TCONS_00008599-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00008599-protein
Unique NameTCONS_00008599-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length406

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00008599-protein ID=TCONS_00008599-protein|Name=TCONS_00008599-protein|organism=Clytia hemisphaerica|type=polypeptide|length=406bp
MVAMSLLIENLSSSIVGHDLHSRHHHGGLRVKSECSDLIDGIEDMENEIV
MTRSGNTTSVIGSLSGVNLSGTLDHHSSNSSTKDNNNNTNSNNNNSSSSS
ANDKDTATNDKDPNVKPPYSYVALIAMAIKNAPDKRLTLNQIYQFIIEKF
PFYEKNKKGWQNSIRHNLSLNECFIKVPREGGGERKGNYWTLDPACEYMF
EDGNYRRRRRMKRPYRQSSHYPYPNGFYGGDFRYGAYSCYSSNWQSLYHS
GATSHPNWRNSTSFNYPSSSHTSNFSYIDPTAHHNLPATGYGAPYYGTNS
SSSSLGTTYQGTYQPQYYTGATSSTYGSSTTTYGSSITTPSTVGYSQSAY
ATSTTAYKSDSHPTTNYHEQYWAQPSSSTPSTGGNTTPQTGVLKSNYTTD
SPPSLM
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_004809XLOC_004809Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00008599TCONS_00008599Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001766Fork_head_dom
IPR011991WHTH_DNA-bd_dom
IPR018122TF_fork_head_CS_1
IPR030456TF_fork_head_CS_2
Vocabulary: Molecular Function
TermDefinition
GO:0003700transcription factor activity, sequence-specific DNA binding
GO:0043565sequence-specific DNA binding
Vocabulary: Biological Process
TermDefinition
GO:0006355regulation of transcription, DNA-templated
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006355 regulation of transcription, DNA-templated
molecular_function GO:0043565 sequence-specific DNA binding
molecular_function GO:0003700 transcription factor activity, sequence-specific DNA binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001766Fork head domainPRINTSPR00053FORKHEADcoord: 137..154
score: 50.71
coord: 116..129
score: 74.09
coord: 160..177
score: 79.54
IPR001766Fork head domainSMARTSM00339forkneu4coord: 114..204
e-value: 2.9E-60
score: 216.2
IPR001766Fork head domainPFAMPF00250Forkheadcoord: 116..200
e-value: 7.6E-39
score: 131.8
IPR001766Fork head domainPROSITEPS50039FORK_HEAD_3coord: 116..210
score: 38.82
IPR011991Winged helix-turn-helix DNA-binding domainGENE3D1.10.10.10coord: 99..203
e-value: 4.1E-41
score: 138.7
IPR011991Winged helix-turn-helix DNA-binding domainSUPERFAMILY46785"Winged helix" DNA-binding domaincoord: 115..210
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 372..406
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 71..115
NoneNo IPR availableCDDcd00059FHcoord: 116..193
e-value: 1.6144E-47
score: 157.716
IPR018122Fork head domain conserved site1PROSITEPS00657FORK_HEAD_1coord: 116..129
IPR030456Fork head domain conserved site 2PROSITEPS00658FORK_HEAD_2coord: 160..166

Blast
[Close]
BLAST of TCONS_00008599-protein vs. Swiss-Prot (Human)
Match: FOXL2 (Forkhead box protein L2 OS=Homo sapiens GN=FOXL2 PE=1 SV=1)

HSP 1 Score: 184.111 bits (466), Expect = 2.457e-54
Identity = 83/100 (83.00%), Postives = 88/100 (88.00%), Query Frame = 0 
Query:  106 TATNDKDPNVKPPYSYVALIAMAIKNAPDKRLTLNQIYQFIIEKFPFYEKNKKGWQNSIRHNLSLNECFIKVPREGGGERKGNYWTLDPACEYMFEDGNY 205
            TA    DP  KPPYSYVALIAMAI+ + +KRLTL+ IYQ+II KFPFYEKNKKGWQNSIRHNLSLNECFIKVPREGGGERKGNYWTLDPACE MFE GNY
Sbjct:   44 TAPEKPDPAQKPPYSYVALIAMAIRESAEKRLTLSGIYQYIIAKFPFYEKNKKGWQNSIRHNLSLNECFIKVPREGGGERKGNYWTLDPACEDMFEKGNY 143
The following BLAST results are available for this feature:
BLAST of TCONS_00008599-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
FOXL22.457e-5483.00Forkhead box protein L2 OS=Homo sapiens GN=FOXL2 P... [more]
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