Tripartite motif containing protein (polypeptide) - C. hemisphaerica

Overview
NameTripartite motif containing protein
Unique NameTCONS_00007896-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length445

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00007896-protein ID=TCONS_00007896-protein|Name=Tripartite motif containing protein|organism=Clytia hemisphaerica|type=polypeptide|length=445bp
MQTHRRTRKLSTRSQQLINTLYESGADSGLDSSGEESTHSSEEISELYFI
TDSTVNMRAFNELDTNIEQLRKEIIRACDNLVRAVEQRKEALLQHVENIR
NEKAENLKAEKDNLNYLKPSMLDMGSCLRFVVDEAREDTSLYNMIHEYGC
IDEGRASASKSGAKGIGLRFAIADEATQFELITRNNCGETSWVEQDQVDV
TIKKENIHQKCGVKNNCNGSYNVFYELHEPGLYEIHVKVNGCHVPDSPFR
CNVFEKHNVSFLDDTQDEWTFQNGEKSALFEKNEHQHTSKLYSKDNTSAR
AWKVRVNTACPKIKVKFGYSNHTKLIPDLTEEYFCKFDLNDLLGNDYSTS
IPNHHTYADSHYHKHNRRTKHGKTRERKQSTYHRSSLNFVIFQDTTEKLI
HVAAEGTEHEKTTSFKGDLQKLVPFIGIKHFCKNSNCPRPQLVFA
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_004464XLOC_004464Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00007896TCONS_00007896Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001298Filamin/ABP280_rpt
IPR017868Filamin/ABP280_repeat-like
IPR013783Ig-like_fold
IPR014756Ig_E-set
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 60..113
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 23..43
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 356..380
IPR001298Filamin/ABP280 repeatSMARTSM00557flmn_3coord: 157..256
e-value: 3.6E-11
score: 53.1
IPR017868Filamin/ABP280 repeat-likePFAMPF00630Filamincoord: 157..250
e-value: 7.7E-17
score: 61.9
IPR017868Filamin/ABP280 repeat-likePROSITEPS50194FILAMIN_REPEATcoord: 153..253
score: 18.815
IPR013783Immunoglobulin-like foldGENE3D2.60.40.10coord: 153..261
e-value: 1.4E-21
score: 76.1
IPR014756Immunoglobulin E-setSUPERFAMILY81296E set domainscoord: 157..254

Blast
The following BLAST results are available for this feature:
BLAST of Tripartite motif containing protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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