TCONS_00007921-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00007921-protein
Unique NameTCONS_00007921-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length403

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00007921-protein ID=TCONS_00007921-protein|Name=TCONS_00007921-protein|organism=Clytia hemisphaerica|type=polypeptide|length=403bp
MFRRKRLVFTFLPLLACLFVLWQMTTRSEDDPLMRRLNKGMAESLLLSEN
IQSFFPSKELFTANKNARNFKRRRKMRKRSIPSDEIFDKLYRDFLDCMLK
SQRSLALFLNDQYQKQFRRDFRRRPSVESPILEPECKADLDLVIVVTTRP
GNFLERTSIRYSWGRPGAYINRFLIKQKSFTYKTIFTLGRDQNNVIEDVV
SKENSRYRDILRLDYQDTYENLAKKTILTLKWVNEACAPRFVLKTDDDCY
VNLHNLSPWLLRLSPYVNYVGKKNDLMPVIRDPTHRNYVPFDLFSEEYYK
VYCSGGGYILRGTVLGNITSKAKEIPEIINEDAYLGMITNALDIIPYDDE
RFLPFIFGDINLRKRHMCDWGDKFLMHGASPRRQLLMHWQKLAMVKYSVL
CDL
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_004471XLOC_004471Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00007921TCONS_00007921Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002659Glyco_trans_31
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Vocabulary: Molecular Function
TermDefinition
GO:0008378galactosyltransferase activity
Vocabulary: Biological Process
TermDefinition
GO:0006486protein glycosylation
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006486 protein glycosylation
cellular_component GO:0016020 membrane
molecular_function GO:0008378 galactosyltransferase activity
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002659Glycosyl transferase, family 31PFAMPF01762Galactosyl_Tcoord: 156..348
e-value: 1.8E-35
score: 122.4

Blast
[Close]
BLAST of TCONS_00007921-protein vs. Swiss-Prot (Human)
Match: B3GT1 (Beta-1,3-galactosyltransferase 1 OS=Homo sapiens GN=B3GALT1 PE=1 SV=1)

HSP 1 Score: 108.997 bits (271), Expect = 9.514e-27
Identity = 77/246 (31.30%), Postives = 123/246 (50.00%), Query Frame = 0 
Query:  120 DFRRRP----SVESPILEP-ECKADLD-LVIVVTTRPGNFLERTSIRYSWGRPGAYINRFLIKQKSFTYKTIFTLGRDQNNVIEDVVSKENSRYRDILRLDYQDTYENLAKKTILTLKWVNEACA-PRFVLKTDDDCYVNLHNLSPWLLRLSP------YVNYVGKKNDLMPVIRDPTHRNYVPFDLFSEEYYKVYCSGGGYILRGTVLGNITSKAKEIPEIINEDAYLGMITNALDIIPYDDERF 352
            + R RP    S E  I EP +C+ ++  LVI+++T    F  R +IR +WG    +        K     T+F LG++ + V+  +V +E+  + DI+  D+ D+Y NL  KT++ ++WV   C+  ++V+KTD D +VN+ NL   LL+ S       +  YV         IRD   + Y+P DL+ +  Y  +CSG GYI    V   I   +     +  ED Y+G+    L I P+ +  F
Sbjct:   52 NIRTRPINPHSFEFLINEPNKCEKNIPFLVILISTTHKEFDARQAIRETWGDENNF--------KGIKIATLFLLGKNADPVLNQMVEQESQIFHDIIVEDFIDSYHNLTLKTLMGMRWVATFCSKAKYVMKTDSDIFVNMDNLIYKLLKPSTKPRRRYFTGYVINGGP----IRDVRSKWYMPRDLYPDSNYPPFCSGTGYIFSADVAELIYKTSLHTRLLHLEDVYVGLCLRKLGIHPFQNSGF 285
The following BLAST results are available for this feature:
BLAST of TCONS_00007921-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
B3GT19.514e-2731.30Beta-1,3-galactosyltransferase 1 OS=Homo sapiens G... [more]
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