TCONS_00008634-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00008634-protein
Unique NameTCONS_00008634-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length296

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00008634-protein ID=TCONS_00008634-protein|Name=TCONS_00008634-protein|organism=Clytia hemisphaerica|type=polypeptide|length=296bp
MGKLWNQLKKWSGINELRTLNFYRALLAEAVASGIYVFIAAGQLVPMNGA
DKQISRLHGALTTALSVACIASAFWEISGGHFNPAVSLTLMILRKISPVR
FIFYVVAQCLGSAGGAALLYAVTPPKFRPSDAQGVLGSIFVHEEVGSGMA
VVIEVVLTYQFIFVVISSTDPIRNMNGFQAPFAIGLSVGIGLLMGVPFSG
GALNPIRVFGPAVVMGKLEHHWVYWVGDMLGAALAALTYEFVFTLKIDDQ
DKEEDVNKSRKHRRHHRDLEYSVRSESAELENYEDSVIGNKMTAMT
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_004834XLOC_004834Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00008634TCONS_00008634Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000425MIP
IPR023271Aquaporin-like
IPR022357MIP_CS
Vocabulary: Molecular Function
TermDefinition
GO:0005215transporter activity
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Vocabulary: Biological Process
TermDefinition
GO:0006810transport
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006810 transport
cellular_component GO:0016020 membrane
molecular_function GO:0005215 transporter activity
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000425Major intrinsic proteinPRINTSPR00783MINTRINSICPcoord: 24..43
score: 29.54
coord: 222..242
score: 43.36
coord: 185..207
score: 36.12
coord: 153..171
score: 29.93
coord: 100..119
score: 42.5
coord: 63..87
score: 40.22
IPR000425Major intrinsic proteinPFAMPF00230MIPcoord: 16..239
e-value: 8.3E-55
score: 185.9
IPR000425Major intrinsic proteinCDDcd00333MIPcoord: 24..242
e-value: 2.08559E-55
score: 180.142
IPR023271Aquaporin-likeGENE3D1.20.1080.10coord: 12..263
e-value: 9.8E-65
score: 217.6
IPR023271Aquaporin-likeSUPERFAMILY81338Aquaporin-likecoord: 16..250
IPR022357Major intrinsic protein, conserved sitePROSITEPS00221MIPcoord: 81..89

Blast
[Close]
BLAST of TCONS_00008634-protein vs. Swiss-Prot (Human)
Match: AQP4 (Aquaporin-4 OS=Homo sapiens GN=AQP4 PE=1 SV=2)

HSP 1 Score: 178.333 bits (451), Expect = 5.519e-54
Identity = 97/271 (35.79%), Postives = 148/271 (54.61%), Query Frame = 0 
Query:   19 TLNFYRALLAEAVASGIYVFIAAGQLVPMNGADKQ--ISRLHGALTTALSVACIASAFWEISGGHFNPAVSLTLMILRKISPVRFIFYVVAQCLGSAGGAALLYAVTPPKFRPSDAQGVLGSIFVHEEVGSGMAVVIEVVLTYQFIFVVISSTDPIRNMNGFQAPFAIGLSVGIGLLMGVPFSGGALNPIRVFGPAVVMGKLEHHWVYWVGDMLGAALAALTYEFVFTLKIDDQDKEEDVNKSRKHRRHHRDLEYSVRSESAELENYEDSV 287
            T  F++A+ AE +A  I+V ++ G  +   G +K   +  +  +L   LS+A +   F  ISGGH NPAV++ ++  RKIS  + +FY+ AQCLG+  GA +LY VTPP        G LG   VH  + +G  +++E+++T+Q +F + +S D  R         AIG SV IG L  + ++G ++NP R FGPAV+MG  E+HW+YWVG ++GA LA   YE+VF           DV   R+ +          +    E+E+    V
Sbjct:   31 TQAFWKAVTAEFLAMLIFVLLSLGSTINWGGTEKPLPVDMVLISLCFGLSIATMVQCFGHISGGHINPAVTVAMVCTRKISIAKSVFYIAAQCLGAIIGAGILYLVTPP-----SVVGGLGVTMVHGNLTAGHGLLVELIITFQLVFTIFASCDSKRTDVTGSIALAIGFSVAIGHLFAINYTGASMNPARSFGPAVIMGNWENHWIYWVGPIIGAVLAGGLYEYVFC---------PDVEFKRRFKEAFSKAAQQTKGSYMEVEDNRSQV 287
The following BLAST results are available for this feature:
BLAST of TCONS_00008634-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
AQP45.519e-5435.79Aquaporin-4 OS=Homo sapiens GN=AQP4 PE=1 SV=2[more]
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