TCONS_00006797-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00006797-protein
Unique NameTCONS_00006797-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length465

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00006797-protein ID=TCONS_00006797-protein|Name=TCONS_00006797-protein|organism=Clytia hemisphaerica|type=polypeptide|length=465bp
SDWTSWSSCENNQMNRTRFCNDPAPIPANYLTRCYGLDQQLKSSETQYCT
DCSGCVLQSHITWIDGGTTQYESVDENMPPLQYVHRVNTVKVCHSVQFRI
QGGDEHGQFFIDNTGRIYTSTLLDHETKSHYSLSISVYYDNDVNKIATPN
DPIVNITVNDMNEAPYFNTIHYQIHICYEPVFNESIDHVTALDQDANFTN
NVYTGNSTMDDVFYINETGHILKGHKDLRLVDADEFLIMVQAFDASDATL
ASTLVPVHIHWCDVNIPEFVQPLTRNFSIIENDESFVYQVQTTTADEHFY
IVEGNENDYFHLTEKDGNLTIKNPPDREINDFARLIVQAISLFGNGVKST
ANLTLNFHILDTNDNIPQITSINDPRIFYTNVTYINATFPAFNATDPDLG
NNGTLTYEITWNQLIFPSVSFLPTGQLRVNGQFNISMNMHIYVSVCDQGL
PPKCQSAYIGLRIDR
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_003799XLOC_003799Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00006797TCONS_00006797Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002126Cadherin
IPR015919Cadherin-like
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Vocabulary: Molecular Function
TermDefinition
GO:0005509calcium ion binding
Vocabulary: Biological Process
TermDefinition
GO:0007156homophilic cell adhesion via plasma membrane adhesion molecules
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0007156 homophilic cell adhesion via plasma membrane adhesion molecules
cellular_component GO:0016020 membrane
molecular_function GO:0005509 calcium ion binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002126CadherinPRINTSPR00205CADHERINcoord: 235..247
score: 24.47
coord: 315..341
score: 24.25
coord: 351..368
score: 40.92
coord: 167..196
score: 22.24
IPR002126CadherinSMARTSM00112CA_2coord: 290..367
e-value: 2.6E-4
score: 30.3
coord: 84..166
e-value: 1.4
score: 2.2
NoneNo IPR availableGENE3D2.60.40.60coord: 371..464
e-value: 1.5E-7
score: 31.3
NoneNo IPR availableGENE3D2.60.350.10coord: 66..173
e-value: 2.6E-13
score: 49.3
NoneNo IPR availableGENE3D2.60.40.60coord: 174..266
e-value: 2.3E-5
score: 24.4
NoneNo IPR availableGENE3D2.60.40.60coord: 267..370
e-value: 1.1E-12
score: 47.5
NoneNo IPR availablePROSITEPS50268CADHERIN_2coord: 73..167
score: 12.786
NoneNo IPR availablePROSITEPS50268CADHERIN_2coord: 277..369
score: 12.084
NoneNo IPR availableCDDcd11304Cadherin_repeatcoord: 392..459
e-value: 3.03435E-4
score: 38.0634
NoneNo IPR availableCDDcd11304Cadherin_repeatcoord: 276..365
e-value: 1.81578E-12
score: 62.3309
NoneNo IPR availableCDDcd11304Cadherin_repeatcoord: 73..163
e-value: 3.85963E-11
score: 58.4789
IPR015919Cadherin-likeSUPERFAMILY49313Cadherin-likecoord: 74..163
IPR015919Cadherin-likeSUPERFAMILY49313Cadherin-likecoord: 363..460
IPR015919Cadherin-likeSUPERFAMILY49313Cadherin-likecoord: 156..268
IPR015919Cadherin-likeSUPERFAMILY49313Cadherin-likecoord: 265..369

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00006797-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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