TCONS_00007290-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00007290-protein
Unique NameTCONS_00007290-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length497

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00007290-protein ID=TCONS_00007290-protein|Name=TCONS_00007290-protein|organism=Clytia hemisphaerica|type=polypeptide|length=497bp
MRRGGLLNLKGDPLTPGWPSTEGMFRMNESSIEGLPQIPVQPISDHIAKE
LLSKFTGVEAPNHWHTSFTDITNRIQSHRVVRLQVNTENVFKNITNVFGV
LEGDTEPDRLVIMGNHRDAWVYGAGDPSSGTACMMEVSRVLGQITNDVPG
WAPRRTLIFASWDAEEYGLAGSWEWLEEYATMMQANTVVYLNVDIGVSGN
HSIRAHATPSLSKSLFESAKQLKDPENDDKTTYTGVKFSNLYERWNAKLP
SDDFPNEPLVSMLTSGSDYSGFYMFYGIPAVDIRYEFDRTASENEAFDNY
PAYHTIYDNENYVKKFLDPDMKYHETVAEMLLLQLLKFSDDLLLPFDLSR
YALKIKTDWDIFKREFVEILTNNTISIDHLDSTIEQLLNTTLMFHHEAKK
LSKQDLNQVRRYNDQLMWFERSFVVPEGLKKDPAMRHSIFNSGSRSLFSR
NTFPSLSRTLYNIFIEKTDTWDDLRKEISILDNRLQNAILVLSEYGF
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_004092XLOC_004092Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00007290TCONS_00007290Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR007365TFR-like_dimer_dom
IPR007484Peptidase_M28
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007365Transferrin receptor-like, dimerisation domainGENE3D1.20.930.40coord: 346..495
e-value: 2.0E-26
score: 91.9
IPR007365Transferrin receptor-like, dimerisation domainPFAMPF04253TFR_dimercoord: 375..492
e-value: 1.4E-17
score: 63.8
IPR007365Transferrin receptor-like, dimerisation domainSUPERFAMILY47672Transferrin receptor-like dimerisation domaincoord: 345..494
NoneNo IPR availableGENE3D3.40.630.10coord: 31..345
e-value: 1.3E-58
score: 198.1
NoneNo IPR availableCDDcd08022M28_PSMA_likecoord: 48..346
e-value: 7.07778E-98
score: 298.737
NoneNo IPR availableSUPERFAMILY52025PA domaincoord: 4..98
NoneNo IPR availableSUPERFAMILY53187Zn-dependent exopeptidasescoord: 78..341
IPR007484Peptidase M28PFAMPF04389Peptidase_M28coord: 96..314
e-value: 3.3E-20
score: 72.5

Blast
[Close]
BLAST of TCONS_00007290-protein vs. Swiss-Prot (Human)
Match: FOLH1 (Glutamate carboxypeptidase 2 OS=Homo sapiens GN=FOLH1 PE=1 SV=1)

HSP 1 Score: 316.235 bits (809), Expect = 9.756e-100
Identity = 176/509 (34.58%), Postives = 271/509 (53.24%), Query Frame = 0 
Query:    1 MRRGGLLNL--KGDPLTPGWPSTEGMFRMNESSIEGLPQIPVQPISDHIAKELLSKFTGVEAPNH-WHTSFT-------DITNRIQSHRVVRLQVNTENVFKNITNVFGVLEGDTEPDRLVIMGNHRDAWVYGAGDPSSGTACMMEVSRVLGQITNDVPGWAPRRTLIFASWDAEEYGLAGSWEWLEEYATMMQANTVVYLNVDIGVSGNHSIRAHATPSLSKSLFESAKQLKDPENDDKTTYTGVKFSNLYERWNAKLPSDDFPNEPLVSMLTSGSDYSGFYMFYGIPAVDIRYEFDRTASENEAFDNYPAYHTIYDNENYVKKFLDPDMKYHETVAEMLLLQLLKFSDDLLLPFDLSRYALKIKTDWD---IFKREFVEILTNNTISIDHLDSTIEQLLNTTLMFHHEAKKLSKQDLNQVRRYNDQLMWFERSFVVPEGLKKDPAMRHSIFNSGSRSLFSRNTFPSLSRTLYNI--FIEKTDTWDDLRKEISILDNRLQNAILVLSE 494
            ++RG +LNL   GDPLTPG+P+ E  +R   +   GLP IPV PI  + A++LL K  G   P+  W  S           T    + +V ++ +++ N    I NV G L G  EPDR VI+G HRD+WV+G  DP SG A + E+ R  G +  +  GW PRRT++FASWDAEE+GL GS EW EE + ++Q   V Y+N D  + GN+++R   TP +   +    K+LK P+        G +  +LYE W  K PS +F   P +S L SG+D+  F+   GI +   RY  +    E   F  YP YH++Y+    V+KF DP  KYH TVA++    + + ++ ++LPFD   YA+ ++   D       +  + +   ++S D L S ++        F    +   K +   +R  NDQLM+ ER+F+ P GL   P  RH I+   S + ++  +FP +   L++I   ++ +  W +++++I +    +Q A   LSE
Sbjct:  253 VQRGNILNLNGAGDPLTPGYPANEYAYRRGIAEAVGLPSIPVHPIGYYDAQKLLEKMGGSAPPDSSWRGSLKVPYNVGPGFTGNFSTQKV-KMHIHSTNEVTRIYNVIGTLRGAVEPDRYVILGGHRDSWVFGGIDPQSGAAVVHEIVRSFGTLKKE--GWRPRRTILFASWDAEEFGLLGSTEWAEENSRLLQERGVAYINADSSIEGNYTLRVDCTPLMYSLVHNLTKELKSPDE-------GFEGKSLYESWTKKSPSPEFSGMPRISKLGSGNDFEVFFQRLGIASGRARYTKNW---ETNKFSGYPLYHSVYETYELVEKFYDPMFKYHLTVAQVRGGMVFELANSIVLPFDCRDYAVVLRKYADKIYSISMKHPQEMKTYSVSFDSLFSAVKNFTEIASKFSERLQDFDKSNPIVLRMMNDQLMFLERAFIDPLGLPDRPFYRHVIYAPSSHNKYAGESFPGIYDALFDIESKVDPSKAWGEVKRQIYVAAFTVQAAAETLSE 748
The following BLAST results are available for this feature:
BLAST of TCONS_00007290-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
FOLH19.756e-10034.58Glutamate carboxypeptidase 2 OS=Homo sapiens GN=FO... [more]
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