TCONS_00008289-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00008289-protein
Unique NameTCONS_00008289-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length282

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00008289-protein ID=TCONS_00008289-protein|Name=TCONS_00008289-protein|organism=Clytia hemisphaerica|type=polypeptide|length=282bp
MKIAIEGCAHGELNKIYESIQYIQGREKIKIDLLICCGDFQSVRNKDDML
SMAVPPKYREMKDFPDYYSDEMKPTEFDVQKFLEQEPDLSLYPFVQSPPG
SNPQTEEFCERFGIPNPCQFTPKSQASSSTIAATRKLNIPKPKLNLPKPM
KDDFEDIQQPKENKSVTSRQSDDDFDDLINPNNISSNPDEIDLSEKESDS
SSDSDSDSESSKISKAELTNKNLSSLPSFIETPVKQTAEKRSSSDSAGDS
SFTDSSVSDTTSIKKPKLIRRNQNLYTPSKDE
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_004658XLOC_004658Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00008289TCONS_00008289Clytia hemisphaericatranscript
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 119..282

Blast
[Close]
BLAST of TCONS_00008289-protein vs. Swiss-Prot (Human)
Match: DBR1 (Lariat debranching enzyme OS=Homo sapiens GN=DBR1 PE=1 SV=2)

HSP 1 Score: 99.7525 bits (247), Expect = 1.306e-23
Identity = 41/73 (56.16%), Postives = 54/73 (73.97%), Query Frame = 0 
Query:    1 MKIAIEGCAHGELNKIYESIQYIQGREKIKIDLLICCGDFQSVRNKDDMLSMAVPPKYREMKDFPDYYSDEMK 73
            M++A+ GC HGEL+KIYE++   + R    +DLL+CCGDFQ+VRN+ D+  MAVPPKYR M+ F  YYS E K
Sbjct:    1 MRVAVAGCCHGELDKIYETLALAERRGPGPVDLLLCCGDFQAVRNEADLRCMAVPPKYRHMQTFYRYYSGEKK 73
The following BLAST results are available for this feature:
BLAST of TCONS_00008289-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
DBR11.306e-2356.16Lariat debranching enzyme OS=Homo sapiens GN=DBR1 ... [more]
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