TCONS_00008308-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00008308-protein
Unique NameTCONS_00008308-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length460

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00008308-protein ID=TCONS_00008308-protein|Name=TCONS_00008308-protein|organism=Clytia hemisphaerica|type=polypeptide|length=460bp
MSFIFDSFVVFGSELLYFAFGWIFFMRKLFKNYEVRHVVVQLIFAVTFSF
SCMMFELVIFEILGYLDPSSRLFHWKLLIYSMLLVLIFLIPLYIGYFLVL
NLQWVPRGLKKIVALIYWFAFLYVFWKLRNPFPILSAKHGIFSIEQGISR
VGVIGVTLMAILSGFGAVNCPYTYMSYFMRHVTDADIATVERRLMQTMEL
IIAKKKRIALAKRKRFDNQKKNNSKSLWSVFSGMASSSNEENTTLLETEV
QSMEELSRQLYVEVIDLHNTKQRMILSKTLQGRYFDFMGHIFSLYCMWKI
FISSVNIIFDRVGKKDPITKGFEILFMFLTIDVDVQFWSQQLSFFLVGIL
IVTSIRGLLITLTKFFYALSSHKSSNIIVLVLAEIMGMYFISSVLLMRMN
MPPKYREIVTVVLGDLQFHFYHRWFDVIFLVSALASMGFLYVAHKQAPEK
QIHGYSANAS
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_004665XLOC_004665Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00008308TCONS_00008308Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR025969ABA_GPCR_dom
IPR022535Golgi_pH-regulator_cons_dom
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0016020 membrane
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR025969Abscisic acid G-protein coupled receptor-like domainPFAMPF12430ABA_GPCRcoord: 277..445
e-value: 1.2E-40
score: 139.1
IPR022535Golgi pH regulator, conserved domainPFAMPF12537GPHR_Ncoord: 141..208
e-value: 8.3E-29
score: 99.4

Blast
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BLAST of TCONS_00008308-protein vs. Swiss-Prot (Human)
Match: GPHRB (Golgi pH regulator B OS=Homo sapiens GN=GPR89B PE=1 SV=1)

HSP 1 Score: 583.178 bits (1502), Expect = 0.000e+0
Identity = 286/454 (63.00%), Postives = 377/454 (83.04%), Query Frame = 0 
Query:    1 MSFIFDSFVVFGSELLYFAFGWIFFMRKLFKNYEVRHVVVQLIFAVTFSFSCMMFELVIFEILGYLDPSSRLFHWKLLIYSMLLVLIFLIPLYIGYFLVLNLQWVPRGLKKIVALIYWFAFLYVFWKLRNPFPILSAKHGIFSIEQGISRVGVIGVTLMAILSGFGAVNCPYTYMSYFMRHVTDADIATVERRLMQTMELIIAKKKRIALAKRKRFDNQKKNNSKS-LWSVFSGMASS-SNEENTTLLETEVQSMEELSRQLYVEVIDLHNTKQRMILSKTLQGRYFDFMGHIFSLYCMWKIFISSVNIIFDRVGKKDPITKGFEILFMFLTIDVDVQFWSQQLSFFLVGILIVTSIRGLLITLTKFFYALSSHKSSNIIVLVLAEIMGMYFISSVLLMRMNMPPKYREIVTVVLGDLQFHFYHRWFDVIFLVSALASMGFLYVAHKQAPEKQI 452
            MSF+ DS ++  S++L+F FGW+FFMR+LFK+YE+R  VVQ+IF+VTF+FSC MFEL+IFEILG L+ SSR FHWK+ +  +LL+L+F++P YIGYF+V N++ + +  + + + + W  F+Y FWKL +PFPILS KHGI SIEQ ISRVGVIGVTLMA+LSGFGAVNCPYTYMSYF+R+VTD DI  +ERRL+QTM++II+KKKR+A+A+R  F   + +N  S  W +   + +S S  EN TL++ EV ++EELSRQL++E  DL+ TK+R+  SKT +G+YF+F+G+ FS+YC+WKIF++++NI+FDRVGK DP+T+G EI   +L I  DV+FWSQ +SF LVGI+IVTSIRGLLITLTKFFYA+SS KSSN+IVL+LA+IMGMYF+SSVLL+RM+MP +YR I+T VLG+LQF+FYHRWFDVIFLVSAL+S+ FLY+AHKQAPEKQ+
Sbjct:    1 MSFLIDSSIMITSQILFFGFGWLFFMRQLFKDYEIRQYVVQVIFSVTFAFSCTMFELIIFEILGVLNSSSRYFHWKMNLCVILLILVFMVPFYIGYFIVSNIRLLHKQ-RLLFSCLLWLTFMYFFWKLGDPFPILSPKHGILSIEQLISRVGVIGVTLMALLSGFGAVNCPYTYMSYFLRNVTDTDILALERRLLQTMDMIISKKKRMAMARRTMFQKGEVHNKPSGFWGMIKSVTTSASGSENLTLIQQEVDALEELSRQLFLETADLYATKERIEYSKTFKGKYFNFLGYFFSIYCVWKIFMATINIVFDRVGKTDPVTRGIEITVNYLGIQFDVKFWSQHISFILVGIIIVTSIRGLLITLTKFFYAISSSKSSNVIVLLLAQIMGMYFVSSVLLIRMSMPLEYRTIITEVLGELQFNFYHRWFDVIFLVSALSSILFLYLAHKQAPEKQM 453
The following BLAST results are available for this feature:
BLAST of TCONS_00008308-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
GPHRB0.000e+063.00Golgi pH regulator B OS=Homo sapiens GN=GPR89B PE=... [more]
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