TCONS_00008282-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00008282-protein
Unique NameTCONS_00008282-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length423

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00008282-protein ID=TCONS_00008282-protein|Name=TCONS_00008282-protein|organism=Clytia hemisphaerica|type=polypeptide|length=423bp
MMRIMQTQMIYGAFSKEDLVYPEIQIKKLFAAPFERALTERSKSKEHLRL
QSKIFVLKYSLTPFITSYEEEWEDRLTDKKVRAWRLISCYGETNLDTLHD
RILGPAMGWCRHFHTYKYIVPTNGACFGPGTSEAIDKMHAMTSYTLDSSK
YQLAHLLREPGQRLVYIYDLGDTWTHNLELVQVANRGDLLEMPCDDQVQN
ALIKEYNGELPKIKGVQLFAGELNCAPENSDGCGGMGNYGHLLKKGKKHI
SPEATRSPNWKDHKIKNAFKFDLDAHRKRLAEAIAGKSSAKTGQKICNMM
LQPDSHRFLNQQTRPGERVHEKCVGSLKTGCVPMSETIKIRPDKENEAVC
AACGRQPNVQAGFKPLLRCGSCKAAWYCGKSCQHSDWKNHKDKCVKMRKE
RKEYKKEVSSCDDQKVLAARCSR
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_004653XLOC_004653Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00008282TCONS_00008282Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR012912Plasmid_pRiA4b_Orf3
IPR002893Znf_MYND
IPR024047MM3350-like_dom
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 387..407
NoneNo IPR availableGENE3D3.90.1410.10coord: 308..417
e-value: 1.4E-4
score: 20.9
NoneNo IPR availableSUPERFAMILY144232HIT/MYND zinc finger-likecoord: 348..399
IPR012912Plasmid pRiA4b, Orf3PFAMPF07929PRiA4_ORF3coord: 76..193
e-value: 3.9E-15
score: 55.9
IPR002893Zinc finger, MYND-typePFAMPF01753zf-MYNDcoord: 350..394
e-value: 4.8E-10
score: 39.3
IPR002893Zinc finger, MYND-typePROSITEPS01360ZF_MYND_1coord: 350..394
IPR002893Zinc finger, MYND-typePROSITEPS50865ZF_MYND_2coord: 350..394
score: 12.104
IPR024047Protein MM3350-like domainGENE3D3.10.290.30coord: 73..277
e-value: 1.8E-18
score: 66.2
IPR024047Protein MM3350-like domainSUPERFAMILY159941MM3350-likecoord: 77..262

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00008282-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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