TCONS_00007556-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00007556-protein
Unique NameTCONS_00007556-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length468

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00007556-protein ID=TCONS_00007556-protein|Name=TCONS_00007556-protein|organism=Clytia hemisphaerica|type=polypeptide|length=468bp
SKEVKSTKYIFTLKTYFEMGFSCPYCHQVYYNQQSLDQHLKEYLFYPCLT
CAEEFSSLRQLEQHCDAVIHRSPPVDPETRDEKLQLYLQEAFYKEKVIVT
RTDRRKARKLVQGLLGKIMEDVTEQPNGDLYSKKIQAAGSTSTQTKIIVA
DEFDFNVVLTQKFSRFKHHEELVDYDLVKHSFIKLDKHIRMERVWDDDEY
ASIVIPNGYTAPKHFNNSPWSIKNLSHNHQLIPRWVQEDLYAKIQNSLQE
EHYGAKIRLKCVPNGPAITMFVNHTDVDHEISIDLSACIETDLPVGIYGW
PRSGTLRVLSTPQIKKIEEAGIILVPKHERFWYISFSKAVTSLMQFIDGA
DECRRTCHKILKKDFKTWQSQTGSAGLKGISTYLFKHHLFWMNESKQHMG
KTYWKNRYIGDCYMDMLESLEKKCRARNLPNYFNTKENILANKDINVLNK
LAGYCKERRLQLLHIKMG
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_004273XLOC_004273Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00007556TCONS_00007556Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR024810Mab-21_dom
IPR013087Znf_C2H2_type
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0003676 nucleic acid binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR024810Mab-21 domainSMARTSM01265Mab_21_2coord: 140..461
e-value: 1.8E-23
score: 94.0
IPR024810Mab-21 domainPFAMPF03281Mab-21coord: 145..452
e-value: 5.1E-29
score: 101.4
IPR013087Zinc finger C2H2-typeSMARTSM00355c2h2final6coord: 46..70
e-value: 3.7
score: 16.5
coord: 21..41
e-value: 17.0
score: 11.3
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 48..70
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 46..75
score: 8.538
NoneNo IPR availableGENE3D2.40.155.10coord: 17..153
e-value: 2.9E-5
score: 23.7

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00007556-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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