TCONS_00007689-protein (polypeptide) - C. hemisphaerica

Overview


Name	TCONS_00007689-protein
Unique Name	TCONS_00007689-protein
Type	polypeptide
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	847

Sequence

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>TCONS_00007689-protein ID=TCONS_00007689-protein|Name=TCONS_00007689-protein|organism=Clytia hemisphaerica|type=polypeptide|length=847bp
MDVADLDLEDGLMVTPSEAYEFTVHLYGRSDSTSTKCVLQIHYHEKTLSL
LRHGQKVENYLFSSLRDVVGDDEVPRLKIRFDDFNQLDIETGTLEKKNEI
FTLLTQIIDQQYRSEDSKEDAVDPRSHTIKEGILDKNGHGLFASFMWQER
YVKLYPGRMDYHRVKATNHEGPALNQVRLTSNKCSIRAVDENTLILGTPN
RDYIFRMRKHAHVDPRTMLNDWRLAFERAIQKGSKEVSLVDKRRLQHENR
LPINRGKEDEVPQPCEVGKPSPANEETKFENAQNAAITQDDKSEASAISA
GNQQTAKIENDFTTNTKDAIGQALLSIATAKEPTSSQKALQSDVTPSPKQ
PIPTSEPSTTEPIHKKSSTEILKETLPEATKSEPQISASKPDASTSRTSS
QPTSIVPKPPPSPGIGSAPPPPPPGSGSAPPPPPPPPPPPGSSTASIVHL
PPKKDIIPNRKMKTLPWSKVSDAQINTSFWGNATDRTNQIDFQKLEKSFY
LKSSDTEKKGAQEHHESPKQEKKKSLLDPKKAQTIGILLKNPELELENVK
KRLSKFDVKKDGSLDGLTSEEIKALKICVPTDDERKLFHNKKENELVDVD
KLVFELTTIDPIVLQDMLANLLIIREIPEQLRGIEPPITNVINGYKCLRD
SKDFKKLLEYILSIGNYMNGGTKEGCAYGFRLSALLKLAEIKSADEKESV
LQFLVEELYHKDAEVFACYKEMGDLLQMRNIDDVKPELKGVETELVQLKG
LKASPGGFDEQFVEQTKEFINTQSKELLRLRQLWCSQVENLSSQLKKMFG
EFPSSNMKNFMEIVIRFLKKYRRMALEVEEKEQYMQKWNKEKANKGL

Run BLAST on NCBI

Gene-mRNA-Prot

This polypeptide comes from the following gene feature:


Feature Name	Unique Name	Species	Type
XLOC_004360	XLOC_004360	Clytia hemisphaerica	gene

This polypeptide derives from the following transcript feature(s):


Feature Name	Unique Name	Species	Type
TCONS_00007689	TCONS_00007689	Clytia hemisphaerica	transcript

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR015425	FH2_Formin
IPR011993	PH_dom-like
IPR001849	PH_domain

InterPro

Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 821..841
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 331..463
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 504..527
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 253..276
None	No IPR available	SUPERFAMILY	101447	Formin homology 2 domain (FH2 domain)	coord: 430..837
IPR015425	Formin, FH2 domain	SMART	SM00498	it6_source	coord: 452..836 e-value: 5.9E-21 score: 85.6
IPR015425	Formin, FH2 domain	PFAM	PF02181	FH2	coord: 453..821 e-value: 4.7E-60 score: 203.6
IPR015425	Formin, FH2 domain	PROSITE	PS51444	FH2	coord: 452..847 score: 41.795
IPR011993	PH domain-like	GENE3D	2.30.29.30		coord: 82..238 e-value: 6.6E-9 score: 35.1
IPR011993	PH domain-like	SUPERFAMILY	50729	PH domain-like	coord: 121..234
IPR001849	Pleckstrin homology domain	PROSITE	PS50003	PH_DOMAIN	coord: 127..231 score: 7.286

Blast

[Close]

BLAST of TCONS_00007689-protein vs. Swiss-Prot (Human)
Match: DAAM1 (Disheveled-associated activator of morphogenesis 1 OS=Homo sapiens GN=DAAM1 PE=1 SV=2)

HSP 1 Score: 102.834 bits (255), Expect = 3.080e-22
Identity = 105/399 (26.32%), Postives = 194/399 (48.62%), Query Frame = 0

Query:  437 P-------PPPGSSTASIVHLPPKKDII--PNRKMKTLPWSKVSDAQINTSFWGNATDRT--NQIDFQKLEKSF--------YLKSSDTEKKGA---QEHHESPKQEKKKSLLDPKKAQTIGILLKNPELELENVKKRLSKFDVKKDGSLDGLTSEEIKALKICVPTDDERKLF--HNKKENELVDVDKLVFELTTIDPIVLQDMLANLLIIREIPEQLRGIEPPITNVINGYKCLRDSKDFKKLLEYILSIGNYMNGGTKEGCAYGFRLSALLKLAEIKSA-DEKESVLQFLVEELYHKDAEVFACYKEMGDLLQM---------RNIDDVKPELKGVETELVQLKGLKASPGGFDEQFVEQTKEFINTQSKELLRLRQLWCSQVENLSSQLKKMFGE 801
            P       PPPG+       L  KK  I  P   +K+  WSK+ + ++  + W    D      +D + LE++F        +  +S++++K A    +   S  + K+ S++D ++AQ   ILL   +L  + +K+ +   D ++D     L  + ++ L   VP   +  L   H  + + +   D+ +FE++ I+    Q  L +L   ++  E++  ++P +  + +G + +  S   K+LLE +L+ GNYMN G + G AYGF++S+L K+A+ KS+ D+  ++L +L+  + +K   V    +E+ D+ Q          + I  ++  LK VETEL   K     PG   ++FV    +FI   S     +  L  ++ ++L ++  K FGE
Sbjct:  580 PPPLGAIMPPPGAPMG----LALKKKSIPQPTNALKSFNWSKLPENKLEGTVWTEIDDTKVFKILDLEDLERTFSAYQRQQDFFVNSNSKQKEADAIDDTLSSKLKVKELSVIDGRRAQNCNILLSRLKLSNDEIKRAILTMDEQED-----LPKDMLEQLLKFVPEKSDIDLLEEHKHELDRMAKADRFLFEMSRINH--YQQRLQSLYFKKKFAERVAEVKPKVEAIRSGSEEVFRSGALKQLLEVVLAFGNYMNKGQR-GNAYGFKISSLNKIADTKSSIDKNITLLHYLITIVENKYPSVLNLNEELRDIPQAAKVNMTELDKEISTLRSGLKAVETELEYQKSQPPQPG---DKFVSVVSQFITVASFSFSDVEDL-LAEAKDLFTKAVKHFGE 962

The following BLAST results are available for this feature:

BLAST of TCONS_00007689-protein vs. Swiss-Prot (Human)

BLAST of TCONS_00007689-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
DAAM1	3.080e-22	26.32	Disheveled-associated activator of morphogenesis 1...	[more]

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TCONS_00007689-protein (polypeptide) - C. hemisphaerica