TCONS_00007010-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00007010-protein
Unique NameTCONS_00007010-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length143

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00007010-protein ID=TCONS_00007010-protein|Name=TCONS_00007010-protein|organism=Clytia hemisphaerica|type=polypeptide|length=143bp
MGKGGGKGNSSGGGGGAKGGKGGAKGGKGAKGGDDGETKSAKTIKGGITV
KVRHILCEKHGKCMEAMEQIKAGKKFNEVATQFSEDKARSGGDLGWMTRG
SMVGPFQDAAFALTPSTVDKPVYTDPPVKTKFGYHIIMIEGKK
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_003924XLOC_003924Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00007010TCONS_00007010Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000297PPIase_PpiC
Vocabulary: Molecular Function
TermDefinition
GO:0016853isomerase activity
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0016853 isomerase activity
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePFAMPF13616Rotamase_3coord: 49..142
e-value: 1.7E-18
score: 67.2
NoneNo IPR availableGENE3D3.10.50.40coord: 25..141
e-value: 6.2E-32
score: 110.1
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..44
NoneNo IPR availableSUPERFAMILY54534FKBP-likecoord: 50..142
IPR000297Peptidyl-prolyl cis-trans isomerase, PpiC-typePROSITEPS50198PPIC_PPIASE_2coord: 47..141
score: 19.436

Blast
[Close]
BLAST of TCONS_00007010-protein vs. Swiss-Prot (Human)
Match: PIN4 (Peptidyl-prolyl cis-trans isomerase NIMA-interacting 4 OS=Homo sapiens GN=PIN4 PE=1 SV=1)

HSP 1 Score: 173.326 bits (438), Expect = 8.457e-57
Identity = 79/98 (80.61%), Postives = 89/98 (90.82%), Query Frame = 0 
Query:   46 GGITVKVRHILCEKHGKCMEAMEQIKAGKKFNEVATQFSEDKARSGGDLGWMTRGSMVGPFQDAAFALTPSTVDKPVYTDPPVKTKFGYHIIMIEGKK 143
            GG  VKVRHILCEKHGK MEAME++K+G +FNEVA Q+SEDKAR GGDLGWMTRGSMVGPFQ+AAFAL  S +DKPV+TDPPVKTKFGYHIIM+EG+K
Sbjct:   34 GGNAVKVRHILCEKHGKIMEAMEKLKSGMRFNEVAAQYSEDKARQGGDLGWMTRGSMVGPFQEAAFALPVSGMDKPVFTDPPVKTKFGYHIIMVEGRK 131
The following BLAST results are available for this feature:
BLAST of TCONS_00007010-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
PIN48.457e-5780.61Peptidyl-prolyl cis-trans isomerase NIMA-interacti... [more]
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