TCONS_00006929-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00006929-protein
Unique NameTCONS_00006929-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length168

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00006929-protein ID=TCONS_00006929-protein|Name=TCONS_00006929-protein|organism=Clytia hemisphaerica|type=polypeptide|length=168bp
MRRSKAPSQKFSPTQQQSTNARKHKKNVACSDDDSDEDYNPSDSDEECSR
RSSRRSTTKKCKTSVVALYNPKEFLSQYRKPLKEIDQEDGEEGNVSAHEA
LIKSLLSKPFKVPMKNFKGSNHGRSLGIRRVAHKLCLYDPFEEGALVLYH
PPEVTAHEKLSANKEEIL
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_003876XLOC_003876Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00006929TCONS_00006929Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013967Rad54_N
Vocabulary: Molecular Function
TermDefinition
GO:0016817hydrolase activity, acting on acid anhydrides
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0016817 hydrolase activity, acting on acid anhydrides
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013967Rad54, N-terminalPFAMPF08658Rad54_Ncoord: 5..151
e-value: 1.8E-7
score: 31.4
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..61

Blast
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BLAST of TCONS_00006929-protein vs. Swiss-Prot (Human)
Match: RAD54 (DNA repair and recombination protein RAD54-like OS=Homo sapiens GN=RAD54L PE=1 SV=2)

HSP 1 Score: 97.0561 bits (240), Expect = 5.306e-24
Identity = 61/167 (36.53%), Postives = 93/167 (55.69%), Query Frame = 0 
Query:    1 MRRSKAPSQKFSPTQQQSTNARKHKKNVACSDDDSDEDYNPSDSDEECSRRSSRRSTTKKCKTSVVALYNPKEFLSQYRKPLKEIDQEDGEEGNVSAHEALIKSLLSKPFKVPMKNFKGSNHGRSLGIRRVAHKLCLYDPFEEGALVLYHPPEVTAHEKLSANKEEI 167
            MRRS APSQ           A++  +  +C D    ED+ P        R+SS  +  ++C            FLS +RKPL ++  +     + S HEA I+S+LSKPFKVP+ N++G    R+LG++R   +  L+DP E+ ALVLY PP ++AH++L  +KE++
Sbjct:    1 MRRSLAPSQL----------AKRKPEGRSCDD----EDWQPGLVTPR-KRKSSSETQIQEC------------FLSPFRKPLSQLTNQP-PCLDSSQHEAFIRSILSKPFKVPIPNYQGPLGSRALGLKRAGVRRALHDPLEKDALVLYEPPPLSAHDQLKLDKEKL 139
The following BLAST results are available for this feature:
BLAST of TCONS_00006929-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
RAD545.306e-2436.53DNA repair and recombination protein RAD54-like OS... [more]
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