TCONS_00008534-protein (polypeptide) - C. hemisphaerica

Overview


Name	TCONS_00008534-protein
Unique Name	TCONS_00008534-protein
Type	polypeptide
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	317

Sequence

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>TCONS_00008534-protein ID=TCONS_00008534-protein|Name=TCONS_00008534-protein|organism=Clytia hemisphaerica|type=polypeptide|length=317bp
MKPYNSLSVLLFGMVLACVILIFRMSELKDIFSFLTLTRIKPTEEGPSTK
YTSETQQTRHDQLQKFCATHQNIHYTRKYDANLMYSRKQKIMYCHIPKVA
CSTWKKIMAYFLGLLKSPWKDVTLAELYGFDIPSFQTASNLTINQIKSNK
NYYSFMFARHPYDRLFSAYRNKFLDPVNLGYLKHYGPMIISMDVNPLSHR
KRSDGLYRITFEQFVKFVIKAGPDFDDHWRPQTRICHICDLKYKYLGKFE
TMENDANYIFKTLNESLKFPKMAEYKLKTTQILKKYYTELPKPLMTQIFE
FYRNDFDAFGYDPNYFF

Run BLAST on NCBI

Gene-mRNA-Prot

This polypeptide comes from the following gene feature:


Feature Name	Unique Name	Species	Type
XLOC_004778	XLOC_004778	Clytia hemisphaerica	gene

This polypeptide derives from the following transcript feature(s):


Feature Name	Unique Name	Species	Type
TCONS_00008534	TCONS_00008534	Clytia hemisphaerica	transcript

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR005331	Sulfotransferase

Vocabulary: **Molecular Function**
Term	Definition
GO:0008146	sulfotransferase activity

Vocabulary: **Cellular Component**
Term	Definition
GO:0016021	integral component of membrane

GO Annotation

GO Assignments

This polypeptide is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0008146	sulfotransferase activity

InterPro

Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR005331	Sulfotransferase	PFAM	PF03567	Sulfotransfer_2	coord: 83..312 e-value: 1.5E-38 score: 133.1
None	No IPR available	PROSITE	PS51257	PROKAR_LIPOPROTEIN	coord: 1..18 score: 5.0

Blast

[Close]

BLAST of TCONS_00008534-protein vs. Swiss-Prot (Human)
Match: CHSTB (Carbohydrate sulfotransferase 11 OS=Homo sapiens GN=CHST11 PE=1 SV=1)

HSP 1 Score: 134.806 bits (338), Expect = 8.487e-37
Identity = 83/282 (29.43%), Postives = 142/282 (50.35%), Query Frame = 0

Query:   52 TSETQQTRHDQLQKFCATHQNIHYTRKYDA-----NLMYSRKQKIMYCHIPKVACSTWKKIMAYFLGLLKSPWKD-VTLAELYGFDIPSFQTASNLTINQIKSN-KNYYSFMFARHPYDRLFSAYRNKFLDPVNLGYLKHYGPMIISM---DVNPLSHRKRSDGLYRITFEQFVKFVI----KAGPDFDDHWRPQTRICHICDLKYKYLGKFETMENDANYIFK--TLNESLKFPKMAEYKLKTTQILKKYYTELPKPLMTQIFEFYRNDFDAFGYD-PNYF 316
            T+   Q R DQ+   C  +      R+        +L+     +++YC++PKVAC+ WK++M    G  +  + D + +         + +T +  +I +I    K+Y  F+F R P++RL SAYRNKF    N+ + K YG  II     +    + RK  D    + FE+FV ++I    +    F++HW+    +CH C + Y  +GK+ET+E D+NY+ +   +   LKFP  A+    T ++  +++  +     TQ++E Y+ DF  F Y  P+Y 
Sbjct:   74 TAVLHQMRRDQVTDTCRANSATSRKRRVLTPNDLKHLVVDEDHELIYCYVPKVACTNWKRLMMVLTG--RGKYSDPMEIPANEAHVSANLKTLNQYSIPEINHRLKSYMKFLFVREPFERLVSAYRNKFTQKYNISFHKRYGTKIIKRQRKNATQEALRKGDD----VKFEEFVAYLIDPHTQREEPFNEHWQTVYSLCHPCHIHYDLVGKYETLEEDSNYVLQLAGVGSYLKFPTYAKSTRTTDEMTTEFFQNISSEHQTQLYEVYKLDFLMFNYSVPSYL 349

The following BLAST results are available for this feature:

BLAST of TCONS_00008534-protein vs. Swiss-Prot (Human)

BLAST of TCONS_00008534-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
CHSTB	8.487e-37	29.43	Carbohydrate sulfotransferase 11 OS=Homo sapiens G...	[more]

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TCONS_00008534-protein (polypeptide) - C. hemisphaerica