TCONS_00008011-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00008011-protein
Unique NameTCONS_00008011-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1226

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00008011-protein ID=TCONS_00008011-protein|Name=TCONS_00008011-protein|organism=Clytia hemisphaerica|type=polypeptide|length=1226bp
MATDQFLSSIFPADEDEGSLASSRTELNFSNLQTRIIKNIVAKSELNRKQ
VLEPEERAVTDGRIGGETVLIDISSQCGTMNTGIERMELESQSNFSSVRA
NVCVCKGKWMYEVFLGSKGIMQLGWATVRCRFTNEEGVGDTADSYAYDGH
RVRKWNMATGKYGEEWMAGDIIGCLIDMDEGTISYSRNGHLMGAAFKDIK
RGSGHAYFPAVSLSYGEVIQMNFGATPFRYPVEGFRPLQDKPDVDLMKAE
QLVASFNRLLPAPDRKPNIPEPLTAKQDSLTLLTVSHIFEQLGPMMMEPT
CPYIVETYFLPMLLDSCNAEAPFDVQPGIKRILEMIWVCLEDFEIQPLMD
SLIWALVKSYWHGPVNPDYIKQLKLLIVALSLMRHDQTCKLWMSGPLFNK
FPFLLHIRPPDDKGIKSAFPQVWWEGIQDSPSQPPPTSTTVSTPDAPDSI
EEATGAVEHDETSTPMMLVDEQRESYLNSCMLIKGRVTVLEGLQVEMCKI
LMQMDESNSKRDPRPTRIILSEKLRKILKDLHIASSSLQPVQACSGPVMT
CFLHRLIKAFRYHWDLWAKETPGAVGVEDVYLPHNVFYEESVSYFDLARV
GGILSHLKKTHRDELKTARASPVSRLGNLSFLENTNTPSSSSSMSATSTE
NMALDKSLIEILDSIILMYNTSVHRQLSKVHGVTETMREHSKALNDTIKK
INRCPPDRTDVLRELERAKAVFTKEATEVARHMGWVKSVIFSQEKQEDLH
WLLRVVLRTIKKSHSAGKLYVFLPEFYIENGIYLFQALWNYFLPLTRNSS
TEGFEETLSEMASFLATSLCDEKIVNPDVCDTIIQGVATFVCYPQTLNAI
ETINTNVKEQLMRCLMSAYDKRTWVHTTWILVRFWRGDGFGFRHATSPDL
IPFGISDQAGTIRAFTQRPCPSKVYQQLMRALCLDQETLSNNFLNGVLNQ
LNWAFSEFVGILQEIQQATARLDGQLPETRQLRTCGICFDLTVGLLRVLE
MVCSIVPEVFTDFSRPSAELTLTRLFQAVIQILNRVTASYKLFETLSRLH
ATDIERQDRYAVLAAVAGVLVTLLHRAPEQSKNKTVAKLLDEPSFQLESV
AFLAGNPGTDINGAHSSTPMFSFEKFKEVSEDECKEIDALLQYLSEEHTL
VKMKKQESIDAEAICTICYAWPQNVTFDPCGHSSCKPCITRHLMNSKDCF
FCKEPVVKIKENNPPISDNDEDTTDQ
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_004514XLOC_004514Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00008011TCONS_00008011Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003877SPRY_dom
IPR001841Znf_RING
IPR001870B30.2/SPRY
IPR013320ConA-like_dom
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003877SPRY domainSMARTSM00449SPRY_3coord: 106..227
e-value: 6.7E-33
score: 125.3
IPR003877SPRY domainPFAMPF00622SPRYcoord: 108..225
e-value: 8.1E-25
score: 87.2
IPR001841Zinc finger, RING-typeSMARTSM00184ring_2coord: 1165..1202
e-value: 0.0021
score: 27.3
IPR001841Zinc finger, RING-typePROSITEPS50089ZF_RING_2coord: 1165..1203
score: 9.435
IPR001841Zinc finger, RING-typeCDDcd00162RINGcoord: 1165..1206
e-value: 5.19358E-7
score: 47.4404
NoneNo IPR availablePFAMPF13920zf-C3HC4_3coord: 1163..1208
e-value: 9.3E-9
score: 34.9
NoneNo IPR availableGENE3D1.10.1170.10coord: 1072..1211
e-value: 9.3E-11
score: 41.7
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 428..449
NoneNo IPR availableCDDcd12882SPRY_RNF123coord: 97..224
e-value: 4.30319E-83
score: 266.087
NoneNo IPR availableSUPERFAMILY57850RING/U-boxcoord: 1154..1215
IPR001870B30.2/SPRY domainPROSITEPS50188B302_SPRYcoord: 38..228
score: 18.389
IPR013320Concanavalin A-like lectin/glucanase domainSUPERFAMILY49899Concanavalin A-like lectins/glucanasescoord: 91..239

Blast
[Close]
BLAST of TCONS_00008011-protein vs. Swiss-Prot (Human)
Match: RN123 (E3 ubiquitin-protein ligase RNF123 OS=Homo sapiens GN=RNF123 PE=1 SV=1)

HSP 1 Score: 499.59 bits (1285), Expect = 2.793e-155
Identity = 239/561 (42.60%), Postives = 354/561 (63.10%), Query Frame = 0 
Query:  655 DKSLIEILDSIILMYNTSVHRQLSKVHGVTETMREHSKALNDTIKKINRCPPDRTDVLRELERAKAVFTKEATEVARHMGWVKSVIFSQEKQEDLHWLLRVVLRTIKKSHSAGKLYVFLPEFYIENGIYLFQALWNYFLPLTRNSSTEGFEETLSEMASFLATSLCDEKIVNPDVCDTIIQGVATFVCYPQTLNAIETINTNVKEQLMRCLMSAYDKRTWVHTTWILVRFWRGDGFGFRHATSPDLIPFGISDQAGTIRAFTQRPCPSKVYQQLMRALCLDQETLSNNFLNGVLNQLNWAFSEFVGILQEIQQATARLDGQLPETRQLRTCGICFDLTVGLLRVLEMVCSIVPEVFTDFSRPSAELTLTRLFQAVIQILNRVTASYKLFETLSRLHATDIERQDRYAVLAAVAGVLVTLLHRAPEQSKNKTVAKLLDEPSFQLESVAFLAGNPGTDINGAHSSTP---MFSFEKFKE-VSEDECKEIDALLQYLSEEHTLVKMKKQESIDAEAICTICYAWPQNVTFDPCGHSSCKPCITRHLMNSKDCFFCKEPVVKIKE 1211
            + SL+E+LD  ++MYN SVH+QL K+ GV++ + E++ AL DT  K+ RCP  R D+L EL +++ VF+++   ++R + WV + ++SQEK  D++WLLRV LRTI+     G L+ F+PEFY+   I  + AL NYF P+       G+EETL+ +A+ LA    D +IV  D+ D+++Q +A++VCYP +L A+E I    +  ++R L++ Y++R W  T WILVR WRG GFG+R+   P L+   + D    + +  Q+PCPS + QQ M  L      ++ +FLN VLNQLNWAFSEF+G++QEIQQA  RL+    ++RQL+ C  CFDL+V LLRVLEM  ++VPE+F D++RP++E+ L RL Q + Q+LNRVTA   LF+ +  L    +E  D Y +L AV G+LV LL R P   + +  + LL +P FQL S+ +L G P     G     P    FS + + + +S DE  +++ +L +L+            + + E +C ICYA P +  F PCGH SCK CI +HLMN+KDCFFCK  +V +++
Sbjct:  744 ENSLLEVLDGAVMMYNLSVHQQLGKMVGVSDDVNEYAMALRDTEDKLRRCPKRRKDILAELTKSQKVFSEKLDHLSRRLAWVHATVYSQEKMLDIYWLLRVCLRTIEHGDRTGSLFAFMPEFYLSVAINSYSALKNYFGPVHSMEELPGYEETLTRLAAILAKHFADARIVGTDIRDSLMQALASYVCYPHSLRAVERIPEEQRIAMVRNLLAPYEQRPWAQTNWILVRLWRGCGFGYRYTRLPHLLKTKLED--ANLPSL-QKPCPSTLLQQHMADLLQQGPDVAPSFLNSVLNQLNWAFSEFIGMIQEIQQAAERLERNFVDSRQLKVCATCFDLSVSLLRVLEMTITLVPEIFLDWTRPTSEMLLRRLAQLLNQVLNRVTAERNLFDRVVTLRLPGLESVDHYPILVAVTGILVQLLVRGPASEREQATSVLLADPCFQLRSICYLLGQPEPPAPGTALPAPDRKRFSLQSYADYISADELAQVEQMLAHLTSASAQAAAASLPTSE-EDLCPICYAHPISAVFQPCGHKSCKACINQHLMNNKDCFFCKTTIVSVED 1300

HSP 2 Score: 413.305 bits (1061), Expect = 1.314e-123
Identity = 225/628 (35.83%), Postives = 347/628 (55.25%), Query Frame = 0 
Query:    4 DQFLSSIFPADEDEGSLASSRTELNFSNLQTRIIKNIVAKSELNRKQVLEPEERAVTDGRIGGETVLIDISSQCGTMNTGIERMELE-SQSNFSSVRANVCVCKGKWMYEVFLGSKGIMQLGWATVRCRFTNEEGVGDTADSYAYDGHRVRKWNMATGKYGEEWMAGDIIGCLIDMDEGTISYSRNGHLMGAAFKDIKRGSGHAYFPAVSLSYGEVIQMNFGATPFRYPVEGFRPLQDKPDVDLMKAEQLVASFNRLLPAPDRKPNIPEPLTAKQDS--------LTLLTVSHIFEQLGPMMMEPTCPYIVETYFLPMLLDSCNAEAPFDVQPGIKRILEMIWVCLEDFEIQPLMDSLIWALVKSYWHGPVNPDYIKQLKLLIVALSLMRHDQTCKLWMSGPLFN--KFPFLLHIRPP---DDKGIKSAFPQVWWEGIQDSPSQPPPTSTTVSTPDAPDSIEEATGAVEHDETSTPMMLVDEQRESYLNSCMLIKGRVTVLEGLQVEMCKILMQMDESNSKRDPRPTRIILSEKLRKILKDLHIASSSLQPVQACSGPVMTCFLHRLIKAFRYHWDLWAKETPGAVGVEDVYLPHNVFYEESVSYFDLARVGGILSHLKKTHRDELKT 617
            + +L+ IF + E     A+SR  LNF NL   + + +   +E       E E +   +GR+G  TV++D +     +    + +      SNF ++R+  CV KGKW+YEV + S+G+MQ+GW T+ CRF  EEGVGDT +SYAYDG+RVRKWN+ T  YG+ W AGDI+ CLID+D+GT+S+  NG  +G AF+++ RG G AYFPA+SLS+ E +  NFG+ P RYPV G+RPLQD P  DL++A++L+  F  +L   +  P +   L  K+ S          LLT++HIF    P++ +    Y+VE   +  LL       P   Q  + ++L+++W+ +ED+E+Q  +  L+ +L++ Y   P+ PD   Q+  L + ++++RH+++ K  +S  LF+  +     +I+ P   ++ G++   P  WW          P  S+            E   + E  E +    L   +R +Y   C  ++ R+ V+E LQV++ K+L+   + N       +R I   K RK L++   AS        C    M CFLHRLI A RY+WD +    P A   E+ Y+P  VFY   V YFDL R+GG+LSHL+KT +D+L +
Sbjct:   36 NDYLNRIFSSSEHAPPAATSRKPLNFQNLPEHLDQLLQVDNE-------EEESQGQVEGRLGPSTVVLDHTGGFEGLLLVDDDLLGVIGHSNFGTIRSTTCVYKGKWLYEVLISSQGLMQIGWCTISCRFNQEEGVGDTHNSYAYDGNRVRKWNVTTTNYGKAWAAGDIVSCLIDLDDGTLSFCLNGVSLGTAFENLSRGLGMAYFPAISLSFKESVAFNFGSRPLRYPVAGYRPLQDPPSADLVRAQRLLGCFRAVLSV-ELDP-VEGRLLDKESSKWRLRGQPTVLLTLAHIFHHFAPLLRK---VYLVEAVLMSFLLGIVEKGTPTQAQSVVHQVLDLLWLFMEDYEVQDCLKQLMMSLLRLYRFSPIVPDLGLQIHYLRLTIAILRHEKSRKFLLSNVLFDVLRSVVFFYIKSPLRVEEAGLQELIPTTWW----------PHCSS-----------REGKESTEMKEETAEERL---RRRAYERGCQRLRKRIEVVEELQVQILKLLLDNKDDNGG---EASRYIFLTKFRKFLQE--NASGRGNMPMLCPPEYMVCFLHRLISALRYYWDEYKASNPHASFSEEAYIPPQVFYNGKVDYFDLQRLGGLLSHLRKTLKDDLAS 622
The following BLAST results are available for this feature:
BLAST of TCONS_00008011-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
RN1232.793e-15542.60E3 ubiquitin-protein ligase RNF123 OS=Homo sapiens... [more]
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