TCONS_00007128-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00007128-protein
Unique NameTCONS_00007128-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length378

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00007128-protein ID=TCONS_00007128-protein|Name=TCONS_00007128-protein|organism=Clytia hemisphaerica|type=polypeptide|length=378bp
MKMETLPEEIIKLIFDYCKVETLKTIACCNKFLKELVTPHLWHTIFVHLP
IKEDEVVSKLDNLKHARALTFHENRKKDDENEDATIQNLTRVLNSCKSSR
VETIIIQCKRFYYHFFNENIIAILSTFKNVRNLNLRLHYQEMNEDVVLYI
LKLKNLRELLIPNVVLITKSFEKLAERNELQKLHINGTVNKTTKLIGQCT
NLKALTINSDRSGPGQNISPLSSLINLELLELTGFHLGRNTLHKFSSSLT
NLKHLKLAQICCLTDEDFMNIHQMTYLNSLDISQNSIDNKLTPLTLFYLS
QIKSLEKLRISMHTCLQNLDGKVSAGEEVMCLNRMQKLQRIEIIGVMPNV
GLIIDSILQDNKWLLQEGLEPSLFILSI
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_003996XLOC_003996Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00007128TCONS_00007128Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR032675L_dom-like
IPR001810F-box_dom
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D1.20.1280.50coord: 2..97
e-value: 8.0E-7
score: 28.9
NoneNo IPR availableSUPERFAMILY52047RNI-likecoord: 114..313
IPR032675Leucine-rich repeat domain, L domain-likeGENE3D3.80.10.10coord: 200..362
e-value: 5.4E-12
score: 44.7
IPR032675Leucine-rich repeat domain, L domain-likeGENE3D3.80.10.10coord: 98..199
e-value: 1.9E-4
score: 20.1
IPR001810F-box domainPROSITEPS50181FBOXcoord: 1..45
score: 9.391
IPR001810F-box domainSUPERFAMILY81383F-box domaincoord: 4..75

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00007128-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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