TCONS_00008652-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00008652-protein
Unique NameTCONS_00008652-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length151

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00008652-protein ID=TCONS_00008652-protein|Name=TCONS_00008652-protein|organism=Clytia hemisphaerica|type=polypeptide|length=151bp
MEKDTTIQTQEADVQRYREAFRLFDIHDTGDIRLDELKEVLKNLGVEASD
DDISRRLAEVDIRNNGVINFDEFVRFVSKGNTEMTPADEMRQMFRIFDPD
QKGYVTKDELKVVLNKLGLPFTEQQIKGMLDYADIAGDGRINYYEFIQMM
R
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_004852XLOC_004852Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00008652TCONS_00008652Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002048EF_hand_dom
IPR011992EF-hand-dom_pair
Vocabulary: Molecular Function
TermDefinition
GO:0005509calcium ion binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005509 calcium ion binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002048EF-hand domainSMARTSM00054efh_1coord: 89..117
e-value: 5.5E-5
score: 32.6
coord: 16..44
e-value: 1.8
score: 15.7
coord: 52..80
e-value: 3.7
score: 13.2
coord: 125..151
e-value: 16.0
score: 8.1
IPR002048EF-hand domainPFAMPF13499EF-hand_7coord: 89..151
e-value: 1.8E-13
score: 50.6
coord: 16..77
e-value: 1.2E-9
score: 38.4
IPR002048EF-hand domainPROSITEPS50222EF_HAND_2coord: 121..151
score: 11.64
IPR002048EF-hand domainPROSITEPS50222EF_HAND_2coord: 12..47
score: 11.891
IPR002048EF-hand domainPROSITEPS50222EF_HAND_2coord: 85..120
score: 14.123
IPR002048EF-hand domainPROSITEPS50222EF_HAND_2coord: 48..83
score: 10.134
IPR002048EF-hand domainCDDcd00051EFhcoord: 16..78
e-value: 3.36943E-11
score: 54.0909
IPR002048EF-hand domainCDDcd00051EFhcoord: 89..151
e-value: 5.64802E-15
score: 64.4913
NoneNo IPR availableGENE3D1.10.238.10coord: 42..65
e-value: 2.3E-12
score: 46.3
NoneNo IPR availableGENE3D1.10.238.10coord: 104..151
e-value: 1.2E-18
score: 66.3
NoneNo IPR availableGENE3D1.10.238.10coord: 5..41
e-value: 6.0E-9
score: 35.2
NoneNo IPR availableGENE3D1.10.238.10coord: 66..103
e-value: 6.0E-17
score: 60.7
IPR011992EF-hand domain pairSUPERFAMILY47473EF-handcoord: 12..150

Blast
[Close]
BLAST of TCONS_00008652-protein vs. Swiss-Prot (Human)
Match: CALM3 (Calmodulin-3 OS=Homo sapiens GN=CALM3 PE=1 SV=1)

HSP 1 Score: 107.071 bits (266), Expect = 2.316e-30
Identity = 53/143 (37.06%), Postives = 86/143 (60.14%), Query Frame = 0 
Query:    8 QTQEADVQRYREAFRLFDIHDTGDIRLDELKEVLKNLGVEASDDDISRRLAEVDIRNNGVINFDEFVRFVSKGNTEMTPADEMRQMFRIFDPDQKGYVTKDELKVVLNKLGLPFTEQQIKGMLDYADIAGDGRINYYEFIQMM 150
            Q  E  +  ++EAF LFD    G I   EL  V+++LG   ++ ++   + EVD   NG I+F EF+  +++   +    +E+R+ FR+FD D  GY++  EL+ V+  LG   T++++  M+  ADI GDG++NY EF+QMM
Sbjct:    4 QLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMM 146
The following BLAST results are available for this feature:
BLAST of TCONS_00008652-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
CALM32.316e-3037.06Calmodulin-3 OS=Homo sapiens GN=CALM3 PE=1 SV=1[more]
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