TCONS_00009096-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00009096-protein
Unique NameTCONS_00009096-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length382

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00009096-protein ID=TCONS_00009096-protein|Name=TCONS_00009096-protein|organism=Clytia hemisphaerica|type=polypeptide|length=382bp
RISPDEIQSSHDWDIEFKMSGQDINPFASPEDVNPFAGADSPNTDSKVDM
TNEFNPFAVQNEPPPQATPTSPANKPKSPTFSDSPAPVYQAQSTPKPVSS
PATIEPAWMNPSPVVKQQQPQQQSSSFRGYGSTTDDMQQKQEELDRKAEE
LDRKEAELRKRQADGDGRNNFPPLPKCCCVGPCFYHDINMDIPVEYQRTC
RMLFISWQLYVLALFMNVLSALAGVIEGYDDTPMLFGIALLYFVLFPIMS
FVCWYRPVYKALRSNSSFNFFMFFFVFFCQTVLMFVYALGINSMGTCGWI
NASKIASGGNHGVSIMFFITAALFTLLVFVYAYLLRRVHQIFRSSGATMQ
KAQKEFAEGMASNKTVQKAAVDTVAAGIASQP
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_005097XLOC_005097Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00009096TCONS_00009096Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR007273SCAMP
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
Vocabulary: Biological Process
TermDefinition
GO:0015031protein transport
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0015031 protein transport
cellular_component GO:0016021 integral component of membrane
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 134..164
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..167
IPR007273SCAMPPFAMPF04144SCAMPcoord: 168..344
e-value: 4.1E-57
score: 193.2

Blast
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BLAST of TCONS_00009096-protein vs. Swiss-Prot (Human)
Match: SCAM2 (Secretory carrier-associated membrane protein 2 OS=Homo sapiens GN=SCAMP2 PE=1 SV=2)

HSP 1 Score: 224.557 bits (571), Expect = 8.713e-71
Identity = 136/354 (38.42%), Postives = 199/354 (56.21%), Query Frame = 0 
Query:   19 MSGQDINPFASPEDVNPFAGADSPN-TDSKVDMTNEFNPFAVQNEPPPQATPTSPANKPKSPTFSDSPAPVYQAQSTPKPVSSPATIEPAWMNPSPVVKQQQPQQQSSSFRGYGSTTDDMQQKQEELDRKAEELDRKEAELRKRQADGDGR-NNFPPLPKCCCVGPCFYHDINMDIPVEYQRTCRMLFISWQLYVLALFMNVLSALAGVIEGYDDTPMLFGIALLYFVLFPIMSFVCWYRPVYKALRSNSSFNFFMFFFVFFCQTVLMFVYALGINSMGTCGWINASKIASGGNHGVSIMFFITAALFTLLVFVYAYLLRRVHQIFRSSGATMQKAQKEFAEGMASNKTVQKAA 370
            MS  D NPFA P DVNPF        T++      EFNPF                    S T + +  PV Q   + +P     ++EP    P  VV   Q                 + ++QEELDRKA EL+RKE EL+   A+   R NN+PPLP  C V PCFY D + +IP +YQR C+ML+  W L+ + LF+N+L+ LA    G     + FG+++L+F++F   +F+CWYRP+YKA RS++SF+FF+FFFVFFCQ  +  +  +GI  +G  GWI A       +  +S++  + A  FTL   +  +LL+RVH ++R +GA+ Q+AQ+EF++G+ S++T  +AA
Sbjct:    1 MSAFDTNPFADPVDVNPFQDPSVTQLTNAPQGGLAEFNPF--------------------SETNAATTVPVTQLPGSSQPAVLQPSVEPTQPTPQAVVSAAQA---------------GLLRQQEELDRKAAELERKERELQNTVANLHVRQNNWPPLPSWCPVKPCFYQDFSTEIPADYQRICKMLYYLWMLHSVTLFLNLLACLAW-FSGNSSKGVDFGLSILWFLIFTPCAFLCWYRPIYKAFRSDNSFSFFVFFFVFFCQIGIYIIQLVGIPGLGDSGWIAALSTLDNHSLAISVIMMVVAGFFTLCAVLSVFLLQRVHSLYRRTGASFQQAQEEFSQGIFSSRTFHRAA 318
The following BLAST results are available for this feature:
BLAST of TCONS_00009096-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
SCAM28.713e-7138.42Secretory carrier-associated membrane protein 2 OS... [more]
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