TCONS_00008411-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00008411-protein
Unique NameTCONS_00008411-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length427

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00008411-protein ID=TCONS_00008411-protein|Name=TCONS_00008411-protein|organism=Clytia hemisphaerica|type=polypeptide|length=427bp
MDDDQKYKLPSIDEERENFLYSPFPSEKSINPKHWDSKLNFWSKEVVESC
NIQDEICVDCRRLQEVFKSERTARSPRGLQIVVSSLYQSGKLILKTDVTD
LSPDLTWGQWGVSVSYKTTSWLWRKYVSGINESTEFVLKELLEELSEELL
ITHYKSVQYEKTDYVVPWNVLKTYKLKNKVISEDTLICLVGHLKNQGKCK
IGISEDNEKIVKFKQKSQSKVDPVTSFDFETVKLKRAIAKLTLDSKSIEK
DLQQLKKHAQTLVKTNDRIQAKKVLAQRHKLEKKLRTNQNALFTMKDHLG
MVQETETTKLITDAFNSSATLLNQTYKKQGLTVEHIESVIDKAAEANEMA
REVSDALSGGLKQLEDEEFDMDELERELEQLDVTQGDESTAAFGLPQVPN
HSPTKTSTPTTAATKTKKPLRTTQMAS
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_004715XLOC_004715Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00008411TCONS_00008411Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR005024Snf7_fam
Vocabulary: Biological Process
TermDefinition
GO:0007034vacuolar transport
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0007034 vacuolar transport
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 357..384
NoneNo IPR availableCOILSCoilCoilcoord: 238..272
NoneNo IPR availableGENE3D1.10.1660.10coord: 320..398
e-value: 0.0063
score: 16.0
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 382..427
IPR005024Snf7 familyPFAMPF03357Snf7coord: 232..401
e-value: 7.8E-17
score: 61.3

Blast
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BLAST of TCONS_00008411-protein vs. Swiss-Prot (Human)
Match: CHMP7 (Charged multivesicular body protein 7 OS=Homo sapiens GN=CHMP7 PE=1 SV=1)

HSP 1 Score: 133.265 bits (334), Expect = 1.823e-34
Identity = 113/400 (28.25%), Postives = 191/400 (47.75%), Query Frame = 0 
Query:   13 DEERENFLYSPFPSEKSINPKHWDSKLNFWSKEVVESCNIQDEICVDCRRLQEVFKSERTARSPRGLQIVVSSLYQSGKLILKTDVTDLSPDLTWGQWGVSVSY-KTTSWLWRKYVSGINESTEFVLK--ELLEELSEELLITHYKSVQYEKTDYVVPWNVLKTYKLKNKVISEDTLICLVGHLKNQGKCKIGISEDNEKIVKFKQKSQSKVDPVTSFDFETVKLKRAIAKLTLDSKSIEKDLQQLKKHAQTLVKTNDRIQAKKVLAQRHKLEKKLRTNQNALFTMKDHLGMVQETETTKLITDAFNSSATLLNQTYKKQGLTVEHIESVIDKAAEANEMAREVSDALSGGLKQLEDEEFDMDELERELEQLDVTQGDESTAAFGLPQVPNHSPTKTSTP 409
            DEER +FL+S F   + +N   WDSK+ FW+  V+     Q  + +  R LQE F  +R    P GL  V+  L + G+L  ++D    S D +W  WGV V   K   W     +       E VL   ELL+E +EE+   +  S     +  VV  + L T    N    E T   ++  L+ + +  + + ++ EKIVKF +  ++KV PV   D    +L ++   L+   +S+ ++ ++ K+ A+   +   +  A + L  + + EK++      L T++  L  +  ++T +++ +A+ +    L  + K   +TVE  ES++D+  E  +   EVS  L+GG+    D  FD +ELE+E   LD+   D +     LP  P +     S P
Sbjct:   27 DEERMSFLFSAFKRSREVNSTDWDSKMGFWAPLVLSHSRRQGVVRLRLRDLQEAF--QRKGSVPLGLATVLQDLLRRGELQRESDFM-ASVDSSWISWGVGVFLLKPLKWTLSNMLGDNKVPAEEVLVAVELLKEKAEEVYRLYQNSPL--SSHPVVALSELSTL-CANSCPDERTFYLVLLQLQKEKRVTV-LEQNGEKIVKFARGPRAKVSPVNDVDVGVYQLMQSEQLLSRKVESLSQEAERCKEEARRACRAGKKQLALRSLKAKQRTEKRIEALHAKLDTVQGILDRIYASQTDQMVFNAYQAGVGALKLSMKD--VTVEKAESLVDQIQELCDTQDEVSQTLAGGVTNGLD--FDSEELEKE---LDILLQDTTKEPLDLPDNPRNRHFTNSVP 412
The following BLAST results are available for this feature:
BLAST of TCONS_00008411-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
CHMP71.823e-3428.25Charged multivesicular body protein 7 OS=Homo sapi... [more]
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