TCONS_00008453-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00008453-protein
Unique NameTCONS_00008453-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length924

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00008453-protein ID=TCONS_00008453-protein|Name=TCONS_00008453-protein|organism=Clytia hemisphaerica|type=polypeptide|length=924bp
DESVERPADKIKSVLVLCVIFFILAILFFTFTRKKNRKVFAPRLLLLGTE
SSIKEGLFSWVTDAFSTKDEDIFMLAGMDALVFLRFMRLMLKFAVCSLPY
GICVLIPLNVHGGNGLDDGLEKMSMSNVEEKSAYLWAHWVAVYLYSILIL
VFCLQEWKVYISFRQRHLKNATSSDFAVLVKELPKNMTDDDTLYEFVNEL
FPNEVASVYVIRDLGKYXDESVERPADKIKSVLVLCVIFFILAILFFTFT
RKKNRKVFAPRLLLLGTESSIKEGLFSWVTDAFSTKDEDIFMLAGMDALV
FLRFMRLMLKFAVCSLPYGICVLIPLNVHGGNGLDDGLEKMSMSNVEEKS
AYLWAHWVAVYLYSILILVFCLQEWKVYISFRQRHLKNATSSDFAVLVKE
LPKNMTDDDTLYEFVNELFPNEVASVYVIRDLGKYKTLVEKHDLTVLQWE
DSKFFDDSNDEKKMMTKGCCCFGEKVEATQEYEKQLEILQGDLTTEKTEG
NRNPMNCAFVVFKSIKAKELALKSTWTNNPIDYQPCAAPTVKETLWCALK
LNYYVRLALEAIGYVIVFLLVLFWAIPITFAASIAKLDSLAKEVPWINDI
LNALSPGFVNFVQGLLPVILIAVFFALLPLILFLIARLQGNYSTKICAEL
VFKYMFIFQTVNSFFIYVLSGSIIQQISSIAQDPFQIPNLLAKSLPSQSG
FYINYLAFATFIGYCMTLTRIVPMIIIWLKLKWLAKTPRQRLEAWKPPRA
VYELLFSKALLFFLVGLSYSVLSPIIVPFVIIFFGFGYVVYLYQLTHVYM
PEFDHGGRFWIYIFNRIMVIVFLFQLLMVGVFLLKEGFTAGILVVPLIVC
TIFFWIYVNNKFEKISLYLTLKESVGMKNGYQERLDDLKNSYILDHSVPE
IFAVSTDKAQTEEESMNDETSRLL
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_004728XLOC_004728Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00008453TCONS_00008453Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003864RSN1_7TM
IPR032880Csc1_N
IPR027815PHM7_cyt
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0016020 membrane
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 479..499
NoneNo IPR availableCOILSCoilCoilcoord: 924..924
NoneNo IPR availableGENE3D3.30.70.330coord: 380..541
e-value: 0.0016
score: 18.0
IPR003864Calcium-dependent channel, 7TM region, putative phosphatePFAMPF02714RSN1_7TMcoord: 562..832
e-value: 3.1E-70
score: 236.6
IPR032880Calcium permeable stress-gated cation channel 1, N-terminal transmembrane domainPFAMPF13967RSN1_TMcoord: 14..156
e-value: 3.5E-36
score: 124.2
coord: 232..374
e-value: 3.5E-36
score: 124.2
IPR02781510TM putative phosphate transporter, cytosolic domainPFAMPF14703PHM7_cytcoord: 393..525
e-value: 1.3E-19
score: 71.0

Blast
[Close]
BLAST of TCONS_00008453-protein vs. Swiss-Prot (Human)
Match: CSCL2 (CSC1-like protein 2 OS=Homo sapiens GN=TMEM63B PE=1 SV=1)

HSP 1 Score: 110.538 bits (275), Expect = 1.253e-24
Identity = 142/640 (22.19%), Postives = 261/640 (40.78%), Query Frame = 0 
Query:  273 EGLFSWVTDAFSTKDEDIFMLAGMDALVFLRFMRLMLKFAVCSLPYGICVLIPLNVHG----GNGLDDGLEKMSMSNVEEKSAYLWAHWVAVYLYSILILVFCLQEWKVYISFRQRHLKNATSSDFAVLVKELPKNMTDDDTLYEFVNELFPN----EVASVYVIR-----DLGKYKTLVEKHDLTVLQWEDSKFFDDSNDEKKMMTKGCCCF---GEKVEATQEYEKQLEILQGDLTTEKTEGNRNPMNCAFVVFKSIKAKELALKSTWTNNPIDYQPCA-----------------------APTVKETLWCALKLNYYVRLALEAIGYVIVFLLVLFWAIPITFAASIAKLDSLAKEVPWINDILNALSPGFVNFVQGLLPVILIAVFFALLPLILFLIARLQGNYSTKICAELVFKYMFIF-------------QTVNSFFIYVLSGSIIQQISSIAQDPFQIPNLLAKSLPSQSGFYINYLAFATFIGYCMTLTRIVPMIIIWLKLKWLAKTPRQRLEAWKPPRAVYELLFSKA----LLFFLVGLSYSVLSPIIVPFVIIFFGFGYVVYLYQLTHVYMP-EFD---HGGRFWIYIFNRIMVIVFL--FQLLMVGVFLLKEGFTAGILVVPLIVC 850
             G  SW+T  F  KD++I    G DA+ +L F R ++   V      + +++P+N  G     N    G  + +++N++  +  LW H    +LY +L+ V+ ++     + +++  L   T     + +  + K   + + + +   E +PN    E    Y +      D  + K    K   T LQ   SK    +    K     CCC     E+VEA + Y K  + L+ D   EK + N  P+  AFV F +     + LK     N    Q C                        AP  +   W  L +  ++      +  V++F+L+ F   P     ++ K + + K V ++N+ +          +    P +L+  F ALLP I++  A  + +++            + F              +++ FF ++     + + +   +  F         LP    F++NY+  + FIG  M L RI P +++++    LA++  +R    +     YE  F  A    +  F V ++YS+  PIIVPF +++    ++V  Y L + Y+P + D   H G     +   I+ + +L  F  +  G       FT  +LV+ +++C
Sbjct:  123 NGFCSWLTAIFRIKDDEIRDKCGGDAVHYLSFQRHIIGLLVVVGVLSVGIVLPVNFSGDLLENNAYSFG--RTTIANLKSGNNLLWLHTSFAFLY-LLLTVYSMRRHTSKMRYKEDDLVKRT-----LFINGISK-YAESEKIKKHFEEAYPNCTVLEARPCYNVARLMFLDAERKKAERGKLYFTNLQ---SKENVPTMINPKPCGHLCCCVVRGCEQVEAIEYYTKLEQKLKEDYKREKEKVNEKPLGMAFVTFHNETITAIILKDF---NVCKCQGCTCRGEPRPSSCSESLHISNWTVSYAPDPQNIYWEHLSIRGFIWWLRCLVINVVLFILLFFLTTPAIIITTMDKFN-VTKPVEYLNNPI----------ITQFFPTLLLWCFSALLPTIVYYSAFFEAHWTRSGENRTTMHKCYTFLIFMVLLLPSLGLSSLDLFFRWLFDKKFLAEAAIRFECVF---------LPDNGAFFVNYVIASAFIGNAMDLLRI-PGLLMYMIRLCLARSAAERRNVKR--HQAYEFQFGAAYAWMMCVFTVVMTYSITCPIIVPFGLMYMLLKHLVDRYNLYYAYLPAKLDKKIHSGAVNQVVAAPILCLFWLLFFSTMRTGFLAPTSMFTFVVLVITIVIC 724
The following BLAST results are available for this feature:
BLAST of TCONS_00008453-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
CSCL21.253e-2422.19CSC1-like protein 2 OS=Homo sapiens GN=TMEM63B PE=... [more]
back to top