TCONS_00007477-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00007477-protein
Unique NameTCONS_00007477-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length773

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00007477-protein ID=TCONS_00007477-protein|Name=TCONS_00007477-protein|organism=Clytia hemisphaerica|type=polypeptide|length=773bp
MAVDPRFERLPEHEGPAFRTWQLIMQTTMGSVVQQQATGGHIQLSNVPKP
RSKPAPADDFIPLGSSKKENQIEENDEAPKIKKEKQAPKEAVADELFIPW
KTHDHYPEDPVGLHLEISDFHKYMKPTIEEEKMRQNVVDRISALIVHIWP
SAKVEVFGSFRTKLYLPTSDIDLAVFGKWEKLPLNTLKKELVNHGFADEE
TIKVLDKASVPIIKLTDKKSKIRVDISFNVESSIKSAELIKKYIEEFRIL
PSLFLIIKHFLVQRDLNEVFTGGISSYCLMLLTISFLQRHRKVDVRKTKN
VNLGVLLMEFLELYGRNFNYQRIAVKIKDDGCYANKEMLAKELGEGTFLP
LLCIEDPITHSCEIGKSSYGILRVKDAFEYGFNIIDRAIRNKSYFKVNPN
STYLSRIVSVAREVEEYRQWIRTSYKSFDFVPKTPVYIPSTPVTPQSIYP
IAIPNQFISTSNGRPPLLPTPPSPFSPRVNMITSPFSTYPPSTTYGFFGD
SNTVQQTIIIPTAGSTGNSDTTDLNQQQIPNLQQSQKLNQQPSQQNPEIV
TTPPPPVTQQIHYVVPANNGAYIQQTRPLTQQSFVSPSPSPSSPIKTMPP
NLAFGSLITSMAQQRRNNSKANTNYTNKRNTNSARNSQRNSPKTSPKLTN
RSFSVPNAVPGIAAVSVPQTTTDYSKQISRITGTESRIHYTADELRSLNP
GTTMVSNGNGKRKTEKEYRVPVERFDSSKFINKDSSIHKYVAPVPLKSSP
VASHMKRRDSLKDSAIVISSDGE
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_004216XLOC_004216Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00007477TCONS_00007477Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002934Polymerase_NTP_transf_dom
IPR002058PAP_assoc
Vocabulary: Molecular Function
TermDefinition
GO:0016779nucleotidyltransferase activity
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0016779 nucleotidyltransferase activity
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002934Polymerase, nucleotidyl transferase domainPFAMPF01909NTP_transf_2coord: 147..248
e-value: 2.7E-12
score: 46.7
NoneNo IPR availableGENE3D1.10.1410.10coord: 207..397
e-value: 1.7E-41
score: 141.3
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 535..557
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 749..773
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 581..655
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 43..86
NoneNo IPR availableCDDcd05402NT_PAP_TUTasecoord: 133..244
e-value: 1.08814E-33
score: 124.977
NoneNo IPR availableSUPERFAMILY81301Nucleotidyltransferasecoord: 107..245
NoneNo IPR availableSUPERFAMILY81631PAP/OAS1 substrate-binding domaincoord: 251..390
IPR002058PAP/25A-associatedPFAMPF03828PAP_assoccoord: 302..361
e-value: 1.3E-12
score: 47.6

Blast
[Close]
BLAST of TCONS_00007477-protein vs. Swiss-Prot (Human)
Match: PAPD5 (Non-canonical poly(A) RNA polymerase PAPD5 OS=Homo sapiens GN=PAPD5 PE=1 SV=2)

HSP 1 Score: 350.903 bits (899), Expect = 1.094e-111
Identity = 169/328 (51.52%), Postives = 232/328 (70.73%), Query Frame = 0 
Query:   99 PWKTHDHYPEDPVGLHLEISDFHKYMKPTIEEEKMRQNVVDRISALIVHIWPSAKVEVFGSFRTKLYLPTSDIDLAVFGKWEKLPLNTLKKELVNHGFADEETIKVLDKASVPIIKLTDKKSKIRVDISFNVESSIKSAELIKKYIEEFRILPSLFLIIKHFLVQRDLNEVFTGGISSYCLMLLTISFLQRHRKVDVRKTKNVNLGVLLMEFLELYGRNFNYQRIAVKIKDDGCYANKEMLAKELGEGTFLPLLCIEDPITHSCEIGKSSYGILRVKDAFEYGFNIIDRAIR-NKSYFKVNPNSTYLSRIVSVAREVEEYRQWIRTSY 425
            PWK  + Y +  VGLH EISDF++YM P  EEEKMR  VV+RI ++I  +WPSA V++FGSF+T LYLPTSDIDL VFGKWE LPL TL++ L  H  ADE+++KVLDKA+VPIIKLTD  ++++VDISFNV++ +++A+LIK + +++ +LP L L++K FL+QRDLNEVFTGGI SY L L+ +SFLQ H + D     N N GVLL+EF ELYGR+FNY +  ++IKD G Y  K+ + K + +G    +L IEDP+    ++G+SSYG ++VK AF+Y + ++  A+     Y+  N   + L RI+ V  EV  YR WI   +
Sbjct:  107 PWKRRN-YNQGVVGLHEEISDFYEYMSPRPEEEKMRMEVVNRIESVIKELWPSADVQIFGSFKTGLYLPTSDIDLVVFGKWENLPLWTLEEALRKHKVADEDSVKVLDKATVPIIKLTDSFTEVKVDISFNVQNGVRAADLIKDFTKKYPVLPYLVLVLKQFLLQRDLNEVFTGGIGSYSLFLMAVSFLQLHPREDA-CIPNTNYGVLLIEFFELYGRHFNYLKTGIRIKDGGSYVAKDEVQKNMLDGYRPSMLYIEDPLQPGNDVGRSSYGAMQVKQAFDYAYVVLSHAVSPIAKYYPNNETESILGRIIRVTDEVATYRDWISKQW 432
The following BLAST results are available for this feature:
BLAST of TCONS_00007477-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
PAPD51.094e-11151.52Non-canonical poly(A) RNA polymerase PAPD5 OS=Homo... [more]
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