TCONS_00007550-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00007550-protein
Unique NameTCONS_00007550-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length513

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00007550-protein ID=TCONS_00007550-protein|Name=TCONS_00007550-protein|organism=Clytia hemisphaerica|type=polypeptide|length=513bp
MEQDVPRAALAVMEIENILAASFGENGKRCYKVQWKESWVFEDHLFSCKP
LVEKFWKNQKQDPSTAITISQNTEPTTRGTKRAAKGGGGKKNMKVIVISN
KEKKDGEDVVQQTQHVDNEEAITNTDDIDGDWILDGLNQDDDSSKENDNS
WFVTAEMKKIRPTGAKYTLSCHICPNEEFEAVSTFRRHYITMHPGVKAFS
CDVCQKRFDRKENLMRHIRIHTGDRRYICNFCGKGYTDPSGLKKHVNAKH
ANEKKIFKCDICQDTFPNKVILDKHYVQHDASTDPALNTEPSDGEHIQHE
GRESGEDTLELHTDSEISAIQKSNLLETSMDQSEVVTDDETTTIEVLMEK
SPENLSSSTTNSVVPTTNILEATDIKDTEQPMQNVVKQLQQFVDEQVVQY
VQVTNTAEQTQSQPVTLNSPTLHHHQPKTFIFNDATAPDQQSHFVIPISA
PQLLINPAGGQNNLRQVLPAVSNHQQQIITVPLTPSSFVYTGPLTPHHPP
PQTSNDSLLSDGT
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_004270XLOC_004270Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00007550TCONS_00007550Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013087Znf_C2H2_type
IPR008598Di19_Zn_binding_dom
IPR016197Chromodomain-like
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0003676 nucleic acid binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013087Zinc finger C2H2-typeSMARTSM00355c2h2final6coord: 199..221
e-value: 2.4E-4
score: 30.5
coord: 227..250
e-value: 0.0026
score: 27.0
coord: 257..279
e-value: 0.022
score: 23.9
coord: 169..193
e-value: 6.5
score: 14.9
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 201..221
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 259..279
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 229..250
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 227..255
score: 12.279
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 199..226
score: 14.835
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 257..284
score: 9.162
IPR013087Zinc finger C2H2-typeSUPERFAMILY57667beta-beta-alpha zinc fingerscoord: 193..245
NoneNo IPR availablePFAMPF00096zf-C2H2coord: 199..221
e-value: 6.4E-6
score: 26.2
NoneNo IPR availableGENE3D3.30.160.60coord: 212..237
e-value: 1.6E-17
score: 63.1
coord: 238..265
e-value: 1.5E-10
score: 40.7
NoneNo IPR availableGENE3D2.10.69.10coord: 163..211
e-value: 2.8E-11
score: 43.0
NoneNo IPR availableGENE3D2.20.28.10coord: 266..306
e-value: 0.26
score: 11.1
NoneNo IPR availableGENE3D2.40.50.40coord: 11..65
e-value: 5.5E-6
score: 25.6
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 490..513
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 282..307
NoneNo IPR availableCDDcd00024CHROMOcoord: 14..57
e-value: 3.25125E-4
score: 37.6287
IPR008598Drought induced 19 protein type, zinc-binding domainPFAMPF05605zf-Di19coord: 227..269
e-value: 2.4E-6
score: 27.7
IPR016197Chromo domain-likeSUPERFAMILY54160Chromo domain-likecoord: 12..61

Blast
[Close]
BLAST of TCONS_00007550-protein vs. Swiss-Prot (Human)
Match: ZBT20 (Zinc finger and BTB domain-containing protein 20 OS=Homo sapiens GN=ZBTB20 PE=1 SV=3)

HSP 1 Score: 82.4185 bits (202), Expect = 1.511e-16
Identity = 45/129 (34.88%), Postives = 66/129 (51.16%), Query Frame = 0 
Query:  164 GAKYTLSCHICPNEEFEAVSTFRRHYITMHPGVKAFSCDVCQKRFDRKENLMRHIRIHTGDRRYICNFCGKGYTDPSGLKKHVNAKHANEKKIFKCDICQDTFPNKVILDKHYVQHDASTD-PALNTEP 291
            G K    C +C N+ F A   + +H   +H G K   C +C + F  K+ L++H+  HTG R Y C+ C K +T  S L  H+   H  EK  ++C IC+  F +K +L++H   H AS   P   T P
Sbjct:  573 GEKKPYECTLC-NKTFTAKQNYVKHMF-VHTGEKPHQCSICWRSFSLKDYLIKHMVTHTGVRAYQCSICNKRFTQKSSLNVHMRL-HRGEKS-YECYICKKKFSHKTLLERHVALHSASNGTPPAGTPP 697
The following BLAST results are available for this feature:
BLAST of TCONS_00007550-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
ZBT201.511e-1634.88Zinc finger and BTB domain-containing protein 20 O... [more]
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