TCONS_00008434-protein (polypeptide) - C. hemisphaerica

Overview


Name	TCONS_00008434-protein
Unique Name	TCONS_00008434-protein
Type	polypeptide
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	312

Sequence

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>TCONS_00008434-protein ID=TCONS_00008434-protein|Name=TCONS_00008434-protein|organism=Clytia hemisphaerica|type=polypeptide|length=312bp
MSFGEGIQEKVETIGDFTVTIQEKEGEGKKIGSLVTFHDIGLNHNSYQKF
FQNEYNMQFYDKFVVYHIDMPGQQKGAEKFSAQYQFPSLSRMAEMLVPVM
EHFSLSDAIGLGVGAGAGVLIHLSMLKPELFLGIAVIDPAGKSPGFKEWG
EEKLAAWQLETKGFNSMTEKFLIWHLFGTKGKKVNMEMVDEHIKEITANQ
NPHNLAQYVKAYMNRTDVMNEAGQKIKCQVLIMTSAFSPYKEDAHAFKSK
LAIGKSSVLECTESINIFFEDPGKCGEGILLLMQGLGLVPTLRTRTASRG
GPVHRTASMCED

Run BLAST on NCBI

Gene-mRNA-Prot

This polypeptide comes from the following gene feature:


Feature Name	Unique Name	Species	Type
XLOC_004724	XLOC_004724	Clytia hemisphaerica	gene

This polypeptide derives from the following transcript feature(s):


Feature Name	Unique Name	Species	Type
TCONS_00008434	TCONS_00008434	Clytia hemisphaerica	transcript

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR029058	AB_hydrolase
IPR004142	NDRG

InterPro

Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR029058	Alpha/Beta hydrolase fold	GENE3D	3.40.50.1820		coord: 5..274 e-value: 1.5E-17 score: 63.5
IPR029058	Alpha/Beta hydrolase fold	SUPERFAMILY	53474	alpha/beta-Hydrolases	coord: 7..241
IPR004142	NDRG	PFAM	PF03096	Ndr	coord: 12..289 e-value: 1.5E-70 score: 237.0

Blast

[Close]

BLAST of TCONS_00008434-protein vs. Swiss-Prot (Human)
Match: NDRG1 (Protein NDRG1 OS=Homo sapiens GN=NDRG1 PE=1 SV=1)

HSP 1 Score: 152.14 bits (383), Expect = 4.339e-43
Identity = 93/306 (30.39%), Postives = 157/306 (51.31%), Query Frame = 0

Query:    8 QEKVETI-GDFTVTIQEKEGEGKKIGSLVTFHDIGLNHNS-YQKFFQNEYNMQFYDKFVVYHIDMPGQQKGAEKFSAQYQFPSLSRMAEMLVPVMEHFSLSDAIGLGVGAGAGVLIHLSMLKPELFLGIAVIDPAGKSPGFKEWGEEKLAAWQLETKGFNSMTEKFLIWHLFGTKGKKVNMEMVDEHIKEITANQNPHNLAQYVKAYMNRTDVMNEAGQ------KIKCQVLIMTSAFSPYKEDAHAFKSKLAIGKSSVLECTESINIF-FEDPGKCGEGILLLMQGLGLVPT------LRTRTAS 298
            ++ +ET+ G   VT+       + +  ++T+HDIG+NH + Y   F  E   +    F V H+D PGQQ GA  F A Y +PS+ ++AEML  V++ F L   IG+G GAGA +L   ++  PE+  G+ +I+    + G+ +W   K++ W   T+    M    ++ HLFG +  + N+E+V  + + I  + NP NL  ++ AY +R D+  E          ++C  L++    SP  +      SKL   K+++L+  +   +     P K  E     +QG+G +P+      +R+RTAS
Sbjct:   34 EQDIETLHGSVHVTLCGTPKGNRPV--ILTYHDIGMNHKTCYNPLFNYEDMQEITQHFAVCHVDAPGQQDGAASFPAGYMYPSMDQLAEMLPGVLQQFGLKSIIGMGTGAGAYILTRFALNNPEMVEGLVLINVNPCAEGWMDWAASKISGW---TQALPDM----VVSHLFGKEEMQSNVEVVHTYRQHIVNDMNPGNLHLFINAYNSRRDLEIERPMPGTHTVTLQCPALLVVGDSSPAVDAVVECNSKLDPTKTTLLKMADCGGLPQISQPAKLAEAFKYFVQGMGYMPSASMTRLMRSRTAS 330

The following BLAST results are available for this feature:

BLAST of TCONS_00008434-protein vs. Swiss-Prot (Human)

BLAST of TCONS_00008434-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
NDRG1	4.339e-43	30.39	Protein NDRG1 OS=Homo sapiens GN=NDRG1 PE=1 SV=1	[more]

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TCONS_00008434-protein (polypeptide) - C. hemisphaerica