species	Type
TCONS_00006735	TCONS_00006735	Clytia hemisphaerica	transcript

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR006076	FAD-dep_OxRdtase
IPR023753	FAD/NAD-binding_dom

Vocabulary: **Molecular Function**
Term	Definition
GO:0016491	oxidoreductase activity

Vocabulary: **Biological Process**
Term	Definition
GO:0055114	oxidation-reduction process

GO Annotation

GO Assignments

This polypeptide is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0055114	oxidation-reduction process
molecular_function	GO:0016491	oxidoreductase activity

InterPro

Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	3.30.9.10		coord: 204..361 e-value: 1.9E-41 score: 141.2
None	No IPR available	GENE3D	3.30.9.10		coord: 129..203 e-value: 0.094 score: 12.4
IPR006076	FAD dependent oxidoreductase	PFAM	PF01266	DAO	coord: 41..402 e-value: 2.5E-46 score: 158.8
IPR023753	FAD/NAD(P)-binding domain	SUPERFAMILY	51905	FAD/NAD(P)-binding domain	coord: 363..422 coord: 39..265

Blast

[Close]

BLAST of TCONS_00006735-protein vs. Swiss-Prot (Human)
Match: FXRD1 (FAD-dependent oxidoreductase domain-containing protein 1 OS=Homo sapiens GN=FOXRED1 PE=1 SV=2)

HSP 1 Score: 327.791 bits (839), Expect = 4.385e-108
Identity = 165/413 (39.95%), Postives = 251/413 (60.77%), Query Frame = 0

Query:   53 SSAFFLKH---KAPSLNVAVVEGDPKYSKSSSSLSVGGVREQFSTPENIRLSQWSSHFMKNIDQYLSIDGEEPC-ISFFKSSYLFLATESGVDILKSNAEIQKNCGVDIKSVGSDEIHKYFEWVNTDGIAAANIYSGEKEGSFDGWCLLQAFKKKAEQIGVHYIKGDCQKIDVGTTVKGITVDCDGQAMN-----------------IECDSLVNAAGPWAGELMSKINL-----------HLPVVPRKRYVFAFDCPKGPGRAAPLTVDPTGVYFKPDGQTGTRYLCGCSPEEDEEPDISNLDVDYDYFESFLWPILAERYRGMEELKVCHSWAGYYDYNTLDQNCVIGPHPHIQNLYFINGFSGHGIQQSPAAGNAISELILEGKYVDIDLTRFQYERILNDRPLPEINVV 433
            S A++LK    +  ++ V VVE D  YS++S+ LSVGG+ +QFS PENI+LS +S+ F++NI++YL++    P  + F  S YL LA+E     ++SN ++Q+  G  +  +  D++   F W+NT+G+A A+ Y  E EG FD WCLLQ  ++K + +GV + +G+  +  V ++ + +T D     +                  +EC  ++NAAG W+ ++ +   +            LPV PRKRYV+ + CP+GPG   PL  D +G YF+ +G  G+ YL G SP E EEPD +NL+VD+D+F+  +WP LA R    E LKV  +WAGYYDYNT DQN V+GPHP + N+YF  GFSGHG+QQ+P  G A++E++L+G++  IDL+ F + R      + E N++
Sbjct:   77 SVAYWLKKLESRRGAIRVLVVERDHTYSQASTGLSVGGICQQFSLPENIQLSLFSASFLRNINEYLAVVDAPPLDLRFNPSGYLLLASEKDAAAMESNVKVQRQEGAKVSLMSPDQLRNKFPWINTEGVALAS-YGMEDEGWFDPWCLLQGLRRKVQSLGVLFCQGEVTRF-VSSSQRMLTTDDKAVVLKRIHEVHVKMDRSLEYQPVECAIVINAAGAWSAQIAALAGVGEGPPGTLQGTKLPVEPRKRYVYVWHCPQGPGLETPLVADTSGAYFRREG-LGSNYLGGRSPTEQEEPDPANLEVDHDFFQDKVWPHLALRVPAFETLKVQSAWAGYYDYNTFDQNGVVGPHPLVVNMYFATGFSGHGLQQAPGIGRAVAEMVLKGRFQTIDLSPFLFTRFYLGEKIQENNII 486

The following BLAST results are available for this feature:

BLAST of TCONS_00006735-protein vs. Swiss-Prot (Human)

BLAST of TCONS_00006735-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
FXRD1	4.385e-108	39.95	FAD-dependent oxidoreductase domain-containing pro...	[more]

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TCONS_00006735-protein (polypeptide) - C. hemisphaerica