TCONS_00008379-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00008379-protein
Unique NameTCONS_00008379-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length170

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00008379-protein ID=TCONS_00008379-protein|Name=TCONS_00008379-protein|organism=Clytia hemisphaerica|type=polypeptide|length=170bp
MEHRHKGFGFTAETKRAIDSKYDIESEREALEWIDAVLGGNSGLKGVTGK
DNVQQALANGIILCNLMNAINPGAVKKVHPENANKFKHQENVHNFLVGSE
AYGCHRGDIFQTVDLTEDRNMPAVIKGIHTLGRTAQKNNFSGPTIGPKVS
TPNKREFSEEQMRHGRVHGI
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_004707XLOC_004707Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00008379TCONS_00008379Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003096SM22_calponin
IPR001715CH-domain
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003096Smooth muscle protein/calponinPRINTSPR00888SM22CALPONINcoord: 3..17
score: 23.53
coord: 53..68
score: 48.9
coord: 103..118
score: 48.53
coord: 87..103
score: 39.79
coord: 22..35
score: 45.38
IPR001715Calponin homology domainSMARTSM00033ch_5coord: 26..131
e-value: 5.6E-17
score: 72.4
IPR001715Calponin homology domainGENE3D1.10.418.10coord: 15..168
e-value: 6.2E-28
score: 96.8
IPR001715Calponin homology domainPFAMPF00307CHcoord: 25..136
e-value: 4.6E-20
score: 71.7
IPR001715Calponin homology domainPROSITEPS50021CHcoord: 24..135
score: 14.995
IPR001715Calponin homology domainCDDcd00014CHcoord: 25..136
e-value: 5.61495E-23
score: 87.7515
IPR001715Calponin homology domainSUPERFAMILY47576Calponin-homology domain, CH-domaincoord: 17..166
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 135..170

Blast
[Close]
BLAST of TCONS_00008379-protein vs. Swiss-Prot (Human)
Match: TAGL2 (Transgelin-2 OS=Homo sapiens GN=TAGLN2 PE=1 SV=3)

HSP 1 Score: 103.219 bits (256), Expect = 4.420e-28
Identity = 61/173 (35.26%), Postives = 92/173 (53.18%), Query Frame = 0 
Query:    1 MEHRHKGFGFTAETKRAIDSKYDIESEREALEWIDAVLGGNSGLKGVTGKDNVQQALANGIILCNLMNAINP---GAVKKVHPENANKFKHQENVHNFLVGSEAYGCHRGDIFQTVDLTEDRNMPAVIKGIHTLGRTAQKNN---FSG-PTIGPKVSTPNKREFSEEQMRHGR 166
            M +R   +G + E ++ I+ +YD + E+  ++WI      + G +   G++N Q  L +G +LC L+NA+ P     VKK+       FK  E +  FL  +E YG +  DIFQTVDL E +NM  V + +  LG  A   +   FSG P   PK S  N R FS+ Q++ G+
Sbjct:    1 MANRGPAYGLSREVQQKIEKQYDADLEQILIQWITTQCRKDVG-RPQPGRENFQNWLKDGTVLCELINALYPEGQAPVKKIQASTM-AFKQMEQISQFLQAAERYGINTTDIFQTVDLWEGKNMACVQRTLMNLGGLAVARDDGLFSGDPNWFPKKSKENPRNFSDNQLQEGK 171
The following BLAST results are available for this feature:
BLAST of TCONS_00008379-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
TAGL24.420e-2835.26Transgelin-2 OS=Homo sapiens GN=TAGLN2 PE=1 SV=3[more]
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